RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 RABGAP1Q9Y3P9 1069 aa17.54■□□□□ 0.4
MCF2L-210ENST00000409954 H0YGN5 161 aa17.53■□□□□ 0.4
MCF2L-210ENST00000409954 FARP2O94887 1054 aaPredicted RBP17.53■□□□□ 0.4
MCF2L-210ENST00000409954 ADD2P35612 726 aa17.53■□□□□ 0.4
MCF2L-210ENST00000409954 CCNA1P78396 465 aa17.53■□□□□ 0.4
MCF2L-210ENST00000409954 CRISPLD2Q9H0B8 497 aa17.53■□□□□ 0.4
MCF2L-210ENST00000409954 TXNRD2Q9NNW7 524 aa17.53■□□□□ 0.4
MCF2L-210ENST00000409954 ZSWIM8A7E2V4 1837 aa17.53■□□□□ 0.4
MCF2L-210ENST00000409954 GLRX3O76003 335 aaKnown RBP17.52■□□□□ 0.4
MCF2L-210ENST00000409954 UBE3CQ15386 1083 aa17.52■□□□□ 0.4
MCF2L-210ENST00000409954 ANKLE1Q8NAG6 615 aa17.52■□□□□ 0.4
MCF2L-210ENST00000409954 DDRGK1Q96HY6 314 aa17.52■□□□□ 0.4
MCF2L-210ENST00000409954 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.52■□□□□ 0.4
MCF2L-210ENST00000409954 HOXC10Q9NYD6 342 aa17.52■□□□□ 0.4
MCF2L-210ENST00000409954 PTPRFP10586 1907 aa17.51■□□□□ 0.39
MCF2L-210ENST00000409954 CYP2B6P20813 491 aa17.51■□□□□ 0.39
MCF2L-210ENST00000409954 ZYXQ15942 572 aaKnown RBP17.51■□□□□ 0.39
MCF2L-210ENST00000409954 LBX2Q6XYB7 198 aa17.51■□□□□ 0.39
MCF2L-210ENST00000409954 PLEKHH3Q7Z736 793 aa17.51■□□□□ 0.39
MCF2L-210ENST00000409954 AMOTL1Q8IY63 956 aa17.51■□□□□ 0.39
MCF2L-210ENST00000409954 LCORLQ8N3X6 602 aa17.51■□□□□ 0.39
MCF2L-210ENST00000409954 ACER1Q8TDN7 264 aa17.51■□□□□ 0.39
MCF2L-210ENST00000409954 SDR42E1Q8WUS8 393 aa17.51■□□□□ 0.39
MCF2L-210ENST00000409954 EDC3Q96F86 508 aaKnown RBP17.51■□□□□ 0.39
MCF2L-210ENST00000409954 CCDC17Q96LX7 622 aa17.51■□□□□ 0.39
MCF2L-210ENST00000409954 PAGR1Q9BTK6 254 aa17.51■□□□□ 0.39
MCF2L-210ENST00000409954 ARMT1Q9H993 441 aa17.51■□□□□ 0.39
MCF2L-210ENST00000409954 COLQQ9Y215 455 aaPredicted RBP17.51■□□□□ 0.39
MCF2L-210ENST00000409954 MPHOSPH10O00566 681 aaKnown RBP17.5■□□□□ 0.39
MCF2L-210ENST00000409954 GUCY1A2P33402 732 aa17.5■□□□□ 0.39
MCF2L-210ENST00000409954 RGS2P41220 211 aa17.5■□□□□ 0.39
MCF2L-210ENST00000409954 COG2Q14746 738 aa17.5■□□□□ 0.39
MCF2L-210ENST00000409954 SEPT2Q15019 361 aa17.5■□□□□ 0.39
MCF2L-210ENST00000409954 C20orf194Q5TEA3 1177 aa17.5■□□□□ 0.39
MCF2L-210ENST00000409954 GPR142Q7Z601 462 aa17.5■□□□□ 0.39
MCF2L-210ENST00000409954 NECAB2Q7Z6G3 386 aa17.5■□□□□ 0.39
MCF2L-210ENST00000409954 USP6NLQ92738 828 aa17.5■□□□□ 0.39
MCF2L-210ENST00000409954 DCTPP1Q9H773 170 aa17.5■□□□□ 0.39
MCF2L-210ENST00000409954 CWC22Q9HCG8 908 aaKnown RBP17.5■□□□□ 0.39
MCF2L-210ENST00000409954 MAST2Q6P0Q8 1798 aa17.5■□□□□ 0.39
MCF2L-210ENST00000409954 CENPFP49454 3210 aa17.49■□□□□ 0.39
MCF2L-210ENST00000409954 VCAM1P19320 739 aa17.49■□□□□ 0.39
MCF2L-210ENST00000409954 MORN1Q5T089 497 aa17.49■□□□□ 0.39
MCF2L-210ENST00000409954 TMEM179Q6ZVK1 233 aa17.49■□□□□ 0.39
MCF2L-210ENST00000409954 PORCNQ9H237 461 aa17.49■□□□□ 0.39
MCF2L-210ENST00000409954 EVI5O60447 810 aa17.48■□□□□ 0.39
MCF2L-210ENST00000409954 PEX10O60683 326 aa17.48■□□□□ 0.39
MCF2L-210ENST00000409954 MBD4O95243 580 aa17.48■□□□□ 0.39
MCF2L-210ENST00000409954 C12orf60Q5U649 245 aa17.48■□□□□ 0.39
MCF2L-210ENST00000409954 POTEEQ6S8J3 1075 aa17.48■□□□□ 0.39
MCF2L-210ENST00000409954 TRIB2Q92519 343 aa17.48■□□□□ 0.39
MCF2L-210ENST00000409954 PAWRQ96IZ0 340 aaKnown RBP17.48■□□□□ 0.39
MCF2L-210ENST00000409954 RPAP3Q9H6T3 665 aaPredicted RBP17.48■□□□□ 0.39
MCF2L-210ENST00000409954 ECHDC1Q9NTX5 307 aa17.48■□□□□ 0.39
MCF2L-210ENST00000409954 MGAMO43451 1857 aa17.48■□□□□ 0.39
MCF2L-210ENST00000409954 SLC15A5A6NIM6 579 aa17.47■□□□□ 0.39
MCF2L-210ENST00000409954 USP17L12C9JPN9 530 aa17.47■□□□□ 0.39
MCF2L-210ENST00000409954 USP17L21D6R901 530 aa17.47■□□□□ 0.39
MCF2L-210ENST00000409954 PRKAB2O43741 272 aa17.47■□□□□ 0.39
MCF2L-210ENST00000409954 MAP2K5Q13163 448 aa17.47■□□□□ 0.39
MCF2L-210ENST00000409954 MAP3K21Q5TCX8 1036 aa17.47■□□□□ 0.39
MCF2L-210ENST00000409954 GPATCH3Q96I76 525 aa17.47■□□□□ 0.39
MCF2L-210ENST00000409954 SH2D4AQ9H788 454 aa17.47■□□□□ 0.39
MCF2L-210ENST00000409954 LOC285556D6RIA3 1793 aa17.47■□□□□ 0.39
MCF2L-210ENST00000409954 SIPA1L1O43166 1804 aa17.47■□□□□ 0.39
MCF2L-210ENST00000409954 MYO5AQ9Y4I1 1855 aaKnown RBP17.46■□□□□ 0.39
MCF2L-210ENST00000409954 A0A1W2PRG0 241 aa17.46■□□□□ 0.39
MCF2L-210ENST00000409954 SMARCA5O60264 1052 aaPredicted RBP17.46■□□□□ 0.39
MCF2L-210ENST00000409954 CNMDO75829 334 aa17.46■□□□□ 0.39
MCF2L-210ENST00000409954 ZKSCAN1P17029 563 aaPredicted RBP17.46■□□□□ 0.39
MCF2L-210ENST00000409954 PTPREP23469 700 aa17.46■□□□□ 0.39
MCF2L-210ENST00000409954 CDK8P49336 464 aa17.46■□□□□ 0.39
MCF2L-210ENST00000409954 TRIM32Q13049 653 aa17.46■□□□□ 0.39
MCF2L-210ENST00000409954 LPAR1Q92633 364 aa17.46■□□□□ 0.39
MCF2L-210ENST00000409954 NBPF3Q9H094 633 aa17.46■□□□□ 0.39
MCF2L-210ENST00000409954 ARHGEF10LQ9HCE6 1279 aa17.46■□□□□ 0.39
MCF2L-210ENST00000409954 OGDHLQ9ULD0 1010 aa17.46■□□□□ 0.39
MCF2L-210ENST00000409954 TMX2Q9Y320 296 aa17.46■□□□□ 0.39
MCF2L-210ENST00000409954 SLC4A4Q9Y6R1 1079 aa17.46■□□□□ 0.39
MCF2L-210ENST00000409954 IVNS1ABPQ9Y6Y0 642 aa17.46■□□□□ 0.39
MCF2L-210ENST00000409954 STRNO43815 780 aa17.45■□□□□ 0.38
MCF2L-210ENST00000409954 CYP2D6P10635 497 aa17.45■□□□□ 0.38
MCF2L-210ENST00000409954 PRKAR2AP13861 404 aaKnown RBP17.45■□□□□ 0.38
MCF2L-210ENST00000409954 CACNB2Q08289 660 aaPredicted RBP17.45■□□□□ 0.38
MCF2L-210ENST00000409954 MB21D1Q8N884 522 aa17.45■□□□□ 0.38
MCF2L-210ENST00000409954 DYNLL2Q96FJ2 89 aa17.45■□□□□ 0.38
MCF2L-210ENST00000409954 BTBD7Q9P203 1132 aa17.45■□□□□ 0.38
MCF2L-210ENST00000409954 FOCADQ5VW36 1801 aa17.44■□□□□ 0.38
MCF2L-210ENST00000409954 ATAD5Q96QE3 1844 aa17.44■□□□□ 0.38
MCF2L-210ENST00000409954 DOCK3Q8IZD9 2030 aa17.44■□□□□ 0.38
MCF2L-210ENST00000409954 SPDYE16A6NNV3 312 aaPredicted RBP17.44■□□□□ 0.38
MCF2L-210ENST00000409954 HOXC6P09630 235 aa17.44■□□□□ 0.38
MCF2L-210ENST00000409954 LRRFIP1Q32MZ4 808 aaKnown RBP17.44■□□□□ 0.38
MCF2L-210ENST00000409954 SLFNL1Q499Z3 407 aa17.44■□□□□ 0.38
MCF2L-210ENST00000409954 MFSD14CQ5VZR4 134 aa17.44■□□□□ 0.38
MCF2L-210ENST00000409954 GIMAP6Q6P9H5 292 aa17.44■□□□□ 0.38
MCF2L-210ENST00000409954 CHRDL2Q6WN34 429 aa17.44■□□□□ 0.38
MCF2L-210ENST00000409954 C16orf86Q6ZW13 317 aa17.44■□□□□ 0.38
MCF2L-210ENST00000409954 SIAH1Q8IUQ4 282 aa17.44■□□□□ 0.38
MCF2L-210ENST00000409954 KBTBD3Q8NAB2 608 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms