RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 EDC3Q96F86 508 aaKnown RBP21.48■■□□□ 1.03
GPC1-203ENST00000425056 NUDT12Q9BQG2 462 aa21.48■■□□□ 1.03
GPC1-203ENST00000425056 CABP5Q9NP86 173 aa21.48■■□□□ 1.03
GPC1-203ENST00000425056 TRIOBPQ9H2D6 2365 aa21.47■■□□□ 1.03
GPC1-203ENST00000425056 ALPK3Q96L96 1907 aa21.47■■□□□ 1.03
GPC1-203ENST00000425056 USP17L15C9J2P7 530 aa21.47■■□□□ 1.03
GPC1-203ENST00000425056 USP17L13C9JLJ4 530 aa21.47■■□□□ 1.03
GPC1-203ENST00000425056 USP17L11C9JVI0 530 aa21.47■■□□□ 1.03
GPC1-203ENST00000425056 USP17L18D6R9N7 530 aa21.47■■□□□ 1.03
GPC1-203ENST00000425056 USP17L22D6RA61 530 aa21.47■■□□□ 1.03
GPC1-203ENST00000425056 USP17L17D6RBQ6 530 aa21.47■■□□□ 1.03
GPC1-203ENST00000425056 USP17L19D6RCP7 530 aa21.47■■□□□ 1.03
GPC1-203ENST00000425056 USP17L20D6RJB6 530 aa21.47■■□□□ 1.03
GPC1-203ENST00000425056 XRCC5P13010 732 aaKnown RBP21.47■■□□□ 1.03
GPC1-203ENST00000425056 VCAM1P19320 739 aa21.47■■□□□ 1.03
GPC1-203ENST00000425056 GUCY1A2P33402 732 aa21.47■■□□□ 1.03
GPC1-203ENST00000425056 USP17L24Q0WX57 530 aa21.47■■□□□ 1.03
GPC1-203ENST00000425056 LCORLQ8N3X6 602 aa21.47■■□□□ 1.03
GPC1-203ENST00000425056 ACER1Q8TDN7 264 aa21.47■■□□□ 1.03
GPC1-203ENST00000425056 PAGR1Q9BTK6 254 aa21.47■■□□□ 1.03
GPC1-203ENST00000425056 PORCNQ9H237 461 aa21.47■■□□□ 1.03
GPC1-203ENST00000425056 DCP1AQ9NPI6 582 aaPredicted RBP21.47■■□□□ 1.03
GPC1-203ENST00000425056 PAG1Q9NWQ8 432 aa21.47■■□□□ 1.03
GPC1-203ENST00000425056 MCM9Q9NXL9 1143 aa21.47■■□□□ 1.03
GPC1-203ENST00000425056 RPTORQ8N122 1335 aa21.47■■□□□ 1.03
GPC1-203ENST00000425056 RANBP2P49792 3224 aaKnown RBP21.47■■□□□ 1.03
GPC1-203ENST00000425056 ATP5JP18859 108 aa21.46■■□□□ 1.03
GPC1-203ENST00000425056 TRIM32Q13049 653 aa21.46■■□□□ 1.03
GPC1-203ENST00000425056 PDE3AQ14432 1141 aa21.46■■□□□ 1.03
GPC1-203ENST00000425056 Q3C1V9 767 aa21.46■■□□□ 1.03
GPC1-203ENST00000425056 SDR42E1Q8WUS8 393 aa21.46■■□□□ 1.03
GPC1-203ENST00000425056 HMX1Q9NP08 348 aaPredicted RBP21.46■■□□□ 1.03
GPC1-203ENST00000425056 BAZ2AQ9UIF9 1905 aaKnown RBP21.46■■□□□ 1.03
GPC1-203ENST00000425056 CYP2B6P20813 491 aa21.45■■□□□ 1.02
GPC1-203ENST00000425056 ADD2P35612 726 aa21.45■■□□□ 1.02
GPC1-203ENST00000425056 EVX2Q03828 476 aa21.45■■□□□ 1.02
GPC1-203ENST00000425056 MAP3K21Q5TCX8 1036 aa21.45■■□□□ 1.02
GPC1-203ENST00000425056 LBX2Q6XYB7 198 aa21.45■■□□□ 1.02
GPC1-203ENST00000425056 CATSPERGQ6ZRH7 1159 aa21.45■■□□□ 1.02
GPC1-203ENST00000425056 GPR142Q7Z601 462 aa21.45■■□□□ 1.02
GPC1-203ENST00000425056 ANKLE1Q8NAG6 615 aa21.45■■□□□ 1.02
GPC1-203ENST00000425056 USP6NLQ92738 828 aa21.45■■□□□ 1.02
GPC1-203ENST00000425056 HAUS7Q99871 368 aa21.45■■□□□ 1.02
GPC1-203ENST00000425056 BOLA2Q9H3K6 86 aa21.45■■□□□ 1.02
GPC1-203ENST00000425056 RABGAP1Q9Y3P9 1069 aa21.45■■□□□ 1.02
GPC1-203ENST00000425056 CNMDO75829 334 aa21.44■■□□□ 1.02
GPC1-203ENST00000425056 SEPT2Q15019 361 aa21.44■■□□□ 1.02
GPC1-203ENST00000425056 MORN1Q5T089 497 aa21.44■■□□□ 1.02
GPC1-203ENST00000425056 C20orf194Q5TEA3 1177 aa21.44■■□□□ 1.02
GPC1-203ENST00000425056 CHRDL2Q6WN34 429 aa21.44■■□□□ 1.02
GPC1-203ENST00000425056 TRMT44Q8IYL2 757 aaKnown RBP21.44■■□□□ 1.02
GPC1-203ENST00000425056 BCL11AQ9H165 835 aa21.44■■□□□ 1.02
GPC1-203ENST00000425056 ARMT1Q9H993 441 aa21.44■■□□□ 1.02
GPC1-203ENST00000425056 NR2E3Q9Y5X4 410 aa21.44■■□□□ 1.02
GPC1-203ENST00000425056 A0A0G2JMZ2 1700 aa21.43■■□□□ 1.02
GPC1-203ENST00000425056 PLEKHH3Q7Z736 793 aa21.43■■□□□ 1.02
GPC1-203ENST00000425056 CCAR1Q8IX12 1150 aaKnown RBP21.43■■□□□ 1.02
GPC1-203ENST00000425056 APBA2Q99767 749 aa21.43■■□□□ 1.02
GPC1-203ENST00000425056 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.43■■□□□ 1.02
GPC1-203ENST00000425056 MBD4O95243 580 aa21.42■■□□□ 1.02
GPC1-203ENST00000425056 CYP2D6P10635 497 aa21.42■■□□□ 1.02
GPC1-203ENST00000425056 PRKAR2AP13861 404 aaKnown RBP21.42■■□□□ 1.02
GPC1-203ENST00000425056 ZKSCAN1P17029 563 aaPredicted RBP21.42■■□□□ 1.02
GPC1-203ENST00000425056 RGS2P41220 211 aa21.42■■□□□ 1.02
GPC1-203ENST00000425056 CCNA1P78396 465 aa21.42■■□□□ 1.02
GPC1-203ENST00000425056 RLFQ13129 1914 aa21.42■■□□□ 1.02
GPC1-203ENST00000425056 SLFNL1Q499Z3 407 aa21.42■■□□□ 1.02
GPC1-203ENST00000425056 NECAB2Q7Z6G3 386 aa21.42■■□□□ 1.02
GPC1-203ENST00000425056 DIS3LQ8TF46 1054 aaKnown RBP21.42■■□□□ 1.02
GPC1-203ENST00000425056 PAWRQ96IZ0 340 aaKnown RBP21.42■■□□□ 1.02
GPC1-203ENST00000425056 LRRCC1Q9C099 1032 aa21.42■■□□□ 1.02
GPC1-203ENST00000425056 RPAP3Q9H6T3 665 aaPredicted RBP21.42■■□□□ 1.02
GPC1-203ENST00000425056 ATP8A2Q9NTI2 1148 aa21.42■■□□□ 1.02
GPC1-203ENST00000425056 SWAP70Q9UH65 585 aa21.42■■□□□ 1.02
GPC1-203ENST00000425056 SPDYE16A6NNV3 312 aaPredicted RBP21.41■■□□□ 1.02
GPC1-203ENST00000425056 TMEM179Q6ZVK1 233 aa21.41■■□□□ 1.02
GPC1-203ENST00000425056 SLC44A5Q8NCS7 719 aa21.41■■□□□ 1.02
GPC1-203ENST00000425056 PRO3102Q9H379 93 aa21.41■■□□□ 1.02
GPC1-203ENST00000425056 FRMPD3Q5JV73 1810 aa21.41■■□□□ 1.02
GPC1-203ENST00000425056 ZNF236Q9UL36 1845 aa21.41■■□□□ 1.02
GPC1-203ENST00000425056 A0A1W2PRG0 241 aa21.4■■□□□ 1.02
GPC1-203ENST00000425056 MPHOSPH10O00566 681 aaKnown RBP21.4■■□□□ 1.02
GPC1-203ENST00000425056 PRKAB2O43741 272 aa21.4■■□□□ 1.02
GPC1-203ENST00000425056 EVI5O60447 810 aa21.4■■□□□ 1.02
GPC1-203ENST00000425056 UBE3CQ15386 1083 aa21.4■■□□□ 1.02
GPC1-203ENST00000425056 RBM27Q9P2N5 1060 aaKnown RBP21.4■■□□□ 1.02
GPC1-203ENST00000425056 OGDHLQ9ULD0 1010 aa21.4■■□□□ 1.02
GPC1-203ENST00000425056 MNX1P50219 401 aaPredicted RBP21.39■■□□□ 1.01
GPC1-203ENST00000425056 MAP2K5Q13163 448 aa21.39■■□□□ 1.01
GPC1-203ENST00000425056 CCL14Q16627 93 aa21.39■■□□□ 1.01
GPC1-203ENST00000425056 CWC22Q9HCG8 908 aaKnown RBP21.39■■□□□ 1.01
GPC1-203ENST00000425056 BTBD7Q9P203 1132 aa21.39■■□□□ 1.01
GPC1-203ENST00000425056 PARP14Q460N5 1801 aa21.39■■□□□ 1.01
GPC1-203ENST00000425056 GLRX3O76003 335 aaKnown RBP21.38■■□□□ 1.01
GPC1-203ENST00000425056 CHGBP05060 677 aa21.38■■□□□ 1.01
GPC1-203ENST00000425056 CACNB2Q08289 660 aaPredicted RBP21.38■■□□□ 1.01
GPC1-203ENST00000425056 DYNLL2Q96FJ2 89 aa21.38■■□□□ 1.01
GPC1-203ENST00000425056 SLC15A5A6NIM6 579 aa21.37■■□□□ 1.01
GPC1-203ENST00000425056 SMARCA5O60264 1052 aaPredicted RBP21.37■■□□□ 1.01
GPC1-203ENST00000425056 C12orf60Q5U649 245 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms