RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 PAGR1Q9BTK6 254 aa12.12□□□□□ -0.47
PKP4-203ENST00000411900 PUS7LQ9H0K6 701 aaKnown RBP12.12□□□□□ -0.47
PKP4-203ENST00000411900 RNF208Q9H0X6 261 aa12.12□□□□□ -0.47
PKP4-203ENST00000411900 UNC93B1Q9H1C4 597 aa12.12□□□□□ -0.47
PKP4-203ENST00000411900 UBE3CQ15386 1083 aa12.11□□□□□ -0.47
PKP4-203ENST00000411900 Q3C1V9 767 aa12.11□□□□□ -0.47
PKP4-203ENST00000411900 CLEC10AQ8IUN9 316 aa12.11□□□□□ -0.47
PKP4-203ENST00000411900 STK11IPQ8N1F8 1099 aa12.11□□□□□ -0.47
PKP4-203ENST00000411900 OTUD7AQ8TE49 926 aaPredicted RBP12.11□□□□□ -0.47
PKP4-203ENST00000411900 SHISA4Q96DD7 197 aa12.11□□□□□ -0.47
PKP4-203ENST00000411900 GPATCH3Q96I76 525 aa12.11□□□□□ -0.47
PKP4-203ENST00000411900 SLC4A4Q9Y6R1 1079 aa12.11□□□□□ -0.47
PKP4-203ENST00000411900 USP17L12C9JPN9 530 aa12.1□□□□□ -0.47
PKP4-203ENST00000411900 USP17L21D6R901 530 aa12.1□□□□□ -0.47
PKP4-203ENST00000411900 VCAM1P19320 739 aa12.1□□□□□ -0.47
PKP4-203ENST00000411900 ZSCAN25Q6NSZ9 544 aa12.1□□□□□ -0.47
PKP4-203ENST00000411900 POTEEQ6S8J3 1075 aa12.1□□□□□ -0.47
PKP4-203ENST00000411900 GPRC5AQ8NFJ5 357 aa12.1□□□□□ -0.47
PKP4-203ENST00000411900 ATP8A2Q9NTI2 1148 aa12.1□□□□□ -0.47
PKP4-203ENST00000411900 RBPJLQ9UBG7 517 aa12.1□□□□□ -0.47
PKP4-203ENST00000411900 MORF4L1Q9UBU8 362 aa12.1□□□□□ -0.47
PKP4-203ENST00000411900 A0A1W2PRG0 241 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 USP17L15C9J2P7 530 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 USP17L13C9JLJ4 530 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 USP17L11C9JVI0 530 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 USP17L18D6R9N7 530 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 USP17L22D6RA61 530 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 USP17L17D6RBQ6 530 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 USP17L19D6RCP7 530 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 USP17L20D6RJB6 530 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 AKR1B1P15121 316 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 CYP2B6P20813 491 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 USP14P54578 494 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 ERVK-9P63128 1117 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 ERVK-24P63145 666 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 USP17L24Q0WX57 530 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 TRIM32Q13049 653 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 IRF5Q13568 498 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 KBTBD3Q8NAB2 608 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 DDRGK1Q96HY6 314 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 C12orf42Q96LP6 360 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 KIAA1683Q9H0B3 1180 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 PORCNQ9H237 461 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 RPAP3Q9H6T3 665 aaPredicted RBP12.09□□□□□ -0.47
PKP4-203ENST00000411900 GJD2Q9UKL4 321 aa12.09□□□□□ -0.47
PKP4-203ENST00000411900 GJB1P08034 283 aa12.08□□□□□ -0.48
PKP4-203ENST00000411900 GJA8P48165 433 aa12.08□□□□□ -0.48
PKP4-203ENST00000411900 CDK8P49336 464 aa12.08□□□□□ -0.48
PKP4-203ENST00000411900 C12orf60Q5U649 245 aa12.08□□□□□ -0.48
PKP4-203ENST00000411900 CTR9Q6PD62 1173 aa12.08□□□□□ -0.48
PKP4-203ENST00000411900 SAMD1Q6SPF0 538 aaPredicted RBP12.08□□□□□ -0.48
PKP4-203ENST00000411900 CATSPERGQ6ZRH7 1159 aa12.08□□□□□ -0.48
PKP4-203ENST00000411900 CCAR1Q8IX12 1150 aaKnown RBP12.08□□□□□ -0.48
PKP4-203ENST00000411900 AMOTL1Q8IY63 956 aa12.08□□□□□ -0.48
PKP4-203ENST00000411900 PXYLP1Q8TE99 480 aa12.08□□□□□ -0.48
PKP4-203ENST00000411900 U2AF1L4Q8WU68 220 aaKnown RBP12.08□□□□□ -0.48
PKP4-203ENST00000411900 OSBP2Q969R2 916 aa12.08□□□□□ -0.48
PKP4-203ENST00000411900 CWC22Q9HCG8 908 aaKnown RBP12.08□□□□□ -0.48
PKP4-203ENST00000411900 SWAP70Q9UH65 585 aa12.08□□□□□ -0.48
PKP4-203ENST00000411900 M0R2C6 588 aa12.07□□□□□ -0.48
PKP4-203ENST00000411900 RNF113AO15541 343 aaKnown RBP12.07□□□□□ -0.48
PKP4-203ENST00000411900 CNMDO75829 334 aa12.07□□□□□ -0.48
PKP4-203ENST00000411900 ATP2B2Q01814 1243 aa12.07□□□□□ -0.48
PKP4-203ENST00000411900 KIAA1755Q5JYT7 1200 aa12.07□□□□□ -0.48
PKP4-203ENST00000411900 ANKRD45Q5TZF3 282 aa12.07□□□□□ -0.48
PKP4-203ENST00000411900 WDR78Q5VTH9 848 aa12.07□□□□□ -0.48
PKP4-203ENST00000411900 ERICH6BQ5W0A0 696 aa12.07□□□□□ -0.48
PKP4-203ENST00000411900 TMEM179Q6ZVK1 233 aa12.07□□□□□ -0.48
PKP4-203ENST00000411900 NKX2-3Q8TAU0 364 aa12.07□□□□□ -0.48
PKP4-203ENST00000411900 TRIB2Q92519 343 aa12.07□□□□□ -0.48
PKP4-203ENST00000411900 APPBP2Q92624 585 aa12.07□□□□□ -0.48
PKP4-203ENST00000411900 DEFB118Q96PH6 123 aa12.07□□□□□ -0.48
PKP4-203ENST00000411900 STRBPQ96SI9 672 aaKnown RBP12.07□□□□□ -0.48
PKP4-203ENST00000411900 TANGO6Q9C0B7 1094 aa12.07□□□□□ -0.48
PKP4-203ENST00000411900 RLFQ13129 1914 aa12.06□□□□□ -0.48
PKP4-203ENST00000411900 SPDYE16A6NNV3 312 aaPredicted RBP12.06□□□□□ -0.48
PKP4-203ENST00000411900 MINDY4BA8MYZ0 360 aa12.06□□□□□ -0.48
PKP4-203ENST00000411900 GPAA1O43292 621 aa12.06□□□□□ -0.48
PKP4-203ENST00000411900 SGPL1O95470 568 aa12.06□□□□□ -0.48
PKP4-203ENST00000411900 TFRCP02786 760 aaKnown RBP12.06□□□□□ -0.48
PKP4-203ENST00000411900 ICA1Q05084 483 aa12.06□□□□□ -0.48
PKP4-203ENST00000411900 C16orf86Q6ZW13 317 aa12.06□□□□□ -0.48
PKP4-203ENST00000411900 GPR142Q7Z601 462 aa12.06□□□□□ -0.48
PKP4-203ENST00000411900 SIAH1Q8IUQ4 282 aa12.06□□□□□ -0.48
PKP4-203ENST00000411900 SPICE1Q8N0Z3 855 aa12.06□□□□□ -0.48
PKP4-203ENST00000411900 PI4K2BQ8TCG2 481 aa12.06□□□□□ -0.48
PKP4-203ENST00000411900 GTF3C2Q8WUA4 911 aaPredicted RBP12.06□□□□□ -0.48
PKP4-203ENST00000411900 SEC62Q99442 399 aaKnown RBP12.06□□□□□ -0.48
PKP4-203ENST00000411900 NUDT12Q9BQG2 462 aa12.06□□□□□ -0.48
PKP4-203ENST00000411900 BTBD7Q9P203 1132 aa12.06□□□□□ -0.48
PKP4-203ENST00000411900 RABGAP1Q9Y3P9 1069 aa12.06□□□□□ -0.48
PKP4-203ENST00000411900 PARP14Q460N5 1801 aa12.06□□□□□ -0.48
PKP4-203ENST00000411900 TTC41PQ6P2S7 1318 aa12.06□□□□□ -0.48
PKP4-203ENST00000411900 COL11A1P12107 1806 aaPredicted RBP12.05□□□□□ -0.48
PKP4-203ENST00000411900 GSG1L2A8MUP6 293 aa12.05□□□□□ -0.48
PKP4-203ENST00000411900 ERC2O15083 957 aa12.05□□□□□ -0.48
PKP4-203ENST00000411900 RAD21O60216 631 aa12.05□□□□□ -0.48
PKP4-203ENST00000411900 FARP2O94887 1054 aaPredicted RBP12.05□□□□□ -0.48
PKP4-203ENST00000411900 HMGCRP04035 888 aa12.05□□□□□ -0.48
PKP4-203ENST00000411900 APPP05067 770 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms