RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 PRO3102Q9H379 93 aa22.07■■□□□ 1.12
GTF3A-204ENST00000438571 CHGBP05060 677 aa22.06■■□□□ 1.12
GTF3A-204ENST00000438571 CYP2D6P10635 497 aa22.06■■□□□ 1.12
GTF3A-204ENST00000438571 MNX1P50219 401 aaPredicted RBP22.06■■□□□ 1.12
GTF3A-204ENST00000438571 CCL14Q16627 93 aa22.06■■□□□ 1.12
GTF3A-204ENST00000438571 ABCB5Q2M3G0 1257 aa22.06■■□□□ 1.12
GTF3A-204ENST00000438571 CERKLQ49MI3 558 aaPredicted RBP22.06■■□□□ 1.12
GTF3A-204ENST00000438571 HSP90AB4PQ58FF6 505 aa22.06■■□□□ 1.12
GTF3A-204ENST00000438571 SLC9C2Q5TAH2 1124 aa22.06■■□□□ 1.12
GTF3A-204ENST00000438571 CERS3Q8IU89 383 aa22.06■■□□□ 1.12
GTF3A-204ENST00000438571 KIF1BPQ96EK5 621 aa22.06■■□□□ 1.12
GTF3A-204ENST00000438571 ZBTB40Q9NUA8 1239 aa22.06■■□□□ 1.12
GTF3A-204ENST00000438571 RPTORQ8N122 1335 aa22.06■■□□□ 1.12
GTF3A-204ENST00000438571 GABPAQ06546 454 aa22.05■■□□□ 1.12
GTF3A-204ENST00000438571 GPR142Q7Z601 462 aa22.05■■□□□ 1.12
GTF3A-204ENST00000438571 TTC6Q86TZ1 520 aa22.05■■□□□ 1.12
GTF3A-204ENST00000438571 CLASRPQ8N2M8 674 aaKnown RBP22.05■■□□□ 1.12
GTF3A-204ENST00000438571 NUDT12Q9BQG2 462 aa22.05■■□□□ 1.12
GTF3A-204ENST00000438571 HMX1Q9NP08 348 aaPredicted RBP22.05■■□□□ 1.12
GTF3A-204ENST00000438571 SMIM22K7EJ46 135 aa22.04■■□□□ 1.12
GTF3A-204ENST00000438571 PRKAR2AP13861 404 aaKnown RBP22.04■■□□□ 1.12
GTF3A-204ENST00000438571 VCAM1P19320 739 aa22.04■■□□□ 1.12
GTF3A-204ENST00000438571 SEPT2Q15019 361 aa22.04■■□□□ 1.12
GTF3A-204ENST00000438571 TTF1Q15361 905 aaPredicted RBP22.04■■□□□ 1.12
GTF3A-204ENST00000438571 MAP3K21Q5TCX8 1036 aa22.04■■□□□ 1.12
GTF3A-204ENST00000438571 RPAP2Q8IXW5 612 aaPredicted RBP22.04■■□□□ 1.12
GTF3A-204ENST00000438571 SLC44A5Q8NCS7 719 aa22.04■■□□□ 1.12
GTF3A-204ENST00000438571 USP6NLQ92738 828 aa22.04■■□□□ 1.12
GTF3A-204ENST00000438571 DDX19BQ9UMR2 479 aa22.04■■□□□ 1.12
GTF3A-204ENST00000438571 ZNF236Q9UL36 1845 aa22.03■■□□□ 1.12
GTF3A-204ENST00000438571 EVI5O60447 810 aa22.03■■□□□ 1.12
GTF3A-204ENST00000438571 POLR3DP05423 398 aaPredicted RBP22.03■■□□□ 1.12
GTF3A-204ENST00000438571 IFIT2P09913 472 aaKnown RBP22.03■■□□□ 1.12
GTF3A-204ENST00000438571 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.03■■□□□ 1.12
GTF3A-204ENST00000438571 SOCS4Q8WXH5 440 aa22.03■■□□□ 1.12
GTF3A-204ENST00000438571 KIAA1683Q9H0B3 1180 aa22.03■■□□□ 1.12
GTF3A-204ENST00000438571 NR2E3Q9Y5X4 410 aa22.03■■□□□ 1.12
GTF3A-204ENST00000438571 GREB1LQ9C091 1923 aaPredicted RBP22.03■■□□□ 1.12
GTF3A-204ENST00000438571 PLXNA1Q9UIW2 1896 aa22.03■■□□□ 1.12
GTF3A-204ENST00000438571 USP17L15C9J2P7 530 aa22.02■■□□□ 1.12
GTF3A-204ENST00000438571 USP17L13C9JLJ4 530 aa22.02■■□□□ 1.12
GTF3A-204ENST00000438571 USP17L11C9JVI0 530 aa22.02■■□□□ 1.12
GTF3A-204ENST00000438571 USP17L18D6R9N7 530 aa22.02■■□□□ 1.12
GTF3A-204ENST00000438571 USP17L22D6RA61 530 aa22.02■■□□□ 1.12
GTF3A-204ENST00000438571 USP17L17D6RBQ6 530 aa22.02■■□□□ 1.12
GTF3A-204ENST00000438571 USP17L19D6RCP7 530 aa22.02■■□□□ 1.12
GTF3A-204ENST00000438571 USP17L20D6RJB6 530 aa22.02■■□□□ 1.12
GTF3A-204ENST00000438571 PRKAB2O43741 272 aa22.02■■□□□ 1.12
GTF3A-204ENST00000438571 MAPK4P31152 587 aa22.02■■□□□ 1.12
GTF3A-204ENST00000438571 USP17L24Q0WX57 530 aa22.02■■□□□ 1.12
GTF3A-204ENST00000438571 MORN1Q5T089 497 aa22.02■■□□□ 1.12
GTF3A-204ENST00000438571 C20orf194Q5TEA3 1177 aa22.02■■□□□ 1.12
GTF3A-204ENST00000438571 CATSPERGQ6ZRH7 1159 aa22.02■■□□□ 1.12
GTF3A-204ENST00000438571 CRNKL1Q9BZJ0 848 aaKnown RBP22.02■■□□□ 1.12
GTF3A-204ENST00000438571 BOLA2Q9H3K6 86 aa22.02■■□□□ 1.12
GTF3A-204ENST00000438571 ARMT1Q9H993 441 aa22.02■■□□□ 1.12
GTF3A-204ENST00000438571 DCP1AQ9NPI6 582 aaPredicted RBP22.02■■□□□ 1.12
GTF3A-204ENST00000438571 MCM9Q9NXL9 1143 aa22.02■■□□□ 1.12
GTF3A-204ENST00000438571 BTBD7Q9P203 1132 aa22.02■■□□□ 1.12
GTF3A-204ENST00000438571 A0A1W2PRG0 241 aa22.01■■□□□ 1.11
GTF3A-204ENST00000438571 ZKSCAN1P17029 563 aaPredicted RBP22.01■■□□□ 1.11
GTF3A-204ENST00000438571 CCND3P30281 292 aaPredicted RBP22.01■■□□□ 1.11
GTF3A-204ENST00000438571 CACNB2Q08289 660 aaPredicted RBP22.01■■□□□ 1.11
GTF3A-204ENST00000438571 PDE3AQ14432 1141 aa22.01■■□□□ 1.11
GTF3A-204ENST00000438571 TMED8Q6PL24 325 aaPredicted RBP22.01■■□□□ 1.11
GTF3A-204ENST00000438571 NECAB2Q7Z6G3 386 aa22.01■■□□□ 1.11
GTF3A-204ENST00000438571 PLEKHH3Q7Z736 793 aa22.01■■□□□ 1.11
GTF3A-204ENST00000438571 CLEC10AQ8IUN9 316 aa22.01■■□□□ 1.11
GTF3A-204ENST00000438571 RPAP3Q9H6T3 665 aaPredicted RBP22.01■■□□□ 1.11
GTF3A-204ENST00000438571 MYH4Q9Y623 1939 aa22.01■■□□□ 1.11
GTF3A-204ENST00000438571 SPDYE16A6NNV3 312 aaPredicted RBP22■■□□□ 1.11
GTF3A-204ENST00000438571 HMMRO75330 724 aa22■■□□□ 1.11
GTF3A-204ENST00000438571 MS4A1P11836 297 aa22■■□□□ 1.11
GTF3A-204ENST00000438571 XRCC5P13010 732 aaKnown RBP22■■□□□ 1.11
GTF3A-204ENST00000438571 C7orf61Q8IZ16 206 aa22■■□□□ 1.11
GTF3A-204ENST00000438571 ANKLE1Q8NAG6 615 aa22■■□□□ 1.11
GTF3A-204ENST00000438571 GTF3C2Q8WUA4 911 aaPredicted RBP22■■□□□ 1.11
GTF3A-204ENST00000438571 DYNLL2Q96FJ2 89 aa22■■□□□ 1.11
GTF3A-204ENST00000438571 CABP5Q9NP86 173 aa22■■□□□ 1.11
GTF3A-204ENST00000438571 PAG1Q9NWQ8 432 aa22■■□□□ 1.11
GTF3A-204ENST00000438571 FLRT1Q9NZU1 646 aa22■■□□□ 1.11
GTF3A-204ENST00000438571 OGDHLQ9ULD0 1010 aa22■■□□□ 1.11
GTF3A-204ENST00000438571 RABGAP1Q9Y3P9 1069 aa22■■□□□ 1.11
GTF3A-204ENST00000438571 LAMA3Q16787 3333 aa22■■□□□ 1.11
GTF3A-204ENST00000438571 MBD4O95243 580 aa21.99■■□□□ 1.11
GTF3A-204ENST00000438571 ADD2P35612 726 aa21.99■■□□□ 1.11
GTF3A-204ENST00000438571 RGS2P41220 211 aa21.99■■□□□ 1.11
GTF3A-204ENST00000438571 USP14P54578 494 aa21.99■■□□□ 1.11
GTF3A-204ENST00000438571 KIAA1755Q5JYT7 1200 aa21.99■■□□□ 1.11
GTF3A-204ENST00000438571 CCAR1Q8IX12 1150 aaKnown RBP21.99■■□□□ 1.11
GTF3A-204ENST00000438571 APBA2Q99767 749 aa21.99■■□□□ 1.11
GTF3A-204ENST00000438571 PFASO15067 1338 aa21.99■■□□□ 1.11
GTF3A-204ENST00000438571 CYP2D7A0A087X1C5 515 aa21.98■■□□□ 1.11
GTF3A-204ENST00000438571 MPHOSPH10O00566 681 aaKnown RBP21.98■■□□□ 1.11
GTF3A-204ENST00000438571 SMARCA5O60264 1052 aaPredicted RBP21.98■■□□□ 1.11
GTF3A-204ENST00000438571 WDR78Q5VTH9 848 aa21.98■■□□□ 1.11
GTF3A-204ENST00000438571 STAP2Q9UGK3 403 aa21.98■■□□□ 1.11
GTF3A-204ENST00000438571 RCAN3Q9UKA8 241 aa21.98■■□□□ 1.11
GTF3A-204ENST00000438571 ZMYND8Q9ULU4 1186 aaPredicted RBP21.98■■□□□ 1.11
GTF3A-204ENST00000438571 RAB11FIP3O75154 756 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms