RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 MON2Q7Z3U7 1717 aa7.13□□□□□ -1.27
SDCBP-205ENST00000447267 NPHP1O15259 732 aa7.13□□□□□ -1.27
SDCBP-205ENST00000447267 EGFRP00533 1210 aa7.13□□□□□ -1.27
SDCBP-205ENST00000447267 BTLAQ7Z6A9 289 aa7.13□□□□□ -1.27
SDCBP-205ENST00000447267 ANKMY2Q8IV38 441 aa7.13□□□□□ -1.27
SDCBP-205ENST00000447267 MYLIPQ8WY64 445 aa7.13□□□□□ -1.27
SDCBP-205ENST00000447267 ERO1AQ96HE7 468 aa7.13□□□□□ -1.27
SDCBP-205ENST00000447267 BCL2L13Q9BXK5 485 aa7.13□□□□□ -1.27
SDCBP-205ENST00000447267 NEUROD4Q9HD90 331 aa7.13□□□□□ -1.27
SDCBP-205ENST00000447267 CNOT7Q9UIV1 285 aaKnown RBP7.13□□□□□ -1.27
SDCBP-205ENST00000447267 KCNH4Q9UQ05 1017 aa7.13□□□□□ -1.27
SDCBP-205ENST00000447267 MYH14Q7Z406 1995 aaKnown RBP7.13□□□□□ -1.27
SDCBP-205ENST00000447267 MUC3AQ02505 3323 aa7.12□□□□□ -1.27
SDCBP-205ENST00000447267 FURINP09958 794 aa7.12□□□□□ -1.27
SDCBP-205ENST00000447267 PHKG2P15735 406 aa7.12□□□□□ -1.27
SDCBP-205ENST00000447267 ITGB7P26010 798 aa7.12□□□□□ -1.27
SDCBP-205ENST00000447267 RRS1Q15050 365 aaKnown RBP7.12□□□□□ -1.27
SDCBP-205ENST00000447267 TBC1D10BQ4KMP7 808 aaPredicted RBP7.12□□□□□ -1.27
SDCBP-205ENST00000447267 FAM109BQ6ICB4 259 aaPredicted RBP7.12□□□□□ -1.27
SDCBP-205ENST00000447267 C20orf204Q6ZNR8 217 aa7.12□□□□□ -1.27
SDCBP-205ENST00000447267 DNAJC10Q8IXB1 793 aa7.12□□□□□ -1.27
SDCBP-205ENST00000447267 NIM1KQ8IY84 436 aa7.12□□□□□ -1.27
SDCBP-205ENST00000447267 TDHQ8IZJ6 230 aa7.12□□□□□ -1.27
SDCBP-205ENST00000447267 USP38Q8NB14 1042 aa7.12□□□□□ -1.27
SDCBP-205ENST00000447267 MPHOSPH9Q99550 1183 aa7.12□□□□□ -1.27
SDCBP-205ENST00000447267 EPHX3Q9H6B9 360 aa7.12□□□□□ -1.27
SDCBP-205ENST00000447267 SPG7Q9UQ90 795 aa7.12□□□□□ -1.27
SDCBP-205ENST00000447267 CACNA1SQ13698 1873 aa7.11□□□□□ -1.27
SDCBP-205ENST00000447267 CENPFP49454 3210 aa7.11□□□□□ -1.27
SDCBP-205ENST00000447267 NPC1L1Q9UHC9 1359 aa7.11□□□□□ -1.27
SDCBP-205ENST00000447267 RBBP6Q7Z6E9 1792 aaKnown RBP7.11□□□□□ -1.27
SDCBP-205ENST00000447267 CENPJQ9HC77 1338 aaPredicted RBP7.11□□□□□ -1.27
SDCBP-205ENST00000447267 NRXN2Q9P2S2 1712 aa7.11□□□□□ -1.27
SDCBP-205ENST00000447267 FAM196BA6NMK8 535 aa7.11□□□□□ -1.27
SDCBP-205ENST00000447267 M0R082 166 aa7.11□□□□□ -1.27
SDCBP-205ENST00000447267 NPR1P16066 1061 aa7.11□□□□□ -1.27
SDCBP-205ENST00000447267 SYN1P17600 705 aa7.11□□□□□ -1.27
SDCBP-205ENST00000447267 ADH7P40394 386 aa7.11□□□□□ -1.27
SDCBP-205ENST00000447267 MICALL1Q8N3F8 863 aa7.11□□□□□ -1.27
SDCBP-205ENST00000447267 ZNF417Q8TAU3 575 aa7.11□□□□□ -1.27
SDCBP-205ENST00000447267 DCPSQ96C86 337 aaKnown RBP7.11□□□□□ -1.27
SDCBP-205ENST00000447267 CDCA5Q96FF9 252 aa7.11□□□□□ -1.27
SDCBP-205ENST00000447267 NECAB3Q96P71 396 aaPredicted RBP7.11□□□□□ -1.27
SDCBP-205ENST00000447267 ZNF587Q96SQ5 575 aaPredicted RBP7.11□□□□□ -1.27
SDCBP-205ENST00000447267 PSMD1Q99460 953 aa7.11□□□□□ -1.27
SDCBP-205ENST00000447267 HINFPQ9BQA5 517 aa7.11□□□□□ -1.27
SDCBP-205ENST00000447267 LTN1O94822 1766 aa7.1□□□□□ -1.27
SDCBP-205ENST00000447267 RGPD2P0DJD1 1756 aa7.1□□□□□ -1.27
SDCBP-205ENST00000447267 ASTN2O75129 1339 aaPredicted RBP7.1□□□□□ -1.27
SDCBP-205ENST00000447267 FAM229AH3BQW9 127 aa7.1□□□□□ -1.27
SDCBP-205ENST00000447267 TCERG1O14776 1098 aaKnown RBP7.1□□□□□ -1.27
SDCBP-205ENST00000447267 RAD17O75943 681 aa7.1□□□□□ -1.27
SDCBP-205ENST00000447267 NID1P14543 1247 aa7.1□□□□□ -1.27
SDCBP-205ENST00000447267 IGFBP4P22692 258 aa7.1□□□□□ -1.27
SDCBP-205ENST00000447267 MAGEA10P43363 369 aaPredicted RBP7.1□□□□□ -1.27
SDCBP-205ENST00000447267 RTN1Q16799 776 aa7.1□□□□□ -1.27
SDCBP-205ENST00000447267 AOC3Q16853 763 aa7.1□□□□□ -1.27
SDCBP-205ENST00000447267 CDCA8Q53HL2 280 aa7.1□□□□□ -1.27
SDCBP-205ENST00000447267 IFNL2Q8IZJ0 200 aa7.1□□□□□ -1.27
SDCBP-205ENST00000447267 CNBD1Q8NA66 436 aa7.1□□□□□ -1.27
SDCBP-205ENST00000447267 BHMTQ93088 406 aa7.1□□□□□ -1.27
SDCBP-205ENST00000447267 UHRF1Q96T88 793 aaPredicted RBP7.1□□□□□ -1.27
SDCBP-205ENST00000447267 NOP53Q9NZM5 478 aaKnown RBP7.1□□□□□ -1.27
SDCBP-205ENST00000447267 KLK14Q9P0G3 267 aa7.1□□□□□ -1.27
SDCBP-205ENST00000447267 ANKIB1Q9P2G1 1089 aa7.1□□□□□ -1.27
SDCBP-205ENST00000447267 ZBTB1Q9Y2K1 713 aa7.1□□□□□ -1.27
SDCBP-205ENST00000447267 COL11A2P13942 1736 aaPredicted RBP7.1□□□□□ -1.27
SDCBP-205ENST00000447267 H7C1D1 291 aa7.09□□□□□ -1.27
SDCBP-205ENST00000447267 CANXP27824 592 aaKnown RBP7.09□□□□□ -1.27
SDCBP-205ENST00000447267 WEE1P30291 646 aa7.09□□□□□ -1.27
SDCBP-205ENST00000447267 ST5P78524 1137 aa7.09□□□□□ -1.27
SDCBP-205ENST00000447267 SREBF2Q12772 1141 aa7.09□□□□□ -1.27
SDCBP-205ENST00000447267 HSP90AB2PQ58FF8 381 aa7.09□□□□□ -1.27
SDCBP-205ENST00000447267 IER5Q5VY09 327 aa7.09□□□□□ -1.27
SDCBP-205ENST00000447267 GSX2Q9BZM3 304 aa7.09□□□□□ -1.27
SDCBP-205ENST00000447267 UBE2OQ9C0C9 1292 aaKnown RBP7.09□□□□□ -1.27
SDCBP-205ENST00000447267 SEMA6BQ9H3T3 888 aa7.09□□□□□ -1.27
SDCBP-205ENST00000447267 VRTNQ9H8Y1 702 aa7.09□□□□□ -1.27
SDCBP-205ENST00000447267 SCAF8Q9UPN6 1271 aaKnown RBP7.09□□□□□ -1.27
SDCBP-205ENST00000447267 CHMP3Q9Y3E7 222 aa7.09□□□□□ -1.27
SDCBP-205ENST00000447267 RBM19Q9Y4C8 960 aaKnown RBP7.09□□□□□ -1.27
SDCBP-205ENST00000447267 COL15A1P39059 1388 aa7.08□□□□□ -1.28
SDCBP-205ENST00000447267 SBNO2Q9Y2G9 1366 aa7.08□□□□□ -1.28
SDCBP-205ENST00000447267 TGFBR3LH3BV60 316 aa7.08□□□□□ -1.28
SDCBP-205ENST00000447267 PPIP5K2O43314 1243 aa7.08□□□□□ -1.28
SDCBP-205ENST00000447267 FARP2O94887 1054 aaPredicted RBP7.08□□□□□ -1.28
SDCBP-205ENST00000447267 CABP4P57796 275 aa7.08□□□□□ -1.28
SDCBP-205ENST00000447267 SP3Q02447 781 aa7.08□□□□□ -1.28
SDCBP-205ENST00000447267 PRAMEF18Q5VWM3 479 aa7.08□□□□□ -1.28
SDCBP-205ENST00000447267 C7orf61Q8IZ16 206 aa7.08□□□□□ -1.28
SDCBP-205ENST00000447267 NAGPAQ9UK23 515 aa7.08□□□□□ -1.28
SDCBP-205ENST00000447267 ANKRD31Q8N7Z5 1873 aa7.08□□□□□ -1.28
SDCBP-205ENST00000447267 PKD1L2Q7Z442 2459 aa7.08□□□□□ -1.28
SDCBP-205ENST00000447267 ZNF609O15014 1411 aa7.08□□□□□ -1.28
SDCBP-205ENST00000447267 MRC1P22897 1456 aa7.07□□□□□ -1.28
SDCBP-205ENST00000447267 PRAMEF22A3QJZ6 481 aa7.07□□□□□ -1.28
SDCBP-205ENST00000447267 FAM86C2PA6NEL3 165 aa7.07□□□□□ -1.28
SDCBP-205ENST00000447267 ERVV-2B6SEH9 535 aa7.07□□□□□ -1.28
SDCBP-205ENST00000447267 K7ELQ4 463 aaPredicted RBP7.07□□□□□ -1.28
SDCBP-205ENST00000447267 PIK3R2O00459 728 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms