RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 NCLP19338 710 aaKnown RBP7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 TFAP4Q01664 338 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 EVX2Q03828 476 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 PFKFB3Q16875 520 aaPredicted RBP7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 FOXP4Q8IVH2 680 aaPredicted RBP7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 LINC00301Q8NCQ3 95 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 KCNG4Q8TDN1 519 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 DDX11Q96FC9 970 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 LOC285556D6RIA3 1793 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 TOP1P11387 765 aaKnown RBP7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 RPS12P25398 132 aaKnown RBP7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 POLD1P28340 1107 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 SHMT1P34896 483 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 ZNF280AP59817 542 aaPredicted RBP7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 PTPAQ15257 358 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 NPY5RQ15761 445 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 AOC3Q16853 763 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 DOK7Q18PE1 504 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 ADALQ6DHV7 355 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 MICU3Q86XE3 530 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 MAPKAPK5Q8IW41 473 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 ENGASEQ8NFI3 743 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 PGBD1Q96JS3 809 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 DDX19AQ9NUU7 478 aaKnown RBP7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 USP40Q9NVE5 1235 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 FAM198AQ9UFP1 575 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 ZNRF3Q9ULT6 936 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 PARP14Q460N5 1801 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 TSPY2A6NKD2 308 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 KIF28PB7ZC32 967 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 POLR3DP05423 398 aaPredicted RBP7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 XRCC6P12956 609 aaKnown RBP eCLIP7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 SLC39A14Q15043 492 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 ZNF444Q8N0Y2 327 aaPredicted RBP7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 UPF1Q92900 1129 aaKnown RBP eCLIP7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 SHISA4Q96DD7 197 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 MTMR8Q96EF0 704 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 SPATA32Q96LK8 384 aa7.92□□□□□ -1.14
CX3CR1-202ENST00000399220 RBBP6Q7Z6E9 1792 aaKnown RBP7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 DOCK1Q14185 1865 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 ESYT2A0FGR8 921 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 TRAPPC10P48553 1259 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 FAM83AQ86UY5 434 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 SRBD1Q8N5C6 995 aaKnown RBP7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 ZNF579Q8NAF0 562 aaKnown RBP7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 PPP1R9BQ96SB3 815 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 TMEM47Q9BQJ4 181 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 RIOX1Q9H6W3 641 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 DBNDD1Q9H9R9 158 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 GINM1Q9NU53 330 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 MTMR4Q9NYA4 1195 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 SERPINB13Q9UIV8 391 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 GOLGA6L3A6NEY3 463 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 C21orf2O43822 256 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 TSPY3P0CV98 308 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 TSPY8P0CW00 308 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 ORC2Q13416 577 aaPredicted RBP7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 SPDYE2Q495Y8 402 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 RRP12Q5JTH9 1297 aaKnown RBP7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 NOSTRINQ8IVI9 506 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 PNMA1Q8ND90 353 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 CTCFLQ8NI51 663 aaPredicted RBP7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 PHIPQ8WWQ0 1821 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 DYNLL2Q96FJ2 89 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 TIGD1Q96MW7 591 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 USP28Q96RU2 1077 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 KAT14Q9H8E8 782 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 MKNK2Q9HBH9 465 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 NYAP2Q9P242 653 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 JAG2Q9Y219 1238 aa7.91□□□□□ -1.14
CX3CR1-202ENST00000399220 CNTNAP1P78357 1384 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 SPDYE2BA6NHP3 402 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 PPIP5K2O43314 1243 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 HLA-DOAP06340 250 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 SPDYE6P0CI01 402 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 XBP1P17861 261 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 DALRD3Q5D0E6 543 aaKnown RBP7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 RILPL1Q5EBL4 403 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 PPP1R18Q6NYC8 613 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 CHAMP1Q96JM3 812 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 ZKSCAN3Q9BRR0 538 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 SLC26A6Q9BXS9 759 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 KCNQ5Q9NR82 932 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 PI4KBQ9UBF8 816 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 HERC5Q9UII4 1024 aaKnown RBP7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 HPSEQ9Y251 543 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 CTAGE5O15320 804 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 BMP15O95972 392 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 SNW1Q13573 536 aaKnown RBP7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 TRIM29Q14134 588 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 UVSSAQ2YD98 709 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 ASPRV1Q53RT3 343 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 AXDND1Q5T1B0 1012 aaPredicted RBP7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 ANO1Q5XXA6 986 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 SH3BP5LQ7L8J4 393 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 GAS2L3Q86XJ1 694 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 GMCL1P1Q8NEA9 526 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 PHKBQ93100 1093 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 CLSTN2Q9H4D0 955 aa7.9□□□□□ -1.14
CX3CR1-202ENST00000399220 DNAJC18Q9H819 358 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms