RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 RTN3O95197 1032 aaPredicted RBP17.7■□□□□ 0.42
SIK3-205ENST00000446921 PAFAH1B1P43034 410 aa17.7■□□□□ 0.42
SIK3-205ENST00000446921 SCTRP47872 440 aa17.7■□□□□ 0.42
SIK3-205ENST00000446921 FAM133BQ5BKY9 247 aaKnown RBP17.7■□□□□ 0.42
SIK3-205ENST00000446921 DZIP1Q86YF9 867 aaKnown RBP17.7■□□□□ 0.42
SIK3-205ENST00000446921 VPS16Q9H269 839 aa17.7■□□□□ 0.42
SIK3-205ENST00000446921 SHANK2Q9UPX8 1470 aa17.7■□□□□ 0.42
SIK3-205ENST00000446921 COBLO75128 1261 aa17.7■□□□□ 0.42
SIK3-205ENST00000446921 ATP6V1G2O95670 118 aa17.7■□□□□ 0.42
SIK3-205ENST00000446921 ZC3H6P61129 1189 aaKnown RBP17.7■□□□□ 0.42
SIK3-205ENST00000446921 PANX2Q96RD6 677 aa17.7■□□□□ 0.42
SIK3-205ENST00000446921 AMPHP49418 695 aa17.69■□□□□ 0.42
SIK3-205ENST00000446921 PDE4BQ07343 736 aa17.69■□□□□ 0.42
SIK3-205ENST00000446921 CCDC129Q6ZRS4 1044 aa17.69■□□□□ 0.42
SIK3-205ENST00000446921 SDCCAG8Q86SQ7 713 aaPredicted RBP17.69■□□□□ 0.42
SIK3-205ENST00000446921 DNAJC5BQ9UF47 199 aa17.69■□□□□ 0.42
SIK3-205ENST00000446921 EVI5O60447 810 aa17.69■□□□□ 0.42
SIK3-205ENST00000446921 CYP26C1Q6V0L0 522 aa17.69■□□□□ 0.42
SIK3-205ENST00000446921 MYO1AQ9UBC5 1043 aa17.69■□□□□ 0.42
SIK3-205ENST00000446921 C15orf41Q9Y2V0 281 aa17.69■□□□□ 0.42
SIK3-205ENST00000446921 AMOTQ4VCS5 1084 aa17.69■□□□□ 0.42
SIK3-205ENST00000446921 TTMPQ5BVD1 217 aa17.69■□□□□ 0.42
SIK3-205ENST00000446921 PHACTR1Q9C0D0 580 aa17.69■□□□□ 0.42
SIK3-205ENST00000446921 SWAP70Q9UH65 585 aa17.69■□□□□ 0.42
SIK3-205ENST00000446921 FAM107AO95990 144 aa17.68■□□□□ 0.42
SIK3-205ENST00000446921 CMA1P23946 247 aa17.68■□□□□ 0.42
SIK3-205ENST00000446921 DRP2Q13474 957 aa17.68■□□□□ 0.42
SIK3-205ENST00000446921 TSHZ1Q6ZSZ6 1077 aa17.68■□□□□ 0.42
SIK3-205ENST00000446921 FAM228AQ86W67 206 aa17.68■□□□□ 0.42
SIK3-205ENST00000446921 ATP5JP18859 108 aa17.68■□□□□ 0.42
SIK3-205ENST00000446921 CNGA1P29973 690 aa17.68■□□□□ 0.42
SIK3-205ENST00000446921 EZH2Q15910 746 aaKnown RBP17.68■□□□□ 0.42
SIK3-205ENST00000446921 MIS18BP1Q6P0N0 1132 aa17.68■□□□□ 0.42
SIK3-205ENST00000446921 ZIM3Q96PE6 472 aa17.68■□□□□ 0.42
SIK3-205ENST00000446921 SH3GL2Q99962 352 aa17.68■□□□□ 0.42
SIK3-205ENST00000446921 DNM1LO00429 736 aa17.68■□□□□ 0.42
SIK3-205ENST00000446921 MDH1P40925 334 aaKnown RBP17.68■□□□□ 0.42
SIK3-205ENST00000446921 PPARAQ07869 468 aa17.68■□□□□ 0.42
SIK3-205ENST00000446921 C8orf74Q6P047 294 aa17.68■□□□□ 0.42
SIK3-205ENST00000446921 EDC3Q96F86 508 aaKnown RBP17.68■□□□□ 0.42
SIK3-205ENST00000446921 XAGE2Q96GT9 111 aa17.68■□□□□ 0.42
SIK3-205ENST00000446921 RPGRIP1Q96KN7 1286 aa17.68■□□□□ 0.42
SIK3-205ENST00000446921 BLOC1S6Q9UL45 172 aa17.68■□□□□ 0.42
SIK3-205ENST00000446921 KRT86O43790 486 aa17.67■□□□□ 0.42
SIK3-205ENST00000446921 ANKS4BQ8N8V4 417 aa17.67■□□□□ 0.42
SIK3-205ENST00000446921 EPAS1Q99814 870 aa17.67■□□□□ 0.42
SIK3-205ENST00000446921 USP44Q9H0E7 712 aa17.67■□□□□ 0.42
SIK3-205ENST00000446921 hCG_2014768A0A024R1R8 64 aa17.67■□□□□ 0.42
SIK3-205ENST00000446921 CDC25AP30304 524 aa17.67■□□□□ 0.42
SIK3-205ENST00000446921 LRRC1Q9BTT6 524 aa17.67■□□□□ 0.42
SIK3-205ENST00000446921 NUP58Q9BVL2 599 aa17.67■□□□□ 0.42
SIK3-205ENST00000446921 YIPF2Q9BWQ6 316 aa17.67■□□□□ 0.42
SIK3-205ENST00000446921 GMNCA6NCL1 334 aa17.67■□□□□ 0.42
SIK3-205ENST00000446921 FOXN1O15353 648 aa17.67■□□□□ 0.42
SIK3-205ENST00000446921 EPHB4P54760 987 aa17.67■□□□□ 0.42
SIK3-205ENST00000446921 ALS2CLQ60I27 953 aa17.67■□□□□ 0.42
SIK3-205ENST00000446921 YTHDF3Q7Z739 585 aaKnown RBP17.67■□□□□ 0.42
SIK3-205ENST00000446921 LMNTD2Q8IXW0 634 aa17.67■□□□□ 0.42
SIK3-205ENST00000446921 TEKT4Q8WW24 435 aa17.67■□□□□ 0.42
SIK3-205ENST00000446921 KCNH3Q9ULD8 1083 aa17.67■□□□□ 0.42
SIK3-205ENST00000446921 TTC37Q6PGP7 1564 aa17.67■□□□□ 0.42
SIK3-205ENST00000446921 AFMP43652 599 aa17.66■□□□□ 0.42
SIK3-205ENST00000446921 RASGRP2Q7LDG7 609 aa17.66■□□□□ 0.42
SIK3-205ENST00000446921 ZNF589Q86UQ0 364 aaPredicted RBP17.66■□□□□ 0.42
SIK3-205ENST00000446921 OR8K1Q8NGG5 319 aa17.66■□□□□ 0.42
SIK3-205ENST00000446921 DMGDHQ9UI17 866 aaKnown RBP17.66■□□□□ 0.42
SIK3-205ENST00000446921 EPN1Q9Y6I3 576 aaPredicted RBP17.66■□□□□ 0.42
SIK3-205ENST00000446921 DESP17661 470 aa17.66■□□□□ 0.42
SIK3-205ENST00000446921 CXCR5P32302 372 aa17.66■□□□□ 0.42
SIK3-205ENST00000446921 ANKRD20A8PQ5CZ79 823 aa17.66■□□□□ 0.42
SIK3-205ENST00000446921 LLPHQ9BRT6 129 aaKnown RBP17.66■□□□□ 0.42
SIK3-205ENST00000446921 CHL1O00533 1208 aa17.66■□□□□ 0.42
SIK3-205ENST00000446921 MFAP3LO75121 409 aa17.66■□□□□ 0.42
SIK3-205ENST00000446921 FERP16591 822 aa17.66■□□□□ 0.42
SIK3-205ENST00000446921 SLC5A9Q2M3M2 681 aa17.66■□□□□ 0.42
SIK3-205ENST00000446921 TLDC1Q6P9B6 456 aa17.66■□□□□ 0.42
SIK3-205ENST00000446921 MAB21L3Q8N8X9 362 aa17.66■□□□□ 0.42
SIK3-205ENST00000446921 HDAC7Q8WUI4 952 aa17.66■□□□□ 0.42
SIK3-205ENST00000446921 DNMBPQ6XZF7 1577 aa17.65■□□□□ 0.42
SIK3-205ENST00000446921 ERICH2A1L162 156 aa17.65■□□□□ 0.42
SIK3-205ENST00000446921 LUC7L3O95232 432 aaKnown RBP17.65■□□□□ 0.42
SIK3-205ENST00000446921 MYL1P05976 194 aa17.65■□□□□ 0.42
SIK3-205ENST00000446921 RNASE9P60153 205 aaKnown RBP17.65■□□□□ 0.42
SIK3-205ENST00000446921 TSEN2Q8NCE0 465 aaKnown RBP17.65■□□□□ 0.42
SIK3-205ENST00000446921 SSH3Q8TE77 659 aa17.65■□□□□ 0.42
SIK3-205ENST00000446921 HSD3B7Q9H2F3 369 aa17.65■□□□□ 0.42
SIK3-205ENST00000446921 ESYT3A0FGR9 886 aa17.65■□□□□ 0.42
SIK3-205ENST00000446921 SASH1O94885 1247 aa17.65■□□□□ 0.42
SIK3-205ENST00000446921 FMR1Q06787 632 aaKnown RBP eCLIP17.65■□□□□ 0.422e-8■■■■■ 29.9
SIK3-205ENST00000446921 TBX2Q13207 712 aaPredicted RBP17.65■□□□□ 0.42
SIK3-205ENST00000446921 TRIM29Q14134 588 aa17.65■□□□□ 0.42
SIK3-205ENST00000446921 NCAPG2Q86XI2 1143 aa17.65■□□□□ 0.42
SIK3-205ENST00000446921 MFN1Q8IWA4 741 aa17.65■□□□□ 0.42
SIK3-205ENST00000446921 GRAMD1CQ8IYS0 662 aa17.65■□□□□ 0.42
SIK3-205ENST00000446921 ALS2CR12Q96Q35 445 aa17.65■□□□□ 0.42
SIK3-205ENST00000446921 FANCAO15360 1455 aa17.65■□□□□ 0.42
SIK3-205ENST00000446921 HMGXB3Q12766 1538 aa17.65■□□□□ 0.42
SIK3-205ENST00000446921 TARSL2A2RTX5 802 aaKnown RBP17.65■□□□□ 0.42
SIK3-205ENST00000446921 AHCYL1O43865 530 aa17.65■□□□□ 0.42
SIK3-205ENST00000446921 IMPDH2P12268 514 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms