RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 RIMBP2O15034 1052 aa17■□□□□ 0.31
SF1-211ENST00000448404 TRIM37O94972 964 aa17■□□□□ 0.31
SF1-211ENST00000448404 FMR1Q06787 632 aaKnown RBP eCLIP17■□□□□ 0.311e-11■□□□□ 9.6
SF1-211ENST00000448404 NPY5RQ15761 445 aa17■□□□□ 0.31
SF1-211ENST00000448404 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17■□□□□ 0.31
SF1-211ENST00000448404 AFF2P51816 1311 aa17■□□□□ 0.31
SF1-211ENST00000448404 UFL1O94874 794 aa16.99■□□□□ 0.31
SF1-211ENST00000448404 TPD52L1Q16890 204 aaPredicted RBP16.99■□□□□ 0.31
SF1-211ENST00000448404 SARM1Q6SZW1 724 aa16.99■□□□□ 0.31
SF1-211ENST00000448404 PIK3AP1Q6ZUJ8 805 aa16.99■□□□□ 0.31
SF1-211ENST00000448404 NAT10Q9H0A0 1025 aaKnown RBP16.99■□□□□ 0.31
SF1-211ENST00000448404 LAMB2P55268 1798 aa16.99■□□□□ 0.31
SF1-211ENST00000448404 CASZ1Q86V15 1759 aa16.99■□□□□ 0.31
SF1-211ENST00000448404 LDHBP07195 334 aaKnown RBP16.99■□□□□ 0.31
SF1-211ENST00000448404 RC3H1Q5TC82 1133 aaKnown RBP16.99■□□□□ 0.31
SF1-211ENST00000448404 CLEC10AQ8IUN9 316 aa16.99■□□□□ 0.31
SF1-211ENST00000448404 JMYQ8N9B5 988 aa16.99■□□□□ 0.31
SF1-211ENST00000448404 STX8Q9UNK0 236 aa16.99■□□□□ 0.31
SF1-211ENST00000448404 CCDC196A0A1B0GTZ2 297 aa16.98■□□□□ 0.31
SF1-211ENST00000448404 CUTAO60888 179 aa16.98■□□□□ 0.31
SF1-211ENST00000448404 HSPA1LP34931 641 aa16.98■□□□□ 0.31
SF1-211ENST00000448404 CCZ1BP86790 482 aa16.98■□□□□ 0.31
SF1-211ENST00000448404 CCZ1P86791 482 aaPredicted RBP16.98■□□□□ 0.31
SF1-211ENST00000448404 SLC35G1Q2M3R5 365 aa16.98■□□□□ 0.31
SF1-211ENST00000448404 KLHL10Q6JEL2 608 aa16.98■□□□□ 0.31
SF1-211ENST00000448404 TYW1BQ6NUM6 668 aa16.98■□□□□ 0.31
SF1-211ENST00000448404 ARMCX5Q6P1M9 558 aa16.98■□□□□ 0.31
SF1-211ENST00000448404 MRFAP1L1Q96HT8 127 aa16.98■□□□□ 0.31
SF1-211ENST00000448404 IRS2Q9Y4H2 1338 aa16.98■□□□□ 0.31
SF1-211ENST00000448404 VWA3AA6NCI4 1184 aa16.98■□□□□ 0.31
SF1-211ENST00000448404 PTPREP23469 700 aa16.98■□□□□ 0.31
SF1-211ENST00000448404 STX17P56962 302 aa16.98■□□□□ 0.31
SF1-211ENST00000448404 TMTC3Q6ZXV5 915 aa16.98■□□□□ 0.31
SF1-211ENST00000448404 TMTC2Q8N394 836 aa16.98■□□□□ 0.31
SF1-211ENST00000448404 WASF1Q92558 559 aa16.98■□□□□ 0.31
SF1-211ENST00000448404 ANKRD2Q9GZV1 360 aa16.98■□□□□ 0.31
SF1-211ENST00000448404 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.98■□□□□ 0.31
SF1-211ENST00000448404 TIAM2Q8IVF5 1701 aa16.97■□□□□ 0.31
SF1-211ENST00000448404 CNTNAP5Q8WYK1 1306 aa16.97■□□□□ 0.31
SF1-211ENST00000448404 MCM7P33993 719 aa16.97■□□□□ 0.31
SF1-211ENST00000448404 FANCCQ00597 558 aa16.97■□□□□ 0.31
SF1-211ENST00000448404 MED15Q96RN5 788 aa16.97■□□□□ 0.31
SF1-211ENST00000448404 FOXP1Q9H334 677 aaPredicted RBP16.97■□□□□ 0.31
SF1-211ENST00000448404 DUOX1Q9NRD9 1551 aa16.97■□□□□ 0.31
SF1-211ENST00000448404 TNNT1P13805 278 aa16.97■□□□□ 0.31
SF1-211ENST00000448404 GRAPQ13588 217 aa16.97■□□□□ 0.31
SF1-211ENST00000448404 ZNF710Q8N1W2 664 aa16.97■□□□□ 0.31
SF1-211ENST00000448404 MYRIPQ8NFW9 859 aa16.97■□□□□ 0.31
SF1-211ENST00000448404 GRAPLQ8TC17 118 aaPredicted RBP16.97■□□□□ 0.31
SF1-211ENST00000448404 RPGRQ92834 1020 aaKnown RBP16.97■□□□□ 0.31
SF1-211ENST00000448404 PHF20Q9BVI0 1012 aa16.97■□□□□ 0.31
SF1-211ENST00000448404 RNF26Q9BY78 433 aaPredicted RBP16.97■□□□□ 0.31
SF1-211ENST00000448404 MAN1B1Q9UKM7 699 aa16.97■□□□□ 0.31
SF1-211ENST00000448404 FAM205AQ6ZU69 1335 aa16.96■□□□□ 0.31
SF1-211ENST00000448404 GYS1P13807 737 aa16.96■□□□□ 0.31
SF1-211ENST00000448404 MDM2Q00987 491 aaPredicted RBP16.96■□□□□ 0.31
SF1-211ENST00000448404 PLIN2Q99541 437 aa16.96■□□□□ 0.31
SF1-211ENST00000448404 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.96■□□□□ 0.31
SF1-211ENST00000448404 TUBE1Q9UJT0 475 aa16.96■□□□□ 0.31
SF1-211ENST00000448404 V9GYY5 206 aaPredicted RBP16.96■□□□□ 0.31
SF1-211ENST00000448404 SERPINB2P05120 415 aa16.96■□□□□ 0.31
SF1-211ENST00000448404 KRT2P35908 639 aa16.96■□□□□ 0.31
SF1-211ENST00000448404 RILPL1Q5EBL4 403 aa16.96■□□□□ 0.31
SF1-211ENST00000448404 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.96■□□□□ 0.31
SF1-211ENST00000448404 SMAP1Q8IYB5 467 aaPredicted RBP16.96■□□□□ 0.31
SF1-211ENST00000448404 CTCFLQ8NI51 663 aaPredicted RBP16.96■□□□□ 0.31
SF1-211ENST00000448404 SYMPKQ92797 1274 aaKnown RBP16.96■□□□□ 0.31
SF1-211ENST00000448404 BLZF1Q9H2G9 400 aa16.96■□□□□ 0.31
SF1-211ENST00000448404 MKNK2Q9HBH9 465 aa16.96■□□□□ 0.31
SF1-211ENST00000448404 SERPINC1P01008 464 aa16.95■□□□□ 0.3
SF1-211ENST00000448404 DDR1Q08345 913 aa16.95■□□□□ 0.3
SF1-211ENST00000448404 POSTNQ15063 836 aa16.95■□□□□ 0.3
SF1-211ENST00000448404 POLLQ9UGP5 575 aa16.95■□□□□ 0.3
SF1-211ENST00000448404 A0A1B0GUL6 1792 aa16.95■□□□□ 0.3
SF1-211ENST00000448404 SCN7AQ01118 1682 aa16.95■□□□□ 0.3
SF1-211ENST00000448404 TRIM75PA6NK02 468 aa16.95■□□□□ 0.3
SF1-211ENST00000448404 CAVIN2O95810 425 aa16.95■□□□□ 0.3
SF1-211ENST00000448404 EIF6P56537 245 aaKnown RBP16.95■□□□□ 0.3
SF1-211ENST00000448404 NLRP5P59047 1200 aa16.95■□□□□ 0.3
SF1-211ENST00000448404 CFAP100Q494V2 611 aa16.95■□□□□ 0.3
SF1-211ENST00000448404 C6orf229H3BNL8 230 aa16.94■□□□□ 0.3
SF1-211ENST00000448404 DYNC1I1O14576 645 aa16.94■□□□□ 0.3
SF1-211ENST00000448404 RBM6P78332 1123 aaKnown RBP16.94■□□□□ 0.3
SF1-211ENST00000448404 PTGDRQ13258 359 aa16.94■□□□□ 0.3
SF1-211ENST00000448404 VAT1LQ9HCJ6 419 aa16.94■□□□□ 0.3
SF1-211ENST00000448404 SAMSN1Q9NSI8 373 aaKnown RBP16.94■□□□□ 0.3
SF1-211ENST00000448404 PP2D1A8MPX8 630 aa16.94■□□□□ 0.3
SF1-211ENST00000448404 PRPF3O43395 683 aaKnown RBP16.94■□□□□ 0.3
SF1-211ENST00000448404 IL17AQ16552 155 aa16.94■□□□□ 0.3
SF1-211ENST00000448404 HOMER1Q86YM7 354 aa16.94■□□□□ 0.3
SF1-211ENST00000448404 INTS13Q9NVM9 706 aa16.94■□□□□ 0.3
SF1-211ENST00000448404 ACTN4O43707 911 aaKnown RBP16.94■□□□□ 0.3
SF1-211ENST00000448404 BTDP43251 543 aa16.94■□□□□ 0.3
SF1-211ENST00000448404 PICALMQ13492 652 aa16.94■□□□□ 0.3
SF1-211ENST00000448404 C12orf60Q5U649 245 aa16.94■□□□□ 0.3
SF1-211ENST00000448404 PNMA1Q8ND90 353 aa16.94■□□□□ 0.3
SF1-211ENST00000448404 TMX1Q9H3N1 280 aa16.94■□□□□ 0.3
SF1-211ENST00000448404 CD209Q9NNX6 404 aa16.94■□□□□ 0.3
SF1-211ENST00000448404 FGRP09769 529 aa16.93■□□□□ 0.3
SF1-211ENST00000448404 UBASH3AP57075 661 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms