RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 JADE2Q9NQC1 790 aa12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 GNL3LQ9NVN8 582 aaKnown RBP12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 MYH15Q9Y2K3 1946 aa12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 PALLDQ8WX93 1383 aa12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 MACROD2A1Z1Q3 448 aa12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 ATP5JP18859 108 aa12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 GPTP24298 496 aa12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 KCNH5Q8NCM2 988 aa12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 ZNF526Q8TF50 670 aaPredicted RBP12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 KIF3CO14782 793 aa12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 EIF3HO15372 352 aaKnown RBP eCLIP12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 PPP1R12BO60237 982 aaPredicted RBP12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 SLC39A6Q13433 755 aa12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 RESP18Q5W5W9 173 aa12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 SMCR8Q8TEV9 937 aaPredicted RBP12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 DMGDHQ9UI17 866 aaKnown RBP12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 BTBD18B2RXH4 712 aa12.72□□□□□ -0.37
SEC61A1-202ENST00000424880 KIAA0754O94854 1291 aa12.72□□□□□ -0.37
SEC61A1-202ENST00000424880 IFT88Q13099 833 aa12.72□□□□□ -0.37
SEC61A1-202ENST00000424880 BRAPQ7Z569 592 aa12.72□□□□□ -0.37
SEC61A1-202ENST00000424880 TBC1D22AQ8WUA7 517 aa12.72□□□□□ -0.37
SEC61A1-202ENST00000424880 TAB2Q9NYJ8 693 aa12.72□□□□□ -0.37
SEC61A1-202ENST00000424880 AHDC1Q5TGY3 1603 aaPredicted RBP12.72□□□□□ -0.37
SEC61A1-202ENST00000424880 MDM2Q00987 491 aaPredicted RBP12.72□□□□□ -0.37
SEC61A1-202ENST00000424880 AMPD2Q01433 879 aa12.72□□□□□ -0.37
SEC61A1-202ENST00000424880 WHAMMP3Q1A5X7 153 aa12.72□□□□□ -0.37
SEC61A1-202ENST00000424880 LRCH2Q5VUJ6 765 aa12.72□□□□□ -0.37
SEC61A1-202ENST00000424880 OSBP2Q969R2 916 aa12.72□□□□□ -0.37
SEC61A1-202ENST00000424880 ODF2LQ9ULJ1 636 aa12.72□□□□□ -0.37
SEC61A1-202ENST00000424880 MAST3O60307 1309 aa12.72□□□□□ -0.37
SEC61A1-202ENST00000424880 N4BP2Q86UW6 1770 aaPredicted RBP12.72□□□□□ -0.37
SEC61A1-202ENST00000424880 A0A1B0GTH6 734 aa12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 N4BP3O15049 544 aa12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 ELF1P32519 619 aa12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 KRT9P35527 623 aa12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 AARSP49588 968 aaKnown RBP eCLIP12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 WDR93Q6P2C0 686 aa12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 KBTBD3Q8NAB2 608 aa12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 CCDC85AQ96PX6 553 aaPredicted RBP12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 PANX2Q96RD6 677 aa12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 MAP3K14Q99558 947 aa12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 PAG1Q9NWQ8 432 aa12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 MST1RQ04912 1400 aa12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 MYH8P13535 1937 aa12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 MED1Q15648 1581 aaPredicted RBP12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 RGPD2P0DJD1 1756 aa12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 EIF4E1BA6NMX2 242 aaKnown RBP12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 NF2P35240 595 aa12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 CYP27A1Q02318 531 aa12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 CCDC122Q5T0U0 273 aa12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 PI16Q6UXB8 463 aa12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 APTXQ7Z2E3 356 aaKnown RBP12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 TSEN2Q8NCE0 465 aaKnown RBP12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 RNF217Q8TC41 542 aa12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 MIEF2Q96C03 454 aa12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 RBM28Q9NW13 759 aaKnown RBP12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 REXO2Q9Y3B8 237 aaKnown RBP12.71□□□□□ -0.37
SEC61A1-202ENST00000424880 TRPM3Q9HCF6 1732 aaPredicted RBP12.71□□□□□ -0.38
SEC61A1-202ENST00000424880 ANTXR2P58335 489 aa12.71□□□□□ -0.38
SEC61A1-202ENST00000424880 TUBB4BP68371 445 aa12.71□□□□□ -0.38
SEC61A1-202ENST00000424880 PTPN12Q05209 780 aaKnown RBP12.71□□□□□ -0.38
SEC61A1-202ENST00000424880 DDR1Q08345 913 aa12.71□□□□□ -0.38
SEC61A1-202ENST00000424880 BIRC2Q13490 618 aa12.71□□□□□ -0.38
SEC61A1-202ENST00000424880 SPRED3Q2MJR0 410 aa12.71□□□□□ -0.38
SEC61A1-202ENST00000424880 TTMPQ5BVD1 217 aa12.71□□□□□ -0.38
SEC61A1-202ENST00000424880 SGSM3Q96HU1 749 aa12.71□□□□□ -0.38
SEC61A1-202ENST00000424880 EPSTI1Q96J88 318 aa12.71□□□□□ -0.38
SEC61A1-202ENST00000424880 ZNF594Q96JF6 807 aaPredicted RBP12.71□□□□□ -0.38
SEC61A1-202ENST00000424880 BLZF1Q9H2G9 400 aa12.71□□□□□ -0.38
SEC61A1-202ENST00000424880 SAR1BQ9Y6B6 198 aa12.71□□□□□ -0.38
SEC61A1-202ENST00000424880 JCADQ9P266 1359 aa12.71□□□□□ -0.38
SEC61A1-202ENST00000424880 ESYT3A0FGR9 886 aa12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 MYO1BO43795 1136 aa12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 FGAP02671 866 aa12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 GUCY1A2P33402 732 aa12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 PEX19P40855 299 aa12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 FNTAP49354 379 aa12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 DPYDQ12882 1025 aa12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 NR5A1Q13285 461 aa12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 ENOX1Q8TC92 643 aaKnown RBP12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 JAKMIP2Q96AA8 810 aa12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 LRRC1Q9BTT6 524 aa12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 AGXT2Q9BYV1 514 aa12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 ABHD10Q9NUJ1 306 aa12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 SRCAPQ6ZRS2 3230 aa12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 SHOX2O60902 331 aaPredicted RBP12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 ATF3P18847 181 aa12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 MAP2K1Q02750 393 aaPredicted RBP12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 PPFIA1Q13136 1202 aa12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 LINS1Q8NG48 757 aa12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 HAUS7Q99871 368 aa12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 PCDHB6Q9Y5E3 794 aa12.7□□□□□ -0.38
SEC61A1-202ENST00000424880 OPLAHO14841 1288 aa12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 SF3B2Q13435 895 aaKnown RBP12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 CCNI2Q6ZMN8 369 aaPredicted RBP12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 TBC1D31Q96DN5 1066 aa12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 ADD3Q9UEY8 706 aaKnown RBP12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 NHSL1Q5SYE7 1610 aa12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 SLIT3O75094 1523 aa12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 hCG_1642624A0A1W2PR95 340 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms