RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 CPDO75976 1380 aa15.21■□□□□ 0.03
COL6A2-204ENST00000409416 PTPROQ16827 1216 aa15.21■□□□□ 0.02
COL6A2-204ENST00000409416 KCTD19Q17RG1 926 aaPredicted RBP15.21■□□□□ 0.02
COL6A2-204ENST00000409416 CCDC178Q5BJE1 867 aa15.21■□□□□ 0.02
COL6A2-204ENST00000409416 TPTE2Q6XPS3 522 aa15.21■□□□□ 0.02
COL6A2-204ENST00000409416 FOXP4Q8IVH2 680 aaPredicted RBP15.21■□□□□ 0.02
COL6A2-204ENST00000409416 GJA10Q969M2 543 aa15.21■□□□□ 0.02
COL6A2-204ENST00000409416 TMEM87BQ96K49 555 aa15.21■□□□□ 0.02
COL6A2-204ENST00000409416 IRX2Q9BZI1 471 aaPredicted RBP15.21■□□□□ 0.02
COL6A2-204ENST00000409416 RNF41Q9H4P4 317 aaPredicted RBP15.21■□□□□ 0.02
COL6A2-204ENST00000409416 TACC3Q9Y6A5 838 aa15.21■□□□□ 0.02
COL6A2-204ENST00000409416 NAP1L1P55209 391 aaKnown RBP15.2■□□□□ 0.02
COL6A2-204ENST00000409416 ETF1P62495 437 aaKnown RBP15.2■□□□□ 0.02
COL6A2-204ENST00000409416 CCDC96Q2M329 555 aa15.2■□□□□ 0.02
COL6A2-204ENST00000409416 EARS2Q5JPH6 523 aaKnown RBP15.2■□□□□ 0.02
COL6A2-204ENST00000409416 PPFIBP1Q86W92 1011 aa15.2■□□□□ 0.02
COL6A2-204ENST00000409416 CRNKL1Q9BZJ0 848 aaKnown RBP15.2■□□□□ 0.02
COL6A2-204ENST00000409416 MINPP1Q9UNW1 487 aa15.2■□□□□ 0.02
COL6A2-204ENST00000409416 CTNND2Q9UQB3 1225 aa15.2■□□□□ 0.02
COL6A2-204ENST00000409416 EP400Q96L91 3159 aa15.2■□□□□ 0.02
COL6A2-204ENST00000409416 KDM4FA0A1W2PPD8 638 aa15.2■□□□□ 0.02
COL6A2-204ENST00000409416 CUTAO60888 179 aa15.2■□□□□ 0.02
COL6A2-204ENST00000409416 SEC31AO94979 1220 aaKnown RBP15.2■□□□□ 0.02
COL6A2-204ENST00000409416 SNAP25P60880 206 aa15.2■□□□□ 0.02
COL6A2-204ENST00000409416 POSTNQ15063 836 aa15.2■□□□□ 0.02
COL6A2-204ENST00000409416 LRRC47Q8N1G4 583 aaKnown RBP15.2■□□□□ 0.02
COL6A2-204ENST00000409416 LINC00116Q8NCU8 138 aa15.2■□□□□ 0.02
COL6A2-204ENST00000409416 BAG1Q99933 345 aaPredicted RBP15.2■□□□□ 0.02
COL6A2-204ENST00000409416 MROH5Q6ZUA9 1318 aa15.2■□□□□ 0.02
COL6A2-204ENST00000409416 ARFGEF2Q9Y6D5 1785 aa15.2■□□□□ 0.02
COL6A2-204ENST00000409416 CSF1RP07333 972 aa15.2■□□□□ 0.02
COL6A2-204ENST00000409416 EVCP57679 992 aa15.2■□□□□ 0.02
COL6A2-204ENST00000409416 INF2Q27J81 1249 aa15.2■□□□□ 0.02
COL6A2-204ENST00000409416 INTS5Q6P9B9 1019 aaKnown RBP15.2■□□□□ 0.02
COL6A2-204ENST00000409416 IGDCC4Q8TDY8 1250 aa15.2■□□□□ 0.02
COL6A2-204ENST00000409416 GDAP1L1Q96MZ0 367 aa15.2■□□□□ 0.02
COL6A2-204ENST00000409416 TBC1D7Q9P0N9 293 aa15.2■□□□□ 0.02
COL6A2-204ENST00000409416 SCN11AQ9UI33 1791 aa15.19■□□□□ 0.02
COL6A2-204ENST00000409416 CASQ1P31415 396 aa15.19■□□□□ 0.02
COL6A2-204ENST00000409416 PTGDRQ13258 359 aa15.19■□□□□ 0.02
COL6A2-204ENST00000409416 UBE3CQ15386 1083 aa15.19■□□□□ 0.02
COL6A2-204ENST00000409416 TMCO3Q6UWJ1 677 aa15.19■□□□□ 0.02
COL6A2-204ENST00000409416 CCDC34Q96HJ3 373 aa15.19■□□□□ 0.02
COL6A2-204ENST00000409416 NUP88Q99567 741 aaPredicted RBP15.19■□□□□ 0.02
COL6A2-204ENST00000409416 TANGO6Q9C0B7 1094 aa15.19■□□□□ 0.02
COL6A2-204ENST00000409416 TAB2Q9NYJ8 693 aa15.19■□□□□ 0.02
COL6A2-204ENST00000409416 LAMA4Q16363 1823 aa15.19■□□□□ 0.02
COL6A2-204ENST00000409416 CCDC196A0A1B0GTZ2 297 aa15.19■□□□□ 0.02
COL6A2-204ENST00000409416 LDHBP07195 334 aaKnown RBP15.19■□□□□ 0.02
COL6A2-204ENST00000409416 PTPAQ15257 358 aa15.19■□□□□ 0.02
COL6A2-204ENST00000409416 STAG2Q8N3U4 1231 aa15.19■□□□□ 0.02
COL6A2-204ENST00000409416 PSMB7Q99436 277 aa15.19■□□□□ 0.02
COL6A2-204ENST00000409416 ARGLU1Q9NWB6 273 aaPredicted RBP15.19■□□□□ 0.02
COL6A2-204ENST00000409416 MAN1B1Q9UKM7 699 aa15.19■□□□□ 0.02
COL6A2-204ENST00000409416 N4BP3O15049 544 aa15.18■□□□□ 0.02
COL6A2-204ENST00000409416 GTF2IP78347 998 aa15.18■□□□□ 0.02
COL6A2-204ENST00000409416 FMR1Q06787 632 aaKnown RBP eCLIP15.18■□□□□ 0.02
COL6A2-204ENST00000409416 UTP14CQ5TAP6 766 aaKnown RBP15.18■□□□□ 0.02
COL6A2-204ENST00000409416 RESP18Q5W5W9 173 aa15.18■□□□□ 0.02
COL6A2-204ENST00000409416 ENAHQ8N8S7 591 aaPredicted RBP15.18■□□□□ 0.02
COL6A2-204ENST00000409416 WASF1Q92558 559 aa15.18■□□□□ 0.02
COL6A2-204ENST00000409416 ZSCAN12O43309 604 aa15.18■□□□□ 0.02
COL6A2-204ENST00000409416 CLCN6P51797 869 aa15.18■□□□□ 0.02
COL6A2-204ENST00000409416 USP17L2Q6R6M4 530 aa15.18■□□□□ 0.02
COL6A2-204ENST00000409416 CCDC12Q8WUD4 166 aaPredicted RBP15.18■□□□□ 0.02
COL6A2-204ENST00000409416 SYMPKQ92797 1274 aaKnown RBP15.18■□□□□ 0.02
COL6A2-204ENST00000409416 TRIM34Q9BYJ4 488 aa15.18■□□□□ 0.02
COL6A2-204ENST00000409416 USP54Q70EL1 1684 aa15.18■□□□□ 0.02
COL6A2-204ENST00000409416 IKBKBO14920 756 aa15.18■□□□□ 0.02
COL6A2-204ENST00000409416 CCP110O43303 1012 aa15.18■□□□□ 0.02
COL6A2-204ENST00000409416 PPP6R2O75170 966 aa15.18■□□□□ 0.02
COL6A2-204ENST00000409416 EIF5P55010 431 aaKnown RBP15.18■□□□□ 0.02
COL6A2-204ENST00000409416 MRPS25P82663 173 aaKnown RBP15.18■□□□□ 0.02
COL6A2-204ENST00000409416 MTF1Q14872 753 aa15.18■□□□□ 0.02
COL6A2-204ENST00000409416 SYCP1Q15431 976 aa15.18■□□□□ 0.02
COL6A2-204ENST00000409416 ZYXQ15942 572 aaKnown RBP15.18■□□□□ 0.02
COL6A2-204ENST00000409416 ZSCAN10Q96SZ4 725 aaPredicted RBP15.18■□□□□ 0.02
COL6A2-204ENST00000409416 CNNM2Q9H8M5 875 aa15.18■□□□□ 0.02
COL6A2-204ENST00000409416 USP21Q9UK80 565 aa15.18■□□□□ 0.02
COL6A2-204ENST00000409416 PPP2R2CQ9Y2T4 447 aa15.18■□□□□ 0.02
COL6A2-204ENST00000409416 PSDA5PKW4 1024 aaPredicted RBP15.17■□□□□ 0.02
COL6A2-204ENST00000409416 WNT7AO00755 349 aa15.17■□□□□ 0.02
COL6A2-204ENST00000409416 TRIM37O94972 964 aa15.17■□□□□ 0.02
COL6A2-204ENST00000409416 FAM193AP78312 1265 aa15.17■□□□□ 0.02
COL6A2-204ENST00000409416 GRIK5Q16478 980 aa15.17■□□□□ 0.02
COL6A2-204ENST00000409416 DYMQ7RTS9 669 aa15.17■□□□□ 0.02
COL6A2-204ENST00000409416 CNBD1Q8NA66 436 aa15.17■□□□□ 0.02
COL6A2-204ENST00000409416 HPS3Q969F9 1004 aa15.17■□□□□ 0.02
COL6A2-204ENST00000409416 FAM84BQ96KN1 310 aaPredicted RBP15.17■□□□□ 0.02
COL6A2-204ENST00000409416 BPIFA3Q9BQP9 254 aa15.17■□□□□ 0.02
COL6A2-204ENST00000409416 KRT2P35908 639 aa15.17■□□□□ 0.02
COL6A2-204ENST00000409416 TNNT3P45378 269 aaPredicted RBP15.17■□□□□ 0.02
COL6A2-204ENST00000409416 TOGARAM2Q6ZUX3 1019 aa15.17■□□□□ 0.02
COL6A2-204ENST00000409416 VSTM4Q8IW00 320 aa15.17■□□□□ 0.02
COL6A2-204ENST00000409416 MAP3K14Q99558 947 aa15.17■□□□□ 0.02
COL6A2-204ENST00000409416 FAM217BQ9NTX9 383 aaPredicted RBP15.17■□□□□ 0.02
COL6A2-204ENST00000409416 CAMTA2O94983 1202 aa15.17■□□□□ 0.02
COL6A2-204ENST00000409416 TFRCP02786 760 aaKnown RBP15.17■□□□□ 0.02
COL6A2-204ENST00000409416 SLC16A2P36021 539 aa15.17■□□□□ 0.02
COL6A2-204ENST00000409416 UBA7P41226 1012 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms