RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 RMDN1Q96DB5 314 aa5.25□□□□□ -1.57
CNGA1-203ENST00000420489 NECAB3Q96P71 396 aaPredicted RBP5.25□□□□□ -1.57
CNGA1-203ENST00000420489 POP1Q99575 1024 aaKnown RBP5.25□□□□□ -1.57
CNGA1-203ENST00000420489 COL11A1P12107 1806 aaPredicted RBP5.25□□□□□ -1.57
CNGA1-203ENST00000420489 ABL2P42684 1182 aa5.25□□□□□ -1.57
CNGA1-203ENST00000420489 POU4F2Q12837 409 aa5.25□□□□□ -1.57
CNGA1-203ENST00000420489 SETDB2Q96T68 719 aa5.25□□□□□ -1.57
CNGA1-203ENST00000420489 ARHGEF10LQ9HCE6 1279 aa5.25□□□□□ -1.57
CNGA1-203ENST00000420489 TRAK1Q9UPV9 953 aa5.25□□□□□ -1.57
CNGA1-203ENST00000420489 HRH3Q9Y5N1 445 aa5.25□□□□□ -1.57
CNGA1-203ENST00000420489 ARAP2Q8WZ64 1704 aa5.24□□□□□ -1.57
CNGA1-203ENST00000420489 COL4A1P02462 1669 aa5.24□□□□□ -1.57
CNGA1-203ENST00000420489 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.24□□□□□ -1.57
CNGA1-203ENST00000420489 SHTN1A0MZ66 631 aa5.24□□□□□ -1.57
CNGA1-203ENST00000420489 U2AF1L5P0DN76 240 aaPredicted RBP5.24□□□□□ -1.57
CNGA1-203ENST00000420489 CYP19A1P11511 503 aaPredicted RBP5.24□□□□□ -1.57
CNGA1-203ENST00000420489 U2AF1Q01081 240 aaKnown RBP eCLIP5.24□□□□□ -1.57
CNGA1-203ENST00000420489 PTPN12Q05209 780 aaKnown RBP5.24□□□□□ -1.57
CNGA1-203ENST00000420489 MCM6Q14566 821 aa5.24□□□□□ -1.57
CNGA1-203ENST00000420489 EPHA10Q5JZY3 1008 aa5.24□□□□□ -1.57
CNGA1-203ENST00000420489 ADSSL1Q8N142 457 aa5.24□□□□□ -1.57
CNGA1-203ENST00000420489 ZNF837Q96EG3 531 aaPredicted RBP5.24□□□□□ -1.57
CNGA1-203ENST00000420489 NUCKS1Q9H1E3 243 aaKnown RBP5.24□□□□□ -1.57
CNGA1-203ENST00000420489 GGA3Q9NZ52 723 aa5.24□□□□□ -1.57
CNGA1-203ENST00000420489 LOC105371045A0A1W2PR82 267 aa5.24□□□□□ -1.57
CNGA1-203ENST00000420489 UBE2Q2LH0YL09 131 aa5.24□□□□□ -1.57
CNGA1-203ENST00000420489 VIL1P09327 827 aaKnown RBP5.24□□□□□ -1.57
CNGA1-203ENST00000420489 RHOQP17081 205 aa5.24□□□□□ -1.57
CNGA1-203ENST00000420489 KRT76Q01546 638 aa5.24□□□□□ -1.57
CNGA1-203ENST00000420489 ZNF385CQ66K41 422 aaPredicted RBP5.24□□□□□ -1.57
CNGA1-203ENST00000420489 RIPOR1Q6ZS17 1223 aa5.24□□□□□ -1.57
CNGA1-203ENST00000420489 RHBDD1Q8TEB9 315 aa5.24□□□□□ -1.57
CNGA1-203ENST00000420489 FSD1Q9BTV5 496 aa5.24□□□□□ -1.57
CNGA1-203ENST00000420489 SLC45A1Q9Y2W3 748 aa5.24□□□□□ -1.57
CNGA1-203ENST00000420489 COL4A6Q14031 1691 aa5.24□□□□□ -1.57
CNGA1-203ENST00000420489 FRMPD3Q5JV73 1810 aa5.23□□□□□ -1.57
CNGA1-203ENST00000420489 PHF20L1A8MW92 1017 aa5.23□□□□□ -1.57
CNGA1-203ENST00000420489 PDE3AQ14432 1141 aa5.23□□□□□ -1.57
CNGA1-203ENST00000420489 SVOPQ8N4V2 548 aa5.23□□□□□ -1.57
CNGA1-203ENST00000420489 LSM14AQ8ND56 463 aaKnown RBP5.23□□□□□ -1.57
CNGA1-203ENST00000420489 WHAMMQ8TF30 809 aa5.23□□□□□ -1.57
CNGA1-203ENST00000420489 DDX1Q92499 740 aaKnown RBP5.23□□□□□ -1.57
CNGA1-203ENST00000420489 RBM17Q96I25 401 aaKnown RBP5.23□□□□□ -1.57
CNGA1-203ENST00000420489 MSRAQ9UJ68 235 aa5.23□□□□□ -1.57
CNGA1-203ENST00000420489 ATP6V0A2Q9Y487 856 aa5.23□□□□□ -1.57
CNGA1-203ENST00000420489 PRAMEF22A3QJZ6 481 aa5.23□□□□□ -1.57
CNGA1-203ENST00000420489 BACH1O14867 736 aa5.23□□□□□ -1.57
CNGA1-203ENST00000420489 IL2RAP01589 272 aa5.23□□□□□ -1.57
CNGA1-203ENST00000420489 SCTRP47872 440 aa5.23□□□□□ -1.57
CNGA1-203ENST00000420489 TAF1CQ15572 869 aaPredicted RBP5.23□□□□□ -1.57
CNGA1-203ENST00000420489 ANKRD23Q86SG2 305 aa5.23□□□□□ -1.57
CNGA1-203ENST00000420489 TMEM151AQ8N4L1 468 aa5.23□□□□□ -1.57
CNGA1-203ENST00000420489 HNRNPABQ99729 332 aaKnown RBP5.23□□□□□ -1.57
CNGA1-203ENST00000420489 NYXQ9GZU5 481 aa5.23□□□□□ -1.57
CNGA1-203ENST00000420489 ADAMTS8Q9UP79 889 aa5.23□□□□□ -1.57
CNGA1-203ENST00000420489 ZNF652Q9Y2D9 606 aa5.23□□□□□ -1.57
CNGA1-203ENST00000420489 POLR2AP24928 1970 aaKnown RBP5.23□□□□□ -1.57
CNGA1-203ENST00000420489 EVC2Q86UK5 1308 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 ZNF521Q96K83 1311 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 IL6STP40189 918 aaPredicted RBP5.22□□□□□ -1.57
CNGA1-203ENST00000420489 CAP1Q01518 475 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 EML3Q32P44 896 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 EFHC2Q5JST6 749 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 FIGNL1Q6PIW4 674 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 TPTE2Q6XPS3 522 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 PPARGC1BQ86YN6 1023 aaKnown RBP5.22□□□□□ -1.57
CNGA1-203ENST00000420489 ZFPM1Q8IX07 1006 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 ZNF496Q96IT1 587 aaPredicted RBP5.22□□□□□ -1.57
CNGA1-203ENST00000420489 GDPD2Q9HCC8 539 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 KCNH4Q9UQ05 1017 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 ZNF318Q5VUA4 2279 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 PIK3R2O00459 728 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 ARHGEF15O94989 841 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 IGHA1P01876 353 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 INHAP05111 366 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 CETPP11597 493 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 VAC14Q08AM6 782 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 HFE2Q6ZVN8 426 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 TRIM50Q86XT4 487 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 PLPP7Q8NBV4 271 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 CABP1Q9NZU7 370 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 NOD1Q9Y239 953 aa5.22□□□□□ -1.57
CNGA1-203ENST00000420489 PFASO15067 1338 aa5.21□□□□□ -1.57
CNGA1-203ENST00000420489 MYO3BQ8WXR4 1341 aa5.21□□□□□ -1.57
CNGA1-203ENST00000420489 ADCY3O60266 1144 aa5.21□□□□□ -1.58
CNGA1-203ENST00000420489 BCRP11274 1271 aa5.21□□□□□ -1.58
CNGA1-203ENST00000420489 OXLD1Q5BKU9 147 aa5.21□□□□□ -1.58
CNGA1-203ENST00000420489 TBC1D9BQ66K14 1250 aa5.21□□□□□ -1.58
CNGA1-203ENST00000420489 UIMC1Q96RL1 719 aa5.21□□□□□ -1.58
CNGA1-203ENST00000420489 GPC6Q9Y625 555 aaPredicted RBP5.21□□□□□ -1.58
CNGA1-203ENST00000420489 HMGCRP04035 888 aa5.21□□□□□ -1.58
CNGA1-203ENST00000420489 IREB2P48200 963 aaKnown RBP5.21□□□□□ -1.58
CNGA1-203ENST00000420489 KCNQ1P51787 676 aa5.21□□□□□ -1.58
CNGA1-203ENST00000420489 DBN1Q16643 649 aa5.21□□□□□ -1.58
CNGA1-203ENST00000420489 KANK4Q5T7N3 995 aaPredicted RBP5.21□□□□□ -1.58
CNGA1-203ENST00000420489 NBPF6Q5VWK0 638 aa5.21□□□□□ -1.58
CNGA1-203ENST00000420489 PODNQ7Z5L7 613 aa5.21□□□□□ -1.58
CNGA1-203ENST00000420489 ANKRD13AQ8IZ07 590 aa5.21□□□□□ -1.58
CNGA1-203ENST00000420489 RNPC3Q96LT9 517 aaKnown RBP5.21□□□□□ -1.58
CNGA1-203ENST00000420489 NBPF4Q96M43 638 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms