RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 MYO1EQ12965 1108 aa11.07□□□□□ -0.64
PTPRM-203ENST00000400060 UBE4AQ14139 1066 aa11.07□□□□□ -0.64
PTPRM-203ENST00000400060 SPATA1Q5VX52 437 aa11.07□□□□□ -0.64
PTPRM-203ENST00000400060 DDX54Q8TDD1 881 aaKnown RBP11.07□□□□□ -0.64
PTPRM-203ENST00000400060 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.07□□□□□ -0.64
PTPRM-203ENST00000400060 LSG1Q9H089 658 aaKnown RBP11.07□□□□□ -0.64
PTPRM-203ENST00000400060 ALDH8A1Q9H2A2 487 aaPredicted RBP11.07□□□□□ -0.64
PTPRM-203ENST00000400060 HPCAL4Q9UM19 191 aa11.07□□□□□ -0.64
PTPRM-203ENST00000400060 TAF7Q15545 349 aaPredicted RBP11.07□□□□□ -0.64
PTPRM-203ENST00000400060 PRPF38AQ8NAV1 312 aaKnown RBP11.07□□□□□ -0.64
PTPRM-203ENST00000400060 ZNF473Q8WTR7 871 aaKnown RBP11.07□□□□□ -0.64
PTPRM-203ENST00000400060 CUL5Q93034 780 aa11.07□□□□□ -0.64
PTPRM-203ENST00000400060 POLR3EQ9NVU0 708 aa11.07□□□□□ -0.64
PTPRM-203ENST00000400060 MAST1Q9Y2H9 1570 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 NDC80O14777 642 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 GSTA2P09210 222 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 IQCB1Q15051 598 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 FBXO31Q5XUX0 539 aaPredicted RBP11.06□□□□□ -0.64
PTPRM-203ENST00000400060 RBM43Q6ZSC3 357 aaKnown RBP11.06□□□□□ -0.64
PTPRM-203ENST00000400060 ENOX1Q8TC92 643 aaKnown RBP11.06□□□□□ -0.64
PTPRM-203ENST00000400060 MPHOSPH6Q99547 160 aaKnown RBP11.06□□□□□ -0.64
PTPRM-203ENST00000400060 STK38LQ9Y2H1 464 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 SLC12A7Q9Y666 1083 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 EPN1Q9Y6I3 576 aaPredicted RBP11.06□□□□□ -0.64
PTPRM-203ENST00000400060 MAGI3Q5TCQ9 1506 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 RIMS2Q9UQ26 1411 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 ALDH1L1O75891 902 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 PFKFB1P16118 471 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 MARCKSP29966 332 aaPredicted RBP11.06□□□□□ -0.64
PTPRM-203ENST00000400060 SESN3P58005 492 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 CUL1Q13616 776 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 BEND6Q5SZJ8 279 aaPredicted RBP11.06□□□□□ -0.64
PTPRM-203ENST00000400060 DENND2CQ68D51 928 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 CCDC62Q6P9F0 684 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 CHAMP1Q96JM3 812 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 KAT14Q9H8E8 782 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 KIF9Q9HAQ2 790 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 ANKRD62A6NC57 917 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 ZNF213O14771 459 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 CASQ2O14958 399 aaPredicted RBP11.06□□□□□ -0.64
PTPRM-203ENST00000400060 PPP6R2O75170 966 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 CHGBP05060 677 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 RSRC2Q7L4I2 434 aaKnown RBP11.06□□□□□ -0.64
PTPRM-203ENST00000400060 C8orf58Q8NAV2 365 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 RETREG2Q8NC44 543 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 MCM8Q9UJA3 840 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 FAF1Q9UNN5 650 aaPredicted RBP11.06□□□□□ -0.64
PTPRM-203ENST00000400060 KLF18A0A0U1RQI7 1052 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 RGS16O15492 202 aaPredicted RBP11.06□□□□□ -0.64
PTPRM-203ENST00000400060 PPP1R37O75864 691 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 ARMCX5Q6P1M9 558 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 ZNF513Q8N8E2 541 aaPredicted RBP11.06□□□□□ -0.64
PTPRM-203ENST00000400060 FAM114A2Q9NRY5 505 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 ANGPTL2Q9UKU9 493 aa11.06□□□□□ -0.64
PTPRM-203ENST00000400060 BTBD11A6QL63 1104 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 ANKRD65E5RJM6 399 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 PECAM1P16284 738 aaPredicted RBP11.05□□□□□ -0.64
PTPRM-203ENST00000400060 YY1P25490 414 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 PAPOLAP51003 745 aaKnown RBP11.05□□□□□ -0.64
PTPRM-203ENST00000400060 ZNF131P52739 623 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 RESTQ13127 1097 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 LRIG3Q6UXM1 1119 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 MIER3Q7Z3K6 550 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 SYCE1Q8N0S2 351 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 STAMBPL1Q96FJ0 436 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 PHF23Q9BUL5 403 aaPredicted RBP11.05□□□□□ -0.64
PTPRM-203ENST00000400060 CARD14Q9BXL6 1004 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 ABCC10Q5T3U5 1492 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 GSTA1P08263 222 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 ZBTB16Q05516 673 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 PAK1Q13153 545 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 CCDC93Q567U6 631 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 ARHGAP22Q7Z5H3 698 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 PROSER2Q86WR7 435 aaPredicted RBP11.05□□□□□ -0.64
PTPRM-203ENST00000400060 ANKLE2Q86XL3 938 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 ZNF274Q96GC6 653 aaPredicted RBP11.05□□□□□ -0.64
PTPRM-203ENST00000400060 RGL1Q9NZL6 768 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 STOML1Q9UBI4 398 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 HDAC9Q9UKV0 1011 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 PPP1R9AQ9ULJ8 1098 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 PBRM1Q86U86 1689 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 A0A087WZG4 1122 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 MAP3K7O43318 606 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 GHRP10912 638 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 CNGA1P29973 690 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 PDCLQ13371 301 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 ARID5BQ14865 1188 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 FAM173BQ6P4H8 233 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 CYB5D1Q6P9G0 228 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 HELLSQ9NRZ9 838 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 EXOC1Q9NV70 894 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 BCAP29Q9UHQ4 241 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 LCMT1Q9UIC8 334 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 RAB21Q9UL25 225 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 PCDHA7Q9UN72 937 aa11.05□□□□□ -0.64
PTPRM-203ENST00000400060 NUTM2BA6NNL0 878 aaPredicted RBP11.04□□□□□ -0.64
PTPRM-203ENST00000400060 NUTM2EB1AL46 878 aaPredicted RBP11.04□□□□□ -0.64
PTPRM-203ENST00000400060 MAP2K7O14733 419 aa11.04□□□□□ -0.64
PTPRM-203ENST00000400060 ARHGEF2Q92974 986 aaKnown RBP11.04□□□□□ -0.64
PTPRM-203ENST00000400060 DDX21Q9NR30 783 aaKnown RBP eCLIP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms