RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 PRPF40AO75400 957 aaKnown RBP11.97□□□□□ -0.49
SNORD88C-201ENST00000408061 TNNI2P48788 182 aa11.97□□□□□ -0.49
SNORD88C-201ENST00000408061 RESTQ13127 1097 aa11.97□□□□□ -0.49
SNORD88C-201ENST00000408061 SAFBQ15424 915 aaKnown RBP eCLIP11.97□□□□□ -0.49
SNORD88C-201ENST00000408061 SPDYE2Q495Y8 402 aa11.97□□□□□ -0.49
SNORD88C-201ENST00000408061 TATDN1Q6P1N9 297 aa11.97□□□□□ -0.49
SNORD88C-201ENST00000408061 CDC37L1Q7L3B6 337 aa11.97□□□□□ -0.49
SNORD88C-201ENST00000408061 NBPF11Q86T75 865 aa11.97□□□□□ -0.49
SNORD88C-201ENST00000408061 NUP133Q8WUM0 1156 aa11.97□□□□□ -0.49
SNORD88C-201ENST00000408061 ZBED3Q96IU2 234 aaPredicted RBP11.97□□□□□ -0.49
SNORD88C-201ENST00000408061 FAM198AQ9UFP1 575 aa11.97□□□□□ -0.49
SNORD88C-201ENST00000408061 DDX49Q9Y6V7 483 aaKnown RBP11.97□□□□□ -0.49
SNORD88C-201ENST00000408061 MYH6P13533 1939 aa11.97□□□□□ -0.49
SNORD88C-201ENST00000408061 DICER1Q9UPY3 1922 aaKnown RBP11.97□□□□□ -0.49
SNORD88C-201ENST00000408061 IGKV6D-41A0A0C4DH26 115 aa11.96□□□□□ -0.49
SNORD88C-201ENST00000408061 SMIM22K7EJ46 135 aa11.96□□□□□ -0.49
SNORD88C-201ENST00000408061 TTLL1O95922 423 aa11.96□□□□□ -0.49
SNORD88C-201ENST00000408061 UBE2HP62256 183 aa11.96□□□□□ -0.49
SNORD88C-201ENST00000408061 TNFAIP1Q13829 316 aa11.96□□□□□ -0.49
SNORD88C-201ENST00000408061 GRM4Q14833 912 aa11.96□□□□□ -0.49
SNORD88C-201ENST00000408061 TMTC3Q6ZXV5 915 aa11.96□□□□□ -0.49
SNORD88C-201ENST00000408061 MKL1Q969V6 931 aa11.96□□□□□ -0.49
SNORD88C-201ENST00000408061 SYAP1Q96A49 352 aaPredicted RBP11.96□□□□□ -0.49
SNORD88C-201ENST00000408061 TMEM47Q9BQJ4 181 aa11.96□□□□□ -0.49
SNORD88C-201ENST00000408061 SLC26A6Q9BXS9 759 aa11.96□□□□□ -0.49
SNORD88C-201ENST00000408061 TDRD3Q9H7E2 651 aaKnown RBP11.96□□□□□ -0.49
SNORD88C-201ENST00000408061 SH3GLB2Q9NR46 395 aa11.96□□□□□ -0.49
SNORD88C-201ENST00000408061 GINM1Q9NU53 330 aa11.96□□□□□ -0.49
SNORD88C-201ENST00000408061 MTMR4Q9NYA4 1195 aa11.96□□□□□ -0.49
SNORD88C-201ENST00000408061 ZNF70Q9UC06 446 aaPredicted RBP11.96□□□□□ -0.49
SNORD88C-201ENST00000408061 PALM3A6NDB9 673 aaPredicted RBP11.95□□□□□ -0.5
SNORD88C-201ENST00000408061 LMNB1P20700 586 aa11.95□□□□□ -0.5
SNORD88C-201ENST00000408061 U2AF2P26368 475 aaKnown RBP eCLIP11.95□□□□□ -0.5
SNORD88C-201ENST00000408061 SHMT1P34896 483 aa11.95□□□□□ -0.5
SNORD88C-201ENST00000408061 FUT2Q10981 343 aa11.95□□□□□ -0.5
SNORD88C-201ENST00000408061 NFIAQ12857 509 aa11.95□□□□□ -0.5
SNORD88C-201ENST00000408061 FOXD4L5Q5VV16 416 aaPredicted RBP11.95□□□□□ -0.5
SNORD88C-201ENST00000408061 USP48Q86UV5 1035 aa11.95□□□□□ -0.5
SNORD88C-201ENST00000408061 ZSCAN29Q8IWY8 852 aaPredicted RBP11.95□□□□□ -0.5
SNORD88C-201ENST00000408061 FOXD4L4Q8WXT5 416 aaPredicted RBP11.95□□□□□ -0.5
SNORD88C-201ENST00000408061 HOOK2Q96ED9 719 aa11.95□□□□□ -0.5
SNORD88C-201ENST00000408061 FOXP1Q9H334 677 aaPredicted RBP11.95□□□□□ -0.5
SNORD88C-201ENST00000408061 KANSL2Q9H9L4 492 aa11.95□□□□□ -0.5
SNORD88C-201ENST00000408061 NYAP2Q9P242 653 aa11.95□□□□□ -0.5
SNORD88C-201ENST00000408061 STX8Q9UNK0 236 aa11.95□□□□□ -0.5
SNORD88C-201ENST00000408061 COL4A5P29400 1685 aa11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 GREB1LQ9C091 1923 aaPredicted RBP11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 MYH15Q9Y2K3 1946 aa11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 hCG_1984214I3L0E3 225 aa11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 MAP3K10Q02779 954 aa11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 DNM1Q05193 864 aaKnown RBP11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 CERKLQ49MI3 558 aaPredicted RBP11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 ASPRV1Q53RT3 343 aa11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 KRT40Q6A162 431 aa11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 GALNT17Q6IS24 598 aa11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 TMEM179Q6ZVK1 233 aa11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 ZNF713Q8N859 430 aaPredicted RBP11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 SLC44A5Q8NCS7 719 aa11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 PHKBQ93100 1093 aa11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 CEP95Q96GE4 821 aa11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 MYL10Q9BUA6 226 aa11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 SPZ1Q9BXG8 430 aa11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 BRMS1Q9HCU9 246 aa11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 CABP5Q9NP86 173 aa11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 MYOZ2Q9NPC6 264 aa11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 RCOR1Q9UKL0 485 aa11.94□□□□□ -0.5
SNORD88C-201ENST00000408061 ADAMTSL1Q8N6G6 1762 aa11.93□□□□□ -0.5
SNORD88C-201ENST00000408061 DDTLA6NHG4 134 aaPredicted RBP11.93□□□□□ -0.5
SNORD88C-201ENST00000408061 H7C1D1 291 aa11.93□□□□□ -0.5
SNORD88C-201ENST00000408061 NMT2O60551 498 aa11.93□□□□□ -0.5
SNORD88C-201ENST00000408061 LETM1O95202 739 aaPredicted RBP11.93□□□□□ -0.5
SNORD88C-201ENST00000408061 MMP1P03956 469 aa11.93□□□□□ -0.5
SNORD88C-201ENST00000408061 PARP1P09874 1014 aaKnown RBP11.93□□□□□ -0.5
SNORD88C-201ENST00000408061 RXRAP19793 462 aa11.93□□□□□ -0.5
SNORD88C-201ENST00000408061 CALML3P27482 149 aa11.93□□□□□ -0.5
SNORD88C-201ENST00000408061 KIF23Q02241 960 aaPredicted RBP11.93□□□□□ -0.5
SNORD88C-201ENST00000408061 EVX2Q03828 476 aa11.93□□□□□ -0.5
SNORD88C-201ENST00000408061 GSE1Q14687 1217 aa11.93□□□□□ -0.5
SNORD88C-201ENST00000408061 GPATCH4Q5T3I0 446 aaKnown RBP11.93□□□□□ -0.5
SNORD88C-201ENST00000408061 FERMT3Q86UX7 667 aa11.93□□□□□ -0.5
SNORD88C-201ENST00000408061 CCDC144CPQ8IYA2 1237 aa11.93□□□□□ -0.5
SNORD88C-201ENST00000408061 SPATA32Q96LK8 384 aa11.93□□□□□ -0.5
SNORD88C-201ENST00000408061 ZBTB12Q9Y330 459 aaPredicted RBP11.93□□□□□ -0.5
SNORD88C-201ENST00000408061 GOLGA6L4A6NEF3 574 aa11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 WNT10BO00744 389 aa11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 YEATS4O95619 227 aa11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 SNHG28P0DPA3 235 aa11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 TCP10Q12799 353 aa11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 GNL2Q13823 731 aaKnown RBP11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 PFKFB3Q16875 520 aaPredicted RBP11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 RBM26Q5T8P6 1007 aaKnown RBP11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 RAB11FIP4Q86YS3 637 aa11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 TEX2Q8IWB9 1127 aa11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 GPC2Q8N158 579 aa11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 SRBD1Q8N5C6 995 aaKnown RBP11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 NLGN2Q8NFZ4 835 aa11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 CCDC12Q8WUD4 166 aaPredicted RBP11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 CSRNP1Q96S65 589 aa11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 POLR3EQ9NVU0 708 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms