RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 KIF9Q9HAQ2 790 aa5.64□□□□□ -1.51
EPHA3-202ENST00000452448 PSD3Q9NYI0 1048 aa5.64□□□□□ -1.51
EPHA3-202ENST00000452448 PNMA3Q9UL41 463 aa5.64□□□□□ -1.51
EPHA3-202ENST00000452448 WDR7Q9Y4E6 1490 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 NEO1Q92859 1461 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 K7ELQ4 463 aaPredicted RBP5.63□□□□□ -1.51
EPHA3-202ENST00000452448 RASA4O43374 803 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 ATP9BO43861 1147 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 P4HBP07237 508 aaKnown RBP5.63□□□□□ -1.51
EPHA3-202ENST00000452448 ARID5AQ03989 594 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 TMEM62Q0P6H9 643 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 NEDD9Q14511 834 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 CNGA3Q16281 694 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 CRTC2Q53ET0 693 aaPredicted RBP5.63□□□□□ -1.51
EPHA3-202ENST00000452448 ESCO1Q5FWF5 840 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 MCF2L2Q86YR7 1114 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 RABGGTAQ92696 567 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 RNF34Q969K3 372 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 RUFY1Q96T51 708 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 BRD8Q9H0E9 1235 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 SEPT10Q9P0V9 454 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 CCDC7Q96M83 1385 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 ENPP3O14638 875 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 FIBPO43427 364 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 PPP2R5CQ13362 524 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 GNL2Q13823 731 aaKnown RBP5.63□□□□□ -1.51
EPHA3-202ENST00000452448 KAZNQ674X7 775 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 RIC3Q7Z5B4 369 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 NANOGNBQ7Z5D8 188 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 GBP7Q8N8V2 638 aaPredicted RBP5.63□□□□□ -1.51
EPHA3-202ENST00000452448 ZNF280CQ8ND82 737 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 TNIP2Q8NFZ5 429 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 EXOC6Q8TAG9 804 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 SLC35B4Q969S0 331 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 EXOC4Q96A65 974 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 CORO1BQ9BR76 489 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 DNAJC25Q9H1X3 360 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 PTPRHQ9HD43 1115 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 TPCN1Q9ULQ1 816 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 WDR37Q9Y2I8 494 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.63□□□□□ -1.51
EPHA3-202ENST00000452448 C2CD2Q9Y426 696 aa5.63□□□□□ -1.51
EPHA3-202ENST00000452448 FANCAO15360 1455 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 CGNL1Q0VF96 1302 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 SGSM2O43147 1006 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 OPA1O60313 960 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 STAM2O75886 525 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 RLBP1P12271 317 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 SCG2P13521 617 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 GLULP15104 373 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 RPL13P26373 211 aaKnown RBP5.62□□□□□ -1.51
EPHA3-202ENST00000452448 USP8P40818 1118 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 PAPOLAP51003 745 aaKnown RBP5.62□□□□□ -1.51
EPHA3-202ENST00000452448 ZBTB17Q13105 803 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 Q4G0T1 1027 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 TSHZ3Q63HK5 1081 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 CDCA2Q69YH5 1023 aaPredicted RBP5.62□□□□□ -1.51
EPHA3-202ENST00000452448 APPBP2Q92624 585 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 CCDC114Q96M63 670 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 TTC14Q96N46 770 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 NEK1Q96PY6 1258 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 TRIM4Q9C037 500 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 TSPY26PQ9H489 355 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 FANCFQ9NPI8 374 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 PCDHGB7Q9Y5F8 929 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 RPRD2Q5VT52 1461 aaKnown RBP5.62□□□□□ -1.51
EPHA3-202ENST00000452448 C2orf81A6NN90 581 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 ENO4A6NNW6 628 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 PIK3CDO00329 1044 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 CPP00450 1065 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 MYCP01106 439 aaPredicted RBP5.62□□□□□ -1.51
EPHA3-202ENST00000452448 PSMA3P25788 255 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 NF2P35240 595 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 NLRP12P59046 1061 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 PDE3BQ13370 1112 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 LBRQ14739 615 aaKnown RBP5.62□□□□□ -1.51
EPHA3-202ENST00000452448 KIAA1614Q5VZ46 1190 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 CAPRIN2Q6IMN6 1127 aaKnown RBP5.62□□□□□ -1.51
EPHA3-202ENST00000452448 PPP4R4Q6NUP7 873 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.62□□□□□ -1.51
EPHA3-202ENST00000452448 WHAMMQ8TF30 809 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 RPGRQ92834 1020 aaKnown RBP5.62□□□□□ -1.51
EPHA3-202ENST00000452448 JAKMIP2Q96AA8 810 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 EPSTI1Q96J88 318 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 SYNCQ9H7C4 482 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 PRKRIP1Q9H875 184 aaPredicted RBP5.62□□□□□ -1.51
EPHA3-202ENST00000452448 INPP5FQ9Y2H2 1132 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 SQORQ9Y6N5 450 aa5.62□□□□□ -1.51
EPHA3-202ENST00000452448 MED1Q15648 1581 aaPredicted RBP5.61□□□□□ -1.51
EPHA3-202ENST00000452448 GOLGA6L10A0A0M3HER8 536 aa5.61□□□□□ -1.51
EPHA3-202ENST00000452448 BTBD11A6QL63 1104 aa5.61□□□□□ -1.51
EPHA3-202ENST00000452448 FOXN3O00409 490 aaPredicted RBP5.61□□□□□ -1.51
EPHA3-202ENST00000452448 LSM1O15116 133 aaKnown RBP5.61□□□□□ -1.51
EPHA3-202ENST00000452448 MUSKO15146 869 aa5.61□□□□□ -1.51
EPHA3-202ENST00000452448 SART1O43290 800 aaKnown RBP5.61□□□□□ -1.51
EPHA3-202ENST00000452448 NDUFB5O43674 189 aa5.61□□□□□ -1.51
EPHA3-202ENST00000452448 LZTS3O60299 673 aaPredicted RBP5.61□□□□□ -1.51
EPHA3-202ENST00000452448 CEP104O60308 925 aa5.61□□□□□ -1.51
EPHA3-202ENST00000452448 LILRB3O75022 631 aa5.61□□□□□ -1.51
EPHA3-202ENST00000452448 RTN2O75298 545 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms