RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 UNCXA6NJT0 531 aa8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 UBE2Q2LH0YL09 131 aa8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 ORC4O43929 436 aa8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 CTNND1O60716 968 aaKnown RBP8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 PRDM1O75626 825 aa8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 PCP11498 1178 aaKnown RBP8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 RASA1P20936 1047 aa8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 CAP2P40123 477 aa8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 TSGA10IPQ3SY00 556 aa8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 RNF20Q5VTR2 975 aa8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 TBC1D10CQ8IV04 446 aa8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 ZNF444Q8N0Y2 327 aaPredicted RBP8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 ZKSCAN4Q969J2 545 aaPredicted RBP8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 CCDC17Q96LX7 622 aa8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 WRNIP1Q96S55 665 aa8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 RNF41Q9H4P4 317 aaPredicted RBP8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 TAF6LQ9Y6J9 622 aa8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 ROBO3Q96MS0 1386 aa8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 FOCADQ5VW36 1801 aa8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 CDK5RAP2Q96SN8 1893 aa8.94□□□□□ -0.98
AC004540.1-206ENST00000448056 TMEM88BA6NKF7 163 aa8.93□□□□□ -0.98
AC004540.1-206ENST00000448056 E7EWF7 191 aa8.93□□□□□ -0.98
AC004540.1-206ENST00000448056 HOXB3P14651 431 aaPredicted RBP8.93□□□□□ -0.98
AC004540.1-206ENST00000448056 ZKSCAN1P17029 563 aaPredicted RBP8.93□□□□□ -0.98
AC004540.1-206ENST00000448056 INPP5BP32019 993 aa8.93□□□□□ -0.98
AC004540.1-206ENST00000448056 APLP1P51693 650 aa8.93□□□□□ -0.98
AC004540.1-206ENST00000448056 JAG1P78504 1218 aa8.93□□□□□ -0.98
AC004540.1-206ENST00000448056 NBR1Q14596 966 aa8.93□□□□□ -0.98
AC004540.1-206ENST00000448056 ABCB5Q2M3G0 1257 aa8.93□□□□□ -0.98
AC004540.1-206ENST00000448056 SAPCD2Q86UD0 394 aa8.93□□□□□ -0.98
AC004540.1-206ENST00000448056 ANKRD13AQ8IZ07 590 aa8.93□□□□□ -0.98
AC004540.1-206ENST00000448056 MYH1P12882 1939 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 BAZ2AQ9UIF9 1905 aaKnown RBP8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 DPYSL4O14531 572 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 RANBP6O60518 1105 aaKnown RBP8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 GDF11O95390 407 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 GH2P01242 217 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 AKR1B1P15121 316 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 MCCP23508 829 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 NT5C2P49902 561 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 TFAP4Q01664 338 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 TRDNQ13061 729 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 VGLL4Q14135 290 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 SHROOM1Q2M3G4 852 aaPredicted RBP8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 FAM47AQ5JRC9 791 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 RRP12Q5JTH9 1297 aaKnown RBP8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 NOL9Q5SY16 702 aaKnown RBP8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 STOX1Q6ZVD7 989 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 SCYL3Q8IZE3 742 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 NKX2-3Q8TAU0 364 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 ESR2Q92731 530 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 SLC10A4Q96EP9 437 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 CLMNQ96JQ2 1002 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 KRT23Q9C075 422 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 CNNM2Q9H8M5 875 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 CABP5Q9NP86 173 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 TOMM22Q9NS69 142 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 GINM1Q9NU53 330 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 ZSWIM5Q9P217 1185 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 SNX14Q9Y5W7 946 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 CSADQ9Y600 493 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 TLL2Q9Y6L7 1015 aa8.92□□□□□ -0.98
AC004540.1-206ENST00000448056 DDX60LQ5H9U9 1706 aaKnown RBP8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 NEDD4P46934 1319 aa8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 TSPY2A6NKD2 308 aa8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 SPDYE16A6NNV3 312 aaPredicted RBP8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 B4E1Z4 1266 aa8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 MPHOSPH10O00566 681 aaKnown RBP8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 KDM4AO75164 1064 aa8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 ASNSP08243 561 aa8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 TSPY3P0CV98 308 aa8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 TSPY8P0CW00 308 aa8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 PTPRAP18433 802 aa8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 GUCY1A2P33402 732 aa8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 HUNKP57058 714 aa8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 KRT32Q14532 448 aa8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 ADCK5Q3MIX3 580 aa8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 TMEM179Q6ZVK1 233 aa8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 NEDD1Q8NHV4 660 aa8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 NCOA7Q8NI08 942 aa8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 C22orf23Q9BZE7 217 aa8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 UPF2Q9HAU5 1272 aaKnown RBP8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 PICK1Q9NRD5 415 aa8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 TCP11L1Q9NUJ3 509 aa8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 ABT1Q9ULW3 272 aaKnown RBP8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 SNCAIPQ9Y6H5 919 aa8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 NAV1Q8NEY1 1877 aa8.91□□□□□ -0.98
AC004540.1-206ENST00000448056 IGKV6D-41A0A0C4DH26 115 aa8.9□□□□□ -0.98
AC004540.1-206ENST00000448056 USP17L5A8MUK1 530 aa8.9□□□□□ -0.98
AC004540.1-206ENST00000448056 ANAPC15P60006 121 aa8.9□□□□□ -0.98
AC004540.1-206ENST00000448056 SEPT2Q15019 361 aa8.9□□□□□ -0.98
AC004540.1-206ENST00000448056 RAB3GAP1Q15042 981 aa8.9□□□□□ -0.98
AC004540.1-206ENST00000448056 CYB5R4Q7L1T6 521 aa8.9□□□□□ -0.98
AC004540.1-206ENST00000448056 RALYLQ86SE5 291 aaKnown RBP8.9□□□□□ -0.98
AC004540.1-206ENST00000448056 ERO1BQ86YB8 467 aa8.9□□□□□ -0.98
AC004540.1-206ENST00000448056 SIAH1Q8IUQ4 282 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms