RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 C2orf54Q08AI8 447 aa7.65□□□□□ -1.19
CNOT4-205ENST00000423368 TMEM154Q6P9G4 183 aa7.65□□□□□ -1.19
CNOT4-205ENST00000423368 C3orf67Q6ZVT6 689 aa7.65□□□□□ -1.19
CNOT4-205ENST00000423368 CPLX4Q7Z7G2 160 aa7.65□□□□□ -1.19
CNOT4-205ENST00000423368 OXER1Q8TDS5 423 aa7.65□□□□□ -1.19
CNOT4-205ENST00000423368 IFT81Q8WYA0 676 aa7.65□□□□□ -1.19
CNOT4-205ENST00000423368 CFAP53Q96M91 514 aa7.65□□□□□ -1.19
CNOT4-205ENST00000423368 SRPK1Q96SB4 655 aaKnown RBP7.65□□□□□ -1.19
CNOT4-205ENST00000423368 TTC21BQ7Z4L5 1316 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 OPA1O60313 960 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 POLR3DP05423 398 aaPredicted RBP7.64□□□□□ -1.19
CNOT4-205ENST00000423368 FAM200BP0CF97 657 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 FECHP22830 423 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 PSMC4P43686 418 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 CUL4BQ13620 913 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 C6orf183Q5T699 404 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 RASIP1Q5U651 963 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 ZNF280DQ6N043 979 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 KANK3Q6NY19 840 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 WDR75Q8IWA0 830 aaKnown RBP7.64□□□□□ -1.19
CNOT4-205ENST00000423368 CCDC63Q8NA47 563 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 MSANTD4Q8NCY6 345 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 AIDAQ96BJ3 306 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 SYT15Q9BQS2 421 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 MTA3Q9BTC8 594 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 PLCB1Q9NQ66 1216 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 NOP53Q9NZM5 478 aaKnown RBP7.64□□□□□ -1.19
CNOT4-205ENST00000423368 ZBTB21Q9ULJ3 1066 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 RASSF10A6NK89 507 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 SFI1A8K8P3 1242 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 F6X3S4 739 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 RAB11FIP3O75154 756 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 NFKBIAP25963 317 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 IGHMBP2P38935 993 aaKnown RBP7.64□□□□□ -1.19
CNOT4-205ENST00000423368 GCLCP48506 637 aaPredicted RBP7.64□□□□□ -1.19
CNOT4-205ENST00000423368 ST3GAL1Q11201 340 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 CBX3Q13185 183 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 TSR1Q2NL82 804 aaKnown RBP7.64□□□□□ -1.19
CNOT4-205ENST00000423368 OTUD7BQ6GQQ9 843 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 GALNT15Q8N3T1 639 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 RBM33Q96EV2 1170 aaKnown RBP7.64□□□□□ -1.19
CNOT4-205ENST00000423368 CYFIP2Q96F07 1278 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 NDNQ99608 321 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 ATP10AO60312 1499 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 RTL1A6NKG5 1358 aa7.64□□□□□ -1.19
CNOT4-205ENST00000423368 NPHP3-ACAD11A0A0J9YXS1 232 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 GNAT2P19087 354 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 PDE6CP51160 858 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 GUCY2DQ02846 1103 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 RNASELQ05823 741 aaKnown RBP7.63□□□□□ -1.19
CNOT4-205ENST00000423368 PTGISQ16647 500 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 ZNF827Q17R98 1081 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 SMUG1Q53HV7 270 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 EAPPQ56P03 285 aaPredicted RBP7.63□□□□□ -1.19
CNOT4-205ENST00000423368 ANKRD20A8PQ5CZ79 823 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 SIX5Q8N196 739 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 DDX50Q9BQ39 737 aaKnown RBP7.63□□□□□ -1.19
CNOT4-205ENST00000423368 REPIN1Q9BWE0 567 aaKnown RBP7.63□□□□□ -1.19
CNOT4-205ENST00000423368 SLC12A5Q9H2X9 1139 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 PLAAQ9Y263 795 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 RALGAPBQ86X10 1494 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 POLR1AO95602 1720 aaPredicted RBP7.63□□□□□ -1.19
CNOT4-205ENST00000423368 CSPG5O95196 566 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 SLC3A2P08195 630 aaKnown RBP7.63□□□□□ -1.19
CNOT4-205ENST00000423368 HMOX1P09601 288 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 ATP5JP18859 108 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 NDUFA8P51970 172 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 RNASE9P60153 205 aaKnown RBP7.63□□□□□ -1.19
CNOT4-205ENST00000423368 FOXD4Q12950 439 aaPredicted RBP7.63□□□□□ -1.19
CNOT4-205ENST00000423368 ANKRD20A2Q5SQ80 823 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 ANKRD20A1Q5TYW2 823 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 ANKRD20A3Q5VUR7 823 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 PI16Q6UXB8 463 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 SYNE3Q6ZMZ3 975 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 LCA5Q86VQ0 697 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 RAVER1Q8IY67 606 aaKnown RBP7.63□□□□□ -1.19
CNOT4-205ENST00000423368 TSEN2Q8NCE0 465 aaKnown RBP7.63□□□□□ -1.19
CNOT4-205ENST00000423368 NEK9Q8TD19 979 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 FGD4Q96M96 766 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 TRIM7Q9C029 511 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 EPN3Q9H201 632 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 JADE2Q9NQC1 790 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 SUN2Q9UH99 717 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 TDRKHQ9Y2W6 561 aaKnown RBP7.63□□□□□ -1.19
CNOT4-205ENST00000423368 CYP46A1Q9Y6A2 500 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 CXCR5P32302 372 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 KCNJ2P63252 427 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 C1QBPQ07021 282 aaKnown RBP7.63□□□□□ -1.19
CNOT4-205ENST00000423368 DCTN1Q14203 1278 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 KLHL10Q6JEL2 608 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 MTHFD1LQ6UB35 978 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 RAD9BQ6WBX8 426 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 MORC4Q8TE76 937 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 NAPGQ99747 312 aaPredicted RBP7.63□□□□□ -1.19
CNOT4-205ENST00000423368 GPHNQ9NQX3 736 aaPredicted RBP7.63□□□□□ -1.19
CNOT4-205ENST00000423368 TRIM35Q9UPQ4 493 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 ANKRD50Q9ULJ7 1429 aa7.63□□□□□ -1.19
CNOT4-205ENST00000423368 MAGEB3O15480 346 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 HSF2BPO75031 334 aa7.62□□□□□ -1.19
CNOT4-205ENST00000423368 SERPINB4P48594 390 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms