RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 OSBP2Q969R2 916 aa22.77■■□□□ 1.24
HMGB3P22-201ENST00000442010 TMEM106CQ9BVX2 250 aa22.77■■□□□ 1.24
HMGB3P22-201ENST00000442010 GREB1LQ9C091 1923 aaPredicted RBP22.76■■□□□ 1.23
HMGB3P22-201ENST00000442010 CYP2D7A0A087X1C5 515 aa22.76■■□□□ 1.23
HMGB3P22-201ENST00000442010 RNF113AO15541 343 aaKnown RBP22.76■■□□□ 1.23
HMGB3P22-201ENST00000442010 HERVK_113P62684 666 aa22.76■■□□□ 1.23
HMGB3P22-201ENST00000442010 APPBP2Q92624 585 aa22.76■■□□□ 1.23
HMGB3P22-201ENST00000442010 TXNRD2Q9NNW7 524 aa22.76■■□□□ 1.23
HMGB3P22-201ENST00000442010 ERC2O15083 957 aa22.75■■□□□ 1.23
HMGB3P22-201ENST00000442010 PEX10O60683 326 aa22.75■■□□□ 1.23
HMGB3P22-201ENST00000442010 GLRX3O76003 335 aaKnown RBP22.75■■□□□ 1.23
HMGB3P22-201ENST00000442010 USP14P54578 494 aa22.75■■□□□ 1.23
HMGB3P22-201ENST00000442010 IRF5Q13568 498 aa22.75■■□□□ 1.23
HMGB3P22-201ENST00000442010 AAMPQ13685 434 aa22.75■■□□□ 1.23
HMGB3P22-201ENST00000442010 MTFR1Q15390 333 aa22.75■■□□□ 1.23
HMGB3P22-201ENST00000442010 CTR9Q6PD62 1173 aa22.75■■□□□ 1.23
HMGB3P22-201ENST00000442010 GCC1Q96CN9 775 aa22.75■■□□□ 1.23
HMGB3P22-201ENST00000442010 RBPJLQ9UBG7 517 aa22.75■■□□□ 1.23
HMGB3P22-201ENST00000442010 PARP14Q460N5 1801 aa22.75■■□□□ 1.23
HMGB3P22-201ENST00000442010 A0A1W2PRG0 241 aa22.74■■□□□ 1.23
HMGB3P22-201ENST00000442010 GSG1L2A8MUP6 293 aa22.74■■□□□ 1.23
HMGB3P22-201ENST00000442010 MYCP01106 439 aaPredicted RBP22.74■■□□□ 1.23
HMGB3P22-201ENST00000442010 ZFYP08048 801 aaPredicted RBP22.74■■□□□ 1.23
HMGB3P22-201ENST00000442010 MX1P20591 662 aa22.74■■□□□ 1.23
HMGB3P22-201ENST00000442010 CDK8P49336 464 aa22.74■■□□□ 1.23
HMGB3P22-201ENST00000442010 ZYXQ15942 572 aaKnown RBP22.74■■□□□ 1.23
HMGB3P22-201ENST00000442010 C16orf86Q6ZW13 317 aa22.74■■□□□ 1.23
HMGB3P22-201ENST00000442010 SLAIN1Q8ND83 568 aa22.74■■□□□ 1.23
HMGB3P22-201ENST00000442010 PXYLP1Q8TE99 480 aa22.74■■□□□ 1.23
HMGB3P22-201ENST00000442010 COA7Q96BR5 231 aa22.74■■□□□ 1.23
HMGB3P22-201ENST00000442010 FEZ1Q99689 392 aa22.74■■□□□ 1.23
HMGB3P22-201ENST00000442010 AKR1B1P15121 316 aa22.73■■□□□ 1.23
HMGB3P22-201ENST00000442010 VCAM1P19320 739 aa22.73■■□□□ 1.23
HMGB3P22-201ENST00000442010 ANKRD45Q5TZF3 282 aa22.73■■□□□ 1.23
HMGB3P22-201ENST00000442010 CATSPERGQ6ZRH7 1159 aa22.73■■□□□ 1.23
HMGB3P22-201ENST00000442010 TMEM179Q6ZVK1 233 aa22.73■■□□□ 1.23
HMGB3P22-201ENST00000442010 SIAH1Q8IUQ4 282 aa22.73■■□□□ 1.23
HMGB3P22-201ENST00000442010 GJD2Q9UKL4 321 aa22.73■■□□□ 1.23
HMGB3P22-201ENST00000442010 USP17L15C9J2P7 530 aa22.72■■□□□ 1.23
HMGB3P22-201ENST00000442010 USP17L13C9JLJ4 530 aa22.72■■□□□ 1.23
HMGB3P22-201ENST00000442010 USP17L11C9JVI0 530 aa22.72■■□□□ 1.23
HMGB3P22-201ENST00000442010 USP17L18D6R9N7 530 aa22.72■■□□□ 1.23
HMGB3P22-201ENST00000442010 USP17L22D6RA61 530 aa22.72■■□□□ 1.23
HMGB3P22-201ENST00000442010 USP17L17D6RBQ6 530 aa22.72■■□□□ 1.23
HMGB3P22-201ENST00000442010 USP17L19D6RCP7 530 aa22.72■■□□□ 1.23
HMGB3P22-201ENST00000442010 USP17L20D6RJB6 530 aa22.72■■□□□ 1.23
HMGB3P22-201ENST00000442010 M0R2C6 588 aa22.72■■□□□ 1.23
HMGB3P22-201ENST00000442010 MPHOSPH10O00566 681 aaKnown RBP22.72■■□□□ 1.23
HMGB3P22-201ENST00000442010 ADCY3O60266 1144 aa22.72■■□□□ 1.23
HMGB3P22-201ENST00000442010 USP17L24Q0WX57 530 aa22.72■■□□□ 1.23
HMGB3P22-201ENST00000442010 Q3C1V9 767 aa22.72■■□□□ 1.23
HMGB3P22-201ENST00000442010 SBK1Q52WX2 424 aa22.72■■□□□ 1.23
HMGB3P22-201ENST00000442010 GIMAP6Q6P9H5 292 aa22.72■■□□□ 1.23
HMGB3P22-201ENST00000442010 GTF3C2Q8WUA4 911 aaPredicted RBP22.72■■□□□ 1.23
HMGB3P22-201ENST00000442010 DDRGK1Q96HY6 314 aa22.72■■□□□ 1.23
HMGB3P22-201ENST00000442010 ARPP21Q9UBL0 812 aaPredicted RBP22.72■■□□□ 1.23
HMGB3P22-201ENST00000442010 GPAA1O43292 621 aa22.71■■□□□ 1.23
HMGB3P22-201ENST00000442010 AMOTL1Q8IY63 956 aa22.71■■□□□ 1.23
HMGB3P22-201ENST00000442010 GPRC5AQ8NFJ5 357 aa22.71■■□□□ 1.23
HMGB3P22-201ENST00000442010 CCDC17Q96LX7 622 aa22.71■■□□□ 1.23
HMGB3P22-201ENST00000442010 STAP2Q9UGK3 403 aa22.71■■□□□ 1.23
HMGB3P22-201ENST00000442010 CNMDO75829 334 aa22.7■■□□□ 1.22
HMGB3P22-201ENST00000442010 ELNP15502 786 aa22.7■■□□□ 1.22
HMGB3P22-201ENST00000442010 ERVK-9P63128 1117 aa22.7■■□□□ 1.22
HMGB3P22-201ENST00000442010 ERVK-24P63145 666 aa22.7■■□□□ 1.22
HMGB3P22-201ENST00000442010 LBX2Q6XYB7 198 aa22.7■■□□□ 1.22
HMGB3P22-201ENST00000442010 EPB41L4AQ9HCS5 686 aaPredicted RBP22.7■■□□□ 1.22
HMGB3P22-201ENST00000442010 A0A0G2JMZ2 1700 aa22.7■■□□□ 1.22
HMGB3P22-201ENST00000442010 ROBO3Q96MS0 1386 aa22.69■■□□□ 1.22
HMGB3P22-201ENST00000442010 CCL5P13501 91 aa22.69■■□□□ 1.22
HMGB3P22-201ENST00000442010 UBXN2AP68543 259 aa22.69■■□□□ 1.22
HMGB3P22-201ENST00000442010 KIAA1755Q5JYT7 1200 aa22.69■■□□□ 1.22
HMGB3P22-201ENST00000442010 CLEC10AQ8IUN9 316 aa22.69■■□□□ 1.22
HMGB3P22-201ENST00000442010 SHISA4Q96DD7 197 aa22.69■■□□□ 1.22
HMGB3P22-201ENST00000442010 PDE1AP54750 535 aa22.68■■□□□ 1.22
HMGB3P22-201ENST00000442010 LRRFIP1Q32MZ4 808 aaKnown RBP22.68■■□□□ 1.22
HMGB3P22-201ENST00000442010 ZMYM1Q5SVZ6 1142 aa22.68■■□□□ 1.22
HMGB3P22-201ENST00000442010 SMC5Q8IY18 1101 aa22.68■■□□□ 1.22
HMGB3P22-201ENST00000442010 EXOC6Q8TAG9 804 aa22.68■■□□□ 1.22
HMGB3P22-201ENST00000442010 SEC62Q99442 399 aaKnown RBP22.68■■□□□ 1.22
HMGB3P22-201ENST00000442010 FSD1Q9BTV5 496 aa22.68■■□□□ 1.22
HMGB3P22-201ENST00000442010 PORCNQ9H237 461 aa22.68■■□□□ 1.22
HMGB3P22-201ENST00000442010 RPAP3Q9H6T3 665 aaPredicted RBP22.68■■□□□ 1.22
HMGB3P22-201ENST00000442010 MYH4Q9Y623 1939 aa22.67■■□□□ 1.22
HMGB3P22-201ENST00000442010 INHAP05111 366 aa22.67■■□□□ 1.22
HMGB3P22-201ENST00000442010 GJB1P08034 283 aa22.67■■□□□ 1.22
HMGB3P22-201ENST00000442010 GNAT2P19087 354 aa22.67■■□□□ 1.22
HMGB3P22-201ENST00000442010 PAGR1Q9BTK6 254 aa22.67■■□□□ 1.22
HMGB3P22-201ENST00000442010 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.67■■□□□ 1.22
HMGB3P22-201ENST00000442010 UNC93B1Q9H1C4 597 aa22.67■■□□□ 1.22
HMGB3P22-201ENST00000442010 BIN2Q9UBW5 565 aaPredicted RBP22.67■■□□□ 1.22
HMGB3P22-201ENST00000442010 TMX2Q9Y320 296 aa22.67■■□□□ 1.22
HMGB3P22-201ENST00000442010 RABGAP1Q9Y3P9 1069 aa22.67■■□□□ 1.22
HMGB3P22-201ENST00000442010 COL11A1P12107 1806 aaPredicted RBP22.66■■□□□ 1.22
HMGB3P22-201ENST00000442010 SPDYE16A6NNV3 312 aaPredicted RBP22.66■■□□□ 1.22
HMGB3P22-201ENST00000442010 PATL2C9JE40 543 aaKnown RBP22.66■■□□□ 1.22
HMGB3P22-201ENST00000442010 MAPK4P31152 587 aa22.66■■□□□ 1.22
HMGB3P22-201ENST00000442010 GJA8P48165 433 aa22.66■■□□□ 1.22
HMGB3P22-201ENST00000442010 ICA1Q05084 483 aa22.66■■□□□ 1.22
HMGB3P22-201ENST00000442010 RNF208Q9H0X6 261 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms