RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 CHGBP05060 677 aa26.39■■□□□ 1.82
RPUSD3-206ENST00000433535 CYP2D6P10635 497 aa26.39■■□□□ 1.82
RPUSD3-206ENST00000433535 ATP5JP18859 108 aa26.39■■□□□ 1.82
RPUSD3-206ENST00000433535 CYP2B6P20813 491 aa26.39■■□□□ 1.82
RPUSD3-206ENST00000433535 GUCY1A2P33402 732 aa26.39■■□□□ 1.82
RPUSD3-206ENST00000433535 ERVK-9P63128 1117 aa26.39■■□□□ 1.82
RPUSD3-206ENST00000433535 ERVK-24P63145 666 aa26.39■■□□□ 1.82
RPUSD3-206ENST00000433535 TRIB2Q92519 343 aa26.39■■□□□ 1.82
RPUSD3-206ENST00000433535 HTATIP2Q9BUP3 242 aa26.39■■□□□ 1.82
RPUSD3-206ENST00000433535 KIAA1683Q9H0B3 1180 aa26.39■■□□□ 1.82
RPUSD3-206ENST00000433535 PORCNQ9H237 461 aa26.39■■□□□ 1.82
RPUSD3-206ENST00000433535 CABP5Q9NP86 173 aa26.39■■□□□ 1.82
RPUSD3-206ENST00000433535 BAZ2AQ9UIF9 1905 aaKnown RBP26.38■■□□□ 1.81
RPUSD3-206ENST00000433535 MBD4O95243 580 aa26.38■■□□□ 1.81
RPUSD3-206ENST00000433535 TFRCP02786 760 aaKnown RBP26.38■■□□□ 1.81
RPUSD3-206ENST00000433535 VCAM1P19320 739 aa26.38■■□□□ 1.81
RPUSD3-206ENST00000433535 ADD2P35612 726 aa26.38■■□□□ 1.81
RPUSD3-206ENST00000433535 PDE3AQ14432 1141 aa26.38■■□□□ 1.81
RPUSD3-206ENST00000433535 Q3C1V9 767 aa26.38■■□□□ 1.81
RPUSD3-206ENST00000433535 SLC44A5Q8NCS7 719 aa26.38■■□□□ 1.81
RPUSD3-206ENST00000433535 MYH8P13535 1937 aa26.37■■□□□ 1.81
RPUSD3-206ENST00000433535 PRKAB2O43741 272 aa26.37■■□□□ 1.81
RPUSD3-206ENST00000433535 SMARCA5O60264 1052 aaPredicted RBP26.37■■□□□ 1.81
RPUSD3-206ENST00000433535 USP14P54578 494 aa26.37■■□□□ 1.81
RPUSD3-206ENST00000433535 SEPT2Q15019 361 aa26.37■■□□□ 1.81
RPUSD3-206ENST00000433535 GTF3C2Q8WUA4 911 aaPredicted RBP26.37■■□□□ 1.81
RPUSD3-206ENST00000433535 HAUS7Q99871 368 aa26.37■■□□□ 1.81
RPUSD3-206ENST00000433535 LRRCC1Q9C099 1032 aa26.37■■□□□ 1.81
RPUSD3-206ENST00000433535 CRISPLD2Q9H0B8 497 aa26.37■■□□□ 1.81
RPUSD3-206ENST00000433535 USP17L15C9J2P7 530 aa26.36■■□□□ 1.81
RPUSD3-206ENST00000433535 USP17L13C9JLJ4 530 aa26.36■■□□□ 1.81
RPUSD3-206ENST00000433535 USP17L11C9JVI0 530 aa26.36■■□□□ 1.81
RPUSD3-206ENST00000433535 USP17L18D6R9N7 530 aa26.36■■□□□ 1.81
RPUSD3-206ENST00000433535 USP17L22D6RA61 530 aa26.36■■□□□ 1.81
RPUSD3-206ENST00000433535 USP17L17D6RBQ6 530 aa26.36■■□□□ 1.81
RPUSD3-206ENST00000433535 USP17L19D6RCP7 530 aa26.36■■□□□ 1.81
RPUSD3-206ENST00000433535 USP17L20D6RJB6 530 aa26.36■■□□□ 1.81
RPUSD3-206ENST00000433535 MPHOSPH10O00566 681 aaKnown RBP26.36■■□□□ 1.81
RPUSD3-206ENST00000433535 MAPK4P31152 587 aa26.36■■□□□ 1.81
RPUSD3-206ENST00000433535 USP17L24Q0WX57 530 aa26.36■■□□□ 1.81
RPUSD3-206ENST00000433535 SOCS4Q8WXH5 440 aa26.36■■□□□ 1.81
RPUSD3-206ENST00000433535 NUDT12Q9BQG2 462 aa26.36■■□□□ 1.81
RPUSD3-206ENST00000433535 CNMDO75829 334 aa26.35■■□□□ 1.81
RPUSD3-206ENST00000433535 GPR142Q7Z601 462 aa26.35■■□□□ 1.81
RPUSD3-206ENST00000433535 CCAR1Q8IX12 1150 aaKnown RBP26.35■■□□□ 1.81
RPUSD3-206ENST00000433535 DYNLL2Q96FJ2 89 aa26.35■■□□□ 1.81
RPUSD3-206ENST00000433535 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.35■■□□□ 1.81
RPUSD3-206ENST00000433535 CATSPERGQ6ZRH7 1159 aa26.34■■□□□ 1.81
RPUSD3-206ENST00000433535 DIS3LQ8TF46 1054 aaKnown RBP26.34■■□□□ 1.81
RPUSD3-206ENST00000433535 RPAP3Q9H6T3 665 aaPredicted RBP26.34■■□□□ 1.81
RPUSD3-206ENST00000433535 RPTORQ8N122 1335 aa26.34■■□□□ 1.81
RPUSD3-206ENST00000433535 CHRDL2Q6WN34 429 aa26.33■■□□□ 1.81
RPUSD3-206ENST00000433535 HMX1Q9NP08 348 aaPredicted RBP26.33■■□□□ 1.81
RPUSD3-206ENST00000433535 ALPK3Q96L96 1907 aa26.33■■□□□ 1.81
RPUSD3-206ENST00000433535 CYP2D7A0A087X1C5 515 aa26.32■■□□□ 1.8
RPUSD3-206ENST00000433535 A0A1W2PRG0 241 aa26.32■■□□□ 1.8
RPUSD3-206ENST00000433535 SMIM22K7EJ46 135 aa26.32■■□□□ 1.8
RPUSD3-206ENST00000433535 PRKAR2AP13861 404 aaKnown RBP26.32■■□□□ 1.8
RPUSD3-206ENST00000433535 PLEKHH3Q7Z736 793 aa26.32■■□□□ 1.8
RPUSD3-206ENST00000433535 CLEC10AQ8IUN9 316 aa26.32■■□□□ 1.8
RPUSD3-206ENST00000433535 PAWRQ96IZ0 340 aaKnown RBP26.32■■□□□ 1.8
RPUSD3-206ENST00000433535 RABGAP1Q9Y3P9 1069 aa26.32■■□□□ 1.8
RPUSD3-206ENST00000433535 XRCC5P13010 732 aaKnown RBP26.31■■□□□ 1.8
RPUSD3-206ENST00000433535 ZKSCAN1P17029 563 aaPredicted RBP26.31■■□□□ 1.8
RPUSD3-206ENST00000433535 FXR1P51114 621 aaKnown RBP eCLIP26.31■■□□□ 1.8
RPUSD3-206ENST00000433535 CCL14Q16627 93 aa26.31■■□□□ 1.8
RPUSD3-206ENST00000433535 MORN1Q5T089 497 aa26.31■■□□□ 1.8
RPUSD3-206ENST00000433535 USP6NLQ92738 828 aa26.31■■□□□ 1.8
RPUSD3-206ENST00000433535 CWC22Q9HCG8 908 aaKnown RBP26.31■■□□□ 1.8
RPUSD3-206ENST00000433535 TRIOBPQ9H2D6 2365 aa26.31■■□□□ 1.8
RPUSD3-206ENST00000433535 SPDYE16A6NNV3 312 aaPredicted RBP26.3■■□□□ 1.8
RPUSD3-206ENST00000433535 MAP3K21Q5TCX8 1036 aa26.3■■□□□ 1.8
RPUSD3-206ENST00000433535 WDR78Q5VTH9 848 aa26.3■■□□□ 1.8
RPUSD3-206ENST00000433535 ATP8A2Q9NTI2 1148 aa26.3■■□□□ 1.8
RPUSD3-206ENST00000433535 BTBD7Q9P203 1132 aa26.3■■□□□ 1.8
RPUSD3-206ENST00000433535 SWAP70Q9UH65 585 aa26.3■■□□□ 1.8
RPUSD3-206ENST00000433535 AKR1B1P15121 316 aa26.29■■□□□ 1.8
RPUSD3-206ENST00000433535 RGS2P41220 211 aa26.29■■□□□ 1.8
RPUSD3-206ENST00000433535 UBE3CQ15386 1083 aa26.29■■□□□ 1.8
RPUSD3-206ENST00000433535 TMEM179Q6ZVK1 233 aa26.29■■□□□ 1.8
RPUSD3-206ENST00000433535 APBA2Q99767 749 aa26.29■■□□□ 1.8
RPUSD3-206ENST00000433535 PCDH10Q9P2E7 1040 aa26.29■■□□□ 1.8
RPUSD3-206ENST00000433535 A0A0G2JMZ2 1700 aa26.28■■□□□ 1.8
RPUSD3-206ENST00000433535 CAPN2P17655 700 aa26.28■■□□□ 1.8
RPUSD3-206ENST00000433535 CCNA1P78396 465 aa26.28■■□□□ 1.8
RPUSD3-206ENST00000433535 TSHZ3Q63HK5 1081 aa26.28■■□□□ 1.8
RPUSD3-206ENST00000433535 LBX2Q6XYB7 198 aa26.28■■□□□ 1.8
RPUSD3-206ENST00000433535 PUS7LQ9H0K6 701 aaKnown RBP26.28■■□□□ 1.8
RPUSD3-206ENST00000433535 ECHDC1Q9NTX5 307 aa26.28■■□□□ 1.8
RPUSD3-206ENST00000433535 NR2E3Q9Y5X4 410 aa26.28■■□□□ 1.8
RPUSD3-206ENST00000433535 SLC4A4Q9Y6R1 1079 aa26.28■■□□□ 1.8
RPUSD3-206ENST00000433535 USP17L12C9JPN9 530 aa26.27■■□□□ 1.8
RPUSD3-206ENST00000433535 USP17L21D6R901 530 aa26.27■■□□□ 1.8
RPUSD3-206ENST00000433535 EVI5O60447 810 aa26.27■■□□□ 1.8
RPUSD3-206ENST00000433535 KIAA1755Q5JYT7 1200 aa26.27■■□□□ 1.8
RPUSD3-206ENST00000433535 C12orf60Q5U649 245 aa26.27■■□□□ 1.8
RPUSD3-206ENST00000433535 TANGO6Q9C0B7 1094 aa26.27■■□□□ 1.8
RPUSD3-206ENST00000433535 RBM27Q9P2N5 1060 aaKnown RBP26.27■■□□□ 1.8
RPUSD3-206ENST00000433535 RLFQ13129 1914 aa26.27■■□□□ 1.8
RPUSD3-206ENST00000433535 ICA1Q05084 483 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms