RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 HSP90AA4PQ58FG1 418 aa12.22□□□□□ -0.45
CLIP4-204ENST00000404424 GPR161Q8N6U8 529 aaKnown RBP12.22□□□□□ -0.45
CLIP4-204ENST00000404424 CCDC87Q9NVE4 849 aa12.22□□□□□ -0.45
CLIP4-204ENST00000404424 ZNF804BA4D1E1 1349 aa12.22□□□□□ -0.45
CLIP4-204ENST00000404424 IGSF3O75054 1194 aa12.22□□□□□ -0.45
CLIP4-204ENST00000404424 PNMA6AP0CW24 399 aaPredicted RBP12.22□□□□□ -0.45
CLIP4-204ENST00000404424 FUT2Q10981 343 aa12.22□□□□□ -0.45
CLIP4-204ENST00000404424 PTPN21Q16825 1174 aa12.22□□□□□ -0.45
CLIP4-204ENST00000404424 IFIT1BQ5T764 474 aaKnown RBP12.22□□□□□ -0.45
CLIP4-204ENST00000404424 INTS5Q6P9B9 1019 aaKnown RBP12.22□□□□□ -0.45
CLIP4-204ENST00000404424 TOGARAM2Q6ZUX3 1019 aa12.22□□□□□ -0.45
CLIP4-204ENST00000404424 USP49Q70CQ1 688 aa12.22□□□□□ -0.45
CLIP4-204ENST00000404424 IQCA1Q86XH1 822 aa12.22□□□□□ -0.45
CLIP4-204ENST00000404424 DHX58Q96C10 678 aa12.22□□□□□ -0.45
CLIP4-204ENST00000404424 PAGE5Q96GU1 130 aa12.22□□□□□ -0.45
CLIP4-204ENST00000404424 PYM1Q9BRP8 204 aaKnown RBP12.22□□□□□ -0.45
CLIP4-204ENST00000404424 BRIP1Q9BX63 1249 aa12.22□□□□□ -0.45
CLIP4-204ENST00000404424 MRFAP1Q9Y605 127 aa12.22□□□□□ -0.45
CLIP4-204ENST00000404424 MYH6P13533 1939 aa12.22□□□□□ -0.45
CLIP4-204ENST00000404424 CAMTA2O94983 1202 aa12.21□□□□□ -0.45
CLIP4-204ENST00000404424 FGRP09769 529 aa12.21□□□□□ -0.45
CLIP4-204ENST00000404424 CCDC175P0C221 793 aa12.21□□□□□ -0.45
CLIP4-204ENST00000404424 CUL4BQ13620 913 aa12.21□□□□□ -0.45
CLIP4-204ENST00000404424 FILIP1LQ4L180 1135 aa12.21□□□□□ -0.45
CLIP4-204ENST00000404424 APTXQ7Z2E3 356 aaKnown RBP12.21□□□□□ -0.45
CLIP4-204ENST00000404424 ENAHQ8N8S7 591 aaPredicted RBP12.21□□□□□ -0.45
CLIP4-204ENST00000404424 SDR42E1Q8WUS8 393 aa12.21□□□□□ -0.45
CLIP4-204ENST00000404424 KIFC2Q96AC6 838 aa12.21□□□□□ -0.45
CLIP4-204ENST00000404424 RIOK1Q9BRS2 568 aaKnown RBP12.21□□□□□ -0.45
CLIP4-204ENST00000404424 VPS54Q9P1Q0 977 aa12.21□□□□□ -0.45
CLIP4-204ENST00000404424 BCL9LQ86UU0 1499 aa12.21□□□□□ -0.45
CLIP4-204ENST00000404424 SYNRGQ9UMZ2 1314 aa12.21□□□□□ -0.45
CLIP4-204ENST00000404424 DDAH1O94760 285 aa12.21□□□□□ -0.45
CLIP4-204ENST00000404424 NTSR2O95665 410 aa12.21□□□□□ -0.45
CLIP4-204ENST00000404424 DPYDQ12882 1025 aa12.21□□□□□ -0.45
CLIP4-204ENST00000404424 CDKAL1Q5VV42 579 aa12.21□□□□□ -0.45
CLIP4-204ENST00000404424 PPFIBP1Q86W92 1011 aa12.21□□□□□ -0.45
CLIP4-204ENST00000404424 FAM177A1Q8N128 213 aaPredicted RBP12.21□□□□□ -0.45
CLIP4-204ENST00000404424 WDR24Q96S15 920 aa12.21□□□□□ -0.45
CLIP4-204ENST00000404424 PBX1P40424 430 aa12.2□□□□□ -0.46
CLIP4-204ENST00000404424 PPP2R3AQ06190 1150 aa12.2□□□□□ -0.46
CLIP4-204ENST00000404424 UBE4AQ14139 1066 aa12.2□□□□□ -0.46
CLIP4-204ENST00000404424 ADGRA1Q86SQ6 560 aa12.2□□□□□ -0.46
CLIP4-204ENST00000404424 SYMPKQ92797 1274 aaKnown RBP12.2□□□□□ -0.46
CLIP4-204ENST00000404424 SHISA4Q96DD7 197 aa12.2□□□□□ -0.46
CLIP4-204ENST00000404424 CCDC51Q96ER9 411 aa12.2□□□□□ -0.46
CLIP4-204ENST00000404424 EPSTI1Q96J88 318 aa12.2□□□□□ -0.46
CLIP4-204ENST00000404424 ADD3Q9UEY8 706 aaKnown RBP12.2□□□□□ -0.46
CLIP4-204ENST00000404424 ABCF2Q9UG63 623 aa12.2□□□□□ -0.46
CLIP4-204ENST00000404424 COL14A1Q05707 1796 aaKnown RBP12.2□□□□□ -0.46
CLIP4-204ENST00000404424 ITIH6Q6UXX5 1313 aa12.2□□□□□ -0.46
CLIP4-204ENST00000404424 A0A087X0B3 334 aa12.2□□□□□ -0.46
CLIP4-204ENST00000404424 AFMP43652 599 aa12.2□□□□□ -0.46
CLIP4-204ENST00000404424 CRKLP46109 303 aaKnown RBP12.2□□□□□ -0.46
CLIP4-204ENST00000404424 TROAPQ12815 778 aa12.2□□□□□ -0.46
CLIP4-204ENST00000404424 TMED8Q6PL24 325 aaPredicted RBP12.2□□□□□ -0.46
CLIP4-204ENST00000404424 RSRC2Q7L4I2 434 aaKnown RBP12.2□□□□□ -0.46
CLIP4-204ENST00000404424 IGSF22Q8N9C0 903 aa12.2□□□□□ -0.46
CLIP4-204ENST00000404424 NIP7Q9Y221 180 aaKnown RBP eCLIP12.2□□□□□ -0.46
CLIP4-204ENST00000404424 V9GY48 417 aaPredicted RBP12.2□□□□□ -0.46
CLIP4-204ENST00000404424 COL22A1Q8NFW1 1626 aaPredicted RBP12.2□□□□□ -0.46
CLIP4-204ENST00000404424 DUOX1Q9NRD9 1551 aa12.2□□□□□ -0.46
CLIP4-204ENST00000404424 LAMB2P55268 1798 aa12.2□□□□□ -0.46
CLIP4-204ENST00000404424 KAT6BQ8WYB5 2073 aa12.2□□□□□ -0.46
CLIP4-204ENST00000404424 TRAPPC10P48553 1259 aa12.19□□□□□ -0.46
CLIP4-204ENST00000404424 ATP2C1P98194 919 aaPredicted RBP12.19□□□□□ -0.46
CLIP4-204ENST00000404424 TUBB2AQ13885 445 aa12.19□□□□□ -0.46
CLIP4-204ENST00000404424 EARS2Q5JPH6 523 aaKnown RBP12.19□□□□□ -0.46
CLIP4-204ENST00000404424 JAKMIP3Q5VZ66 844 aa12.19□□□□□ -0.46
CLIP4-204ENST00000404424 CNGA4Q8IV77 575 aa12.19□□□□□ -0.46
CLIP4-204ENST00000404424 RABGGTAQ92696 567 aa12.19□□□□□ -0.46
CLIP4-204ENST00000404424 TNFRSF25Q93038 417 aa12.19□□□□□ -0.46
CLIP4-204ENST00000404424 TUBB2BQ9BVA1 445 aa12.19□□□□□ -0.46
CLIP4-204ENST00000404424 PHLPP1O60346 1717 aa12.19□□□□□ -0.46
CLIP4-204ENST00000404424 PPP1R3GB7ZBB8 358 aa12.19□□□□□ -0.46
CLIP4-204ENST00000404424 TEX33O43247 280 aa12.19□□□□□ -0.46
CLIP4-204ENST00000404424 CD44P16070 742 aaKnown RBP12.19□□□□□ -0.46
CLIP4-204ENST00000404424 ATP6V1AP38606 617 aa12.19□□□□□ -0.46
CLIP4-204ENST00000404424 PLA2G4AP47712 749 aa12.19□□□□□ -0.46
CLIP4-204ENST00000404424 TUBB4BP68371 445 aa12.19□□□□□ -0.46
CLIP4-204ENST00000404424 CAVIN4Q5BKX8 364 aa12.19□□□□□ -0.46
CLIP4-204ENST00000404424 TTC38Q5R3I4 469 aa12.19□□□□□ -0.46
CLIP4-204ENST00000404424 TMTC3Q6ZXV5 915 aa12.19□□□□□ -0.46
CLIP4-204ENST00000404424 CDCA7Q9BWT1 371 aaPredicted RBP12.19□□□□□ -0.46
CLIP4-204ENST00000404424 CCDC66A2RUB6 948 aa12.18□□□□□ -0.46
CLIP4-204ENST00000404424 FAM205CA6NFA0 338 aa12.18□□□□□ -0.46
CLIP4-204ENST00000404424 PLEKHA8P1O95397 391 aa12.18□□□□□ -0.46
CLIP4-204ENST00000404424 RBL2Q08999 1139 aa12.18□□□□□ -0.46
CLIP4-204ENST00000404424 IQUBQ8NA54 791 aa12.18□□□□□ -0.46
CLIP4-204ENST00000404424 CCDC12Q8WUD4 166 aaPredicted RBP12.18□□□□□ -0.46
CLIP4-204ENST00000404424 GOLGA1Q92805 767 aa12.18□□□□□ -0.46
CLIP4-204ENST00000404424 ZNF652Q9Y2D9 606 aa12.18□□□□□ -0.46
CLIP4-204ENST00000404424 ADGRG1Q9Y653 693 aa12.18□□□□□ -0.46
CLIP4-204ENST00000404424 LRRC10BA6NIK2 292 aa12.18□□□□□ -0.46
CLIP4-204ENST00000404424 MFAP3LO75121 409 aa12.18□□□□□ -0.46
CLIP4-204ENST00000404424 FECHP22830 423 aa12.18□□□□□ -0.46
CLIP4-204ENST00000404424 SPAG1Q07617 926 aa12.18□□□□□ -0.46
CLIP4-204ENST00000404424 KLHL10Q6JEL2 608 aa12.18□□□□□ -0.46
CLIP4-204ENST00000404424 RASGRP2Q7LDG7 609 aa12.18□□□□□ -0.46
CLIP4-204ENST00000404424 ANKRD18AQ8IVF6 992 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms