RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 TRIM34Q9BYJ4 488 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 USP44Q9H0E7 712 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 SIL1Q9H173 461 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 PRDM12Q9H4Q4 367 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 PRKRIP1Q9H875 184 aaPredicted RBP2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 EMILIN3Q9NT22 766 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 TMEM39AQ9NV64 488 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 SLC5A4Q9NY91 659 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 FLRT1Q9NZU1 646 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 RAI14Q9P0K7 980 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 CXXC1Q9P0U4 656 aaPredicted RBP2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 ZBTB21Q9ULJ3 1066 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 HDAC5Q9UQL6 1122 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 NDUFB9Q9Y6M9 179 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 MUC3AQ02505 3323 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 ARAP2Q8WZ64 1704 aa2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 PDS5AQ29RF7 1337 aaKnown RBP2.93□□□□□ -1.94
RNU4-53P-201ENST00000410828 BRWD1Q9NSI6 2320 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 RIF1Q5UIP0 2472 aaKnown RBP2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 ALPK3Q96L96 1907 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 CACNA1GO43497 2377 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 A0A1B0GUL7 405 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 DCDC2CA8MYV0 355 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 PQBP1O60828 265 aaKnown RBP2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 CNMDO75829 334 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 GDF11O95390 407 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 BAG3O95817 575 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 GH2P01242 217 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 IGHA2P01877 340 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 HLA-DOAP06340 250 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 RARBP10826 455 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 BMP1P13497 986 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 PLCG2P16885 1265 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 ITGB8P26012 769 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 ADORA2AP29274 412 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 ADORA1P30542 326 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 IL15P40933 162 aaPredicted RBP2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 TIMM10P62072 90 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 PPIGQ13427 754 aaKnown RBP eCLIP2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 ADGRE1Q14246 886 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 MVPQ14764 893 aaKnown RBP2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 RAB30Q15771 203 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 TMEM31Q5JXX7 168 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 ANO1Q5XXA6 986 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 MFSD5Q6N075 450 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 LBX2Q6XYB7 198 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 CATSPERGQ6ZRH7 1159 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 RNF180Q86T96 592 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 ABRAQ8N0Z2 381 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 SLC44A5Q8NCS7 719 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 SHCBP1Q8NEM2 672 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 NUP133Q8WUM0 1156 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 HERVK_113Q902F9 699 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 NSUN4Q96CB9 384 aaKnown RBP2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 C12orf42Q96LP6 360 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 TOX2Q96NM4 488 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 NECAB3Q96P71 396 aaPredicted RBP2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 FEZ1Q99689 392 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 LRFN3Q9BTN0 628 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 PBX4Q9BYU1 374 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 EPHX3Q9H6B9 360 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 SLC28A3Q9HAS3 691 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 XPNPEP3Q9NQH7 507 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 STARD7Q9NQZ5 370 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 HOXC10Q9NYD6 342 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 LRP2BPQ9P2M1 347 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 NRBP1Q9UHY1 535 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 MSRAQ9UJ68 235 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 PHF24Q9UPV7 400 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 AKAP2Q9Y2D5 859 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 SALL2Q9Y467 1007 aaPredicted RBP2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 DDX60LQ5H9U9 1706 aaKnown RBP2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 CACNA1AO00555 2505 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 PRRC2BQ5JSZ5 2229 aaKnown RBP2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 PTPRCP08575 1304 aa2.92□□□□□ -1.94
RNU4-53P-201ENST00000410828 AK9Q5TCS8 1911 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 SPEF2Q9C093 1822 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 MGAMO43451 1857 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 SPDYE16A6NNV3 312 aaPredicted RBP2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 GRXCR1A8MXD5 290 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 APBB1O00213 710 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 GPR37L1O60883 481 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 IGSF3O75054 1194 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 COBLO75128 1261 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 PGK1P00558 417 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 TIMP1P01033 207 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 UBTFL1P0CB47 393 aaPredicted RBP2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 FCER1AP12319 257 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 VCAM1P19320 739 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 ERCC3P19447 782 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 PBX2P40425 430 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 PPP4CP60510 307 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 JAG1P78504 1218 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 FAAP100Q0VG06 881 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 COG2Q14746 738 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 RAB3GAP1Q15042 981 aa2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 SKIV2LQ15477 1246 aaKnown RBP2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 ZYXQ15942 572 aaKnown RBP2.91□□□□□ -1.94
RNU4-53P-201ENST00000410828 FAM47AQ5JRC9 791 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms