RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 NUP153P49790 1475 aaKnown RBP6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CARMIL2Q6F5E8 1435 aa6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 FAM221AA4D161 298 aa6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SLC26A4O43511 780 aa6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 PPFIA3O75145 1194 aa6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CD2BP2O95400 341 aaKnown RBP6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 KCNA2P16389 499 aa6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CPEP16870 476 aa6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CDC27P30260 824 aa6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 DMTNQ08495 405 aa6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 KIAA2012Q0VF49 1180 aa6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 ZC3H12BQ5HYM0 836 aaKnown RBP6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 PLA2G2CQ5R387 149 aa6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CCDC70Q6NSX1 233 aa6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 Q6ZVU0 165 aa6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 HDGFL2Q7Z4V5 671 aaPredicted RBP6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CCNJLQ8IV13 435 aa6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SPATA9Q9BWV2 254 aa6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 ACAD8Q9UKU7 415 aa6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 MAPRE3Q9UPY8 281 aa6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CEP170Q5SW79 1584 aa6.93□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 KHNYNO15037 678 aaKnown RBP6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 KATNA1O75449 491 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 GRNP28799 593 aaKnown RBP6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CLK1P49759 484 aaKnown RBP6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 WASHC5Q12768 1159 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CBX2Q14781 532 aaPredicted RBP6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 INO80DQ53TQ3 878 aaPredicted RBP6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 ARSJQ5FYB0 599 aaPredicted RBP6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 NDUFAF2Q8N183 169 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 C19orf47Q8N9M1 422 aaKnown RBP6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 ACRBPQ8NEB7 543 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 MYRIPQ8NFW9 859 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 GOLGA1Q92805 767 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CCDC34Q96HJ3 373 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 TTC14Q96N46 770 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 GRIP2Q9C0E4 1043 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 EVLQ9UI08 416 aaPredicted RBP6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SLC45A1Q9Y2W3 748 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 PCDHB5Q9Y5E4 795 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 PAGE1O75459 146 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 RFPL3O75679 317 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 PHKA2P46019 1235 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 NEK2P51955 445 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 NAP1L1P55209 391 aaKnown RBP6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 TMEM95Q3KNT9 176 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SLC4A10Q6U841 1118 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 MTERF4Q7Z6M4 381 aaKnown RBP6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 KIAA1958Q8N8K9 716 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 ZBTB38Q8NAP3 1195 aaPredicted RBP6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 ATRIPQ8WXE1 791 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 ASPSCR1Q9BZE9 553 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 C11orf16Q9NQ32 467 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SEC31BQ9NQW1 1179 aa6.92□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 A0A1W2PQH9 124 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 GOLGA6L22H0YM25 854 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 MYL3P08590 195 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 RPIAP49247 311 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 TOMM20Q15388 145 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SLC4A8Q2Y0W8 1093 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 HGSNATQ68CP4 663 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 MRM1Q6IN84 353 aaKnown RBP6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 KSR2Q6VAB6 950 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 RUFY4Q6ZNE9 571 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 LRRC47Q8N1G4 583 aaKnown RBP6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 AFAP1L2Q8N4X5 818 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 ANKLE1Q8NAG6 615 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 TTC8Q8TAM2 541 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 FMNL2Q96PY5 1086 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 YY1AP1Q9H869 796 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CLIC5Q9NZA1 410 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 MRPS23Q9Y3D9 190 aaKnown RBP6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 NUP160Q12769 1436 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 RNF223E7ERA6 249 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 AKAP10O43572 662 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CILPO75339 1184 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 KIF20AO95235 890 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 NAT1P18440 290 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 GPC1P35052 558 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SATB1Q01826 763 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 TYRO3Q06418 890 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SEPT2Q15019 361 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 TTC6Q86TZ1 520 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 RIN3Q8TB24 985 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 OSMRQ99650 979 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 ZKSCAN3Q9BRR0 538 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 ZNF700Q9H0M5 742 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 RANBP17Q9H2T7 1088 aaKnown RBP6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SUDS3Q9H7L9 328 aaPredicted RBP6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 GPN3Q9UHW5 284 aaPredicted RBP6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 ZHX1Q9UKY1 873 aaPredicted RBP6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 TMCC3Q9ULS5 477 aa6.91□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 ROCK1Q13464 1354 aa6.9□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 GSG1L2A8MUP6 293 aa6.9□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 IPO5O00410 1097 aaKnown RBP6.9□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 FOSL1P15407 271 aa6.9□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 GRIA4P48058 902 aa6.9□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 DDX10Q13206 875 aaKnown RBP6.9□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 GRAMD1BQ3KR37 738 aa6.9□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CCDC73Q6ZRK6 1079 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms