RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 BAHD1Q8TBE0 780 aaPredicted RBP7.6□□□□□ -1.19
LSM5-206ENST00000409987 XAGE3Q8WTP9 111 aa7.6□□□□□ -1.19
LSM5-206ENST00000409987 CYB5D2Q8WUJ1 264 aa7.6□□□□□ -1.19
LSM5-206ENST00000409987 FBLIM1Q8WUP2 373 aa7.6□□□□□ -1.19
LSM5-206ENST00000409987 CCDC74BQ96LY2 380 aa7.6□□□□□ -1.19
LSM5-206ENST00000409987 SEMA6CQ9H3T2 930 aa7.6□□□□□ -1.19
LSM5-206ENST00000409987 PHAXQ9H814 394 aaKnown RBP7.6□□□□□ -1.19
LSM5-206ENST00000409987 DAGLAQ9Y4D2 1042 aa7.6□□□□□ -1.19
LSM5-206ENST00000409987 LRIG2O94898 1065 aa7.59□□□□□ -1.19
LSM5-206ENST00000409987 NFICP08651 508 aa7.59□□□□□ -1.19
LSM5-206ENST00000409987 CCNFP41002 786 aa7.59□□□□□ -1.19
LSM5-206ENST00000409987 RASGRF1Q13972 1273 aa7.59□□□□□ -1.19
LSM5-206ENST00000409987 ALYREFQ86V81 257 aaKnown RBP7.59□□□□□ -1.19
LSM5-206ENST00000409987 ARMC10Q8N2F6 343 aa7.59□□□□□ -1.19
LSM5-206ENST00000409987 KLHL6Q8WZ60 621 aa7.59□□□□□ -1.19
LSM5-206ENST00000409987 EZH1Q92800 747 aaPredicted RBP7.59□□□□□ -1.19
LSM5-206ENST00000409987 LGR6Q9HBX8 967 aa7.59□□□□□ -1.19
LSM5-206ENST00000409987 ZNF214Q9UL59 606 aaPredicted RBP7.59□□□□□ -1.19
LSM5-206ENST00000409987 MRPL42Q9Y6G3 142 aaKnown RBP7.59□□□□□ -1.19
LSM5-206ENST00000409987 DYNC1LI2O43237 492 aaPredicted RBP7.58□□□□□ -1.2
LSM5-206ENST00000409987 SDE2Q6IQ49 451 aa7.58□□□□□ -1.2
LSM5-206ENST00000409987 TXNRD3Q86VQ6 643 aa7.58□□□□□ -1.2
LSM5-206ENST00000409987 PPFIBP1Q86W92 1011 aa7.58□□□□□ -1.2
LSM5-206ENST00000409987 PPP1R13LQ8WUF5 828 aa7.58□□□□□ -1.2
LSM5-206ENST00000409987 UTP4Q969X6 686 aaKnown RBP7.58□□□□□ -1.2
LSM5-206ENST00000409987 MYRFLQ96LU7 910 aa7.58□□□□□ -1.2
LSM5-206ENST00000409987 SLC6A18Q96N87 628 aa7.58□□□□□ -1.2
LSM5-206ENST00000409987 KRBA1A5PL33 1030 aa7.57□□□□□ -1.2
LSM5-206ENST00000409987 BMP3P12645 472 aa7.57□□□□□ -1.2
LSM5-206ENST00000409987 GBP1P32455 592 aa7.57□□□□□ -1.2
LSM5-206ENST00000409987 PMS1P54277 932 aaKnown RBP7.57□□□□□ -1.2
LSM5-206ENST00000409987 NCAPHQ15003 741 aa7.57□□□□□ -1.2
LSM5-206ENST00000409987 UVSSAQ2YD98 709 aa7.57□□□□□ -1.2
LSM5-206ENST00000409987 KIAA1211LQ6NV74 962 aa7.57□□□□□ -1.2
LSM5-206ENST00000409987 SEZ6L2Q6UXD5 910 aa7.57□□□□□ -1.2
LSM5-206ENST00000409987 MFSD2AQ8NA29 543 aa7.57□□□□□ -1.2
LSM5-206ENST00000409987 DNAJB8Q8NHS0 232 aa7.57□□□□□ -1.2
LSM5-206ENST00000409987 PSMG3-AS1Q96PY0 264 aa7.57□□□□□ -1.2
LSM5-206ENST00000409987 DNAJC7Q99615 494 aa7.57□□□□□ -1.2
LSM5-206ENST00000409987 SUCOQ9UBS9 1254 aaKnown RBP7.57□□□□□ -1.2
LSM5-206ENST00000409987 SLITRK5O94991 958 aa7.56□□□□□ -1.2
LSM5-206ENST00000409987 MAP4P27816 1152 aaKnown RBP7.56□□□□□ -1.2
LSM5-206ENST00000409987 CHRNA4P43681 627 aa7.56□□□□□ -1.2
LSM5-206ENST00000409987 SLC7A5Q01650 507 aa7.56□□□□□ -1.2
LSM5-206ENST00000409987 GNPTABQ3T906 1256 aa7.56□□□□□ -1.2
LSM5-206ENST00000409987 FAM20CQ8IXL6 584 aa7.56□□□□□ -1.2
LSM5-206ENST00000409987 LILRB2Q8N423 598 aa7.56□□□□□ -1.2
LSM5-206ENST00000409987 DHRS1Q96LJ7 313 aa7.56□□□□□ -1.2
LSM5-206ENST00000409987 RNPC3Q96LT9 517 aaKnown RBP7.56□□□□□ -1.2
LSM5-206ENST00000409987 YIPF2Q9BWQ6 316 aa7.56□□□□□ -1.2
LSM5-206ENST00000409987 COL17A1Q9UMD9 1497 aaPredicted RBP7.55□□□□□ -1.2
LSM5-206ENST00000409987 C9IYK1 514 aa7.55□□□□□ -1.2
LSM5-206ENST00000409987 RXRBP28702 533 aa7.55□□□□□ -1.2
LSM5-206ENST00000409987 IFRD2Q12894 506 aaPredicted RBP7.55□□□□□ -1.2
LSM5-206ENST00000409987 MAP7Q14244 749 aa7.55□□□□□ -1.2
LSM5-206ENST00000409987 TDRD10Q5VZ19 366 aaKnown RBP7.55□□□□□ -1.2
LSM5-206ENST00000409987 RIN3Q8TB24 985 aa7.55□□□□□ -1.2
LSM5-206ENST00000409987 MIPEPQ99797 713 aa7.55□□□□□ -1.2
LSM5-206ENST00000409987 SSBP4Q9BWG4 385 aaPredicted RBP7.55□□□□□ -1.2
LSM5-206ENST00000409987 KANSL2Q9H9L4 492 aa7.55□□□□□ -1.2
LSM5-206ENST00000409987 CEP131Q9UPN4 1083 aa7.55□□□□□ -1.2
LSM5-206ENST00000409987 FAM95CA0A1B0GW59 222 aa7.54□□□□□ -1.2
LSM5-206ENST00000409987 RBAK-RBAKDNI3L0D1 243 aa7.54□□□□□ -1.2
LSM5-206ENST00000409987 CLEC3AO75596 197 aa7.54□□□□□ -1.2
LSM5-206ENST00000409987 CDK5R2Q13319 367 aa7.54□□□□□ -1.2
LSM5-206ENST00000409987 MTERF2Q49AM1 385 aa7.54□□□□□ -1.2
LSM5-206ENST00000409987 LETMD1Q6P1Q0 360 aa7.54□□□□□ -1.2
LSM5-206ENST00000409987 SPATC1Q76KD6 591 aa7.54□□□□□ -1.2
LSM5-206ENST00000409987 CD163Q86VB7 1156 aa7.54□□□□□ -1.2
LSM5-206ENST00000409987 ST13P5Q8NFI4 369 aaPredicted RBP7.54□□□□□ -1.2
LSM5-206ENST00000409987 ZNF512BQ96KM6 892 aaPredicted RBP7.54□□□□□ -1.2
LSM5-206ENST00000409987 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.54□□□□□ -1.2
LSM5-206ENST00000409987 PRDM10Q9NQV6 1147 aa7.54□□□□□ -1.2
LSM5-206ENST00000409987 C1GALT1Q9NS00 363 aa7.54□□□□□ -1.2
LSM5-206ENST00000409987 FAM86C1Q9NVL1 165 aa7.54□□□□□ -1.2
LSM5-206ENST00000409987 SUSD5O60279 629 aa7.53□□□□□ -1.2
LSM5-206ENST00000409987 DIAPH1O60610 1272 aaKnown RBP7.53□□□□□ -1.2
LSM5-206ENST00000409987 TP53P04637 393 aaPredicted RBP7.53□□□□□ -1.2
LSM5-206ENST00000409987 BBS9Q3SYG4 887 aa7.53□□□□□ -1.2
LSM5-206ENST00000409987 EEPD1Q7L9B9 569 aa7.53□□□□□ -1.2
LSM5-206ENST00000409987 VWCEQ96DN2 955 aa7.53□□□□□ -1.2
LSM5-206ENST00000409987 SUSD2Q9UGT4 822 aa7.53□□□□□ -1.2
LSM5-206ENST00000409987 PFDN2Q9UHV9 154 aa7.53□□□□□ -1.2
LSM5-206ENST00000409987 ZMYM5Q9UJ78 669 aa7.53□□□□□ -1.2
LSM5-206ENST00000409987 C1QTNF9BB2RNN3 333 aa7.52□□□□□ -1.21
LSM5-206ENST00000409987 CANXP27824 592 aaKnown RBP7.52□□□□□ -1.21
LSM5-206ENST00000409987 TCEAL1Q15170 157 aa7.52□□□□□ -1.21
LSM5-206ENST00000409987 NFKBIBQ15653 356 aa7.52□□□□□ -1.21
LSM5-206ENST00000409987 SLC10A6Q3KNW5 377 aa7.52□□□□□ -1.21
LSM5-206ENST00000409987 AXDND1Q5T1B0 1012 aaPredicted RBP7.52□□□□□ -1.21
LSM5-206ENST00000409987 NBPF12Q5TAG4 269 aaPredicted RBP7.52□□□□□ -1.21
LSM5-206ENST00000409987 BEND4Q6ZU67 534 aa7.52□□□□□ -1.21
LSM5-206ENST00000409987 CDH24Q86UP0 819 aa7.52□□□□□ -1.21
LSM5-206ENST00000409987 TOP6BLQ8N6T0 577 aa7.52□□□□□ -1.21
LSM5-206ENST00000409987 SH3TC2Q8TF17 1288 aa7.52□□□□□ -1.21
LSM5-206ENST00000409987 DCAF5Q96JK2 942 aa7.52□□□□□ -1.21
LSM5-206ENST00000409987 KREMEN1Q96MU8 473 aa7.52□□□□□ -1.21
LSM5-206ENST00000409987 KCNF1Q9H3M0 494 aa7.52□□□□□ -1.21
LSM5-206ENST00000409987 DHX15O43143 795 aaKnown RBP7.51□□□□□ -1.21
LSM5-206ENST00000409987 CBFA2T2O43439 604 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms