RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 ABCB5Q2M3G0 1257 aa24.8■■□□□ 1.56
CPNE1-204ENST00000397443 SULF1Q8IWU6 871 aa24.8■■□□□ 1.56
CPNE1-204ENST00000397443 CCDC17Q96LX7 622 aa24.8■■□□□ 1.56
CPNE1-204ENST00000397443 KAT14Q9H8E8 782 aa24.8■■□□□ 1.56
CPNE1-204ENST00000397443 FZD1Q9UP38 647 aa24.8■■□□□ 1.56
CPNE1-204ENST00000397443 SCN4AP35499 1836 aa24.79■■□□□ 1.56
CPNE1-204ENST00000397443 GOLGA8AA7E2F4 631 aa24.79■■□□□ 1.56
CPNE1-204ENST00000397443 JAG1P78504 1218 aa24.79■■□□□ 1.56
CPNE1-204ENST00000397443 CATIPQ7Z7H3 387 aa24.79■■□□□ 1.56
CPNE1-204ENST00000397443 GH2P01242 217 aa24.78■■□□□ 1.56
CPNE1-204ENST00000397443 RAB3GAP1Q15042 981 aa24.78■■□□□ 1.56
CPNE1-204ENST00000397443 KRT26Q7Z3Y9 468 aa24.78■■□□□ 1.56
CPNE1-204ENST00000397443 DGKHQ86XP1 1220 aa24.78■■□□□ 1.56
CPNE1-204ENST00000397443 RRAGCQ9HB90 399 aa24.78■■□□□ 1.56
CPNE1-204ENST00000397443 SEPT2Q15019 361 aa24.78■■□□□ 1.56
CPNE1-204ENST00000397443 CCDC178Q5BJE1 867 aa24.78■■□□□ 1.56
CPNE1-204ENST00000397443 TMEM47Q9BQJ4 181 aa24.78■■□□□ 1.56
CPNE1-204ENST00000397443 MTMR4Q9NYA4 1195 aa24.78■■□□□ 1.56
CPNE1-204ENST00000397443 CLEC11AQ9Y240 323 aa24.78■■□□□ 1.56
CPNE1-204ENST00000397443 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-204ENST00000397443 PLIN4Q96Q06 1357 aa24.78■■□□□ 1.56
CPNE1-204ENST00000397443 PITPNM2Q9BZ72 1349 aa24.77■■□□□ 1.56
CPNE1-204ENST00000397443 TBC1D12O60347 775 aa24.77■■□□□ 1.56
CPNE1-204ENST00000397443 INTS4Q96HW7 963 aaKnown RBP24.77■■□□□ 1.56
CPNE1-204ENST00000397443 WDR90Q96KV7 1748 aa24.77■■□□□ 1.56
CPNE1-204ENST00000397443 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.77■■□□□ 1.56
CPNE1-204ENST00000397443 SMC3Q9UQE7 1217 aa24.77■■□□□ 1.56
CPNE1-204ENST00000397443 JAK2O60674 1132 aa24.76■■□□□ 1.55
CPNE1-204ENST00000397443 POTEIP0CG38 1075 aa24.76■■□□□ 1.55
CPNE1-204ENST00000397443 POTEJP0CG39 1038 aa24.76■■□□□ 1.55
CPNE1-204ENST00000397443 CDC27P30260 824 aa24.76■■□□□ 1.55
CPNE1-204ENST00000397443 ADD1P35611 737 aaKnown RBP24.76■■□□□ 1.55
CPNE1-204ENST00000397443 PRKG1Q13976 671 aa24.76■■□□□ 1.55
CPNE1-204ENST00000397443 PNMA1Q8ND90 353 aa24.76■■□□□ 1.55
CPNE1-204ENST00000397443 CABP5Q9NP86 173 aa24.76■■□□□ 1.55
CPNE1-204ENST00000397443 CLIP2Q9UDT6 1046 aa24.76■■□□□ 1.55
CPNE1-204ENST00000397443 LRRC47Q8N1G4 583 aaKnown RBP24.76■■□□□ 1.55
CPNE1-204ENST00000397443 IGKV6D-41A0A0C4DH26 115 aa24.75■■□□□ 1.55
CPNE1-204ENST00000397443 CPLX1O14810 134 aa24.75■■□□□ 1.55
CPNE1-204ENST00000397443 TMEM179Q6ZVK1 233 aa24.75■■□□□ 1.55
CPNE1-204ENST00000397443 USP48Q86UV5 1035 aa24.75■■□□□ 1.55
CPNE1-204ENST00000397443 DDX11Q96FC9 970 aa24.75■■□□□ 1.55
CPNE1-204ENST00000397443 TAOK2Q9UL54 1235 aa24.75■■□□□ 1.55
CPNE1-204ENST00000397443 PPP2R3BQ9Y5P8 575 aa24.75■■□□□ 1.55
CPNE1-204ENST00000397443 TTLL1O95922 423 aa24.74■■□□□ 1.55
CPNE1-204ENST00000397443 GJB2P29033 226 aa24.74■■□□□ 1.55
CPNE1-204ENST00000397443 PNMA8AQ86V59 439 aaPredicted RBP24.74■■□□□ 1.55
CPNE1-204ENST00000397443 CTDNEP1O95476 244 aa24.74■■□□□ 1.55
CPNE1-204ENST00000397443 GUCY1A2P33402 732 aa24.74■■□□□ 1.55
CPNE1-204ENST00000397443 TROAPQ12815 778 aa24.74■■□□□ 1.55
CPNE1-204ENST00000397443 RTN1Q16799 776 aa24.74■■□□□ 1.55
CPNE1-204ENST00000397443 RASGRP2Q7LDG7 609 aa24.74■■□□□ 1.55
CPNE1-204ENST00000397443 CMTR1Q8N1G2 835 aaKnown RBP24.74■■□□□ 1.55
CPNE1-204ENST00000397443 CCDC82Q8N4S0 544 aa24.74■■□□□ 1.55
CPNE1-204ENST00000397443 ANKS1AQ92625 1134 aa24.74■■□□□ 1.55
CPNE1-204ENST00000397443 RAD21O60216 631 aa24.73■■□□□ 1.55
CPNE1-204ENST00000397443 TOP1P11387 765 aaKnown RBP24.73■■□□□ 1.55
CPNE1-204ENST00000397443 MAP3K10Q02779 954 aa24.73■■□□□ 1.55
CPNE1-204ENST00000397443 ICA1Q05084 483 aa24.73■■□□□ 1.55
CPNE1-204ENST00000397443 DCAF15Q66K64 600 aa24.73■■□□□ 1.55
CPNE1-204ENST00000397443 FANCBQ8NB91 859 aa24.73■■□□□ 1.55
CPNE1-204ENST00000397443 ZC3H15Q8WU90 426 aaKnown RBP24.73■■□□□ 1.55
CPNE1-204ENST00000397443 GLIS2Q9BZE0 524 aaPredicted RBP24.73■■□□□ 1.55
CPNE1-204ENST00000397443 GREB1LQ9C091 1923 aaPredicted RBP24.73■■□□□ 1.55
CPNE1-204ENST00000397443 EEF2P13639 858 aaKnown RBP24.73■■□□□ 1.55
CPNE1-204ENST00000397443 CAP2P40123 477 aa24.73■■□□□ 1.55
CPNE1-204ENST00000397443 NSUN7Q8NE18 718 aaKnown RBP24.73■■□□□ 1.55
CPNE1-204ENST00000397443 KANSL2Q9H9L4 492 aa24.73■■□□□ 1.55
CPNE1-204ENST00000397443 NMRK2Q9NPI5 230 aa24.73■■□□□ 1.55
CPNE1-204ENST00000397443 FAM217BQ9NTX9 383 aaPredicted RBP24.73■■□□□ 1.55
CPNE1-204ENST00000397443 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.73■■□□□ 1.55
CPNE1-204ENST00000397443 ZBTB21Q9ULJ3 1066 aa24.73■■□□□ 1.55
CPNE1-204ENST00000397443 PTPDC1A2A3K4 754 aa24.72■■□□□ 1.55
CPNE1-204ENST00000397443 PHF20L1A8MW92 1017 aa24.72■■□□□ 1.55
CPNE1-204ENST00000397443 DHX16O60231 1041 aaKnown RBP24.72■■□□□ 1.55
CPNE1-204ENST00000397443 DDAH1O94760 285 aa24.72■■□□□ 1.55
CPNE1-204ENST00000397443 VEGFAP15692 232 aaPredicted RBP24.72■■□□□ 1.55
CPNE1-204ENST00000397443 CCDC84Q86UT8 332 aaPredicted RBP24.72■■□□□ 1.55
CPNE1-204ENST00000397443 SUPT20HL1Q3ZLR7 823 aa24.71■■□□□ 1.55
CPNE1-204ENST00000397443 SSC5DA1L4H1 1573 aa24.71■■□□□ 1.55
CPNE1-204ENST00000397443 MYH4Q9Y623 1939 aa24.71■■□□□ 1.55
CPNE1-204ENST00000397443 INPP5BP32019 993 aa24.71■■□□□ 1.55
CPNE1-204ENST00000397443 CTCFLQ8NI51 663 aaPredicted RBP24.71■■□□□ 1.55
CPNE1-204ENST00000397443 PHKBQ93100 1093 aa24.71■■□□□ 1.55
CPNE1-204ENST00000397443 HOOK2Q96ED9 719 aa24.71■■□□□ 1.55
CPNE1-204ENST00000397443 WRNIP1Q96S55 665 aa24.71■■□□□ 1.55
CPNE1-204ENST00000397443 ZNF341Q9BYN7 854 aa24.71■■□□□ 1.55
CPNE1-204ENST00000397443 CWC22Q9HCG8 908 aaKnown RBP24.71■■□□□ 1.55
CPNE1-204ENST00000397443 CALM1P0DP23 149 aa24.7■■□□□ 1.54
CPNE1-204ENST00000397443 CALM2P0DP24 149 aa24.7■■□□□ 1.54
CPNE1-204ENST00000397443 CALM3P0DP25 149 aa24.7■■□□□ 1.54
CPNE1-204ENST00000397443 MAP1SQ66K74 1059 aaPredicted RBP24.7■■□□□ 1.54
CPNE1-204ENST00000397443 NOVP48745 357 aa24.69■■□□□ 1.54
CPNE1-204ENST00000397443 FOSBP53539 338 aa24.69■■□□□ 1.54
CPNE1-204ENST00000397443 PLEKHA8P1O95397 391 aa24.69■■□□□ 1.54
CPNE1-204ENST00000397443 GOLGA8HP0CJ92 632 aa24.69■■□□□ 1.54
CPNE1-204ENST00000397443 DDIT3P35638 169 aa24.69■■□□□ 1.54
CPNE1-204ENST00000397443 SIAH1Q8IUQ4 282 aa24.69■■□□□ 1.54
CPNE1-204ENST00000397443 ZKSCAN4Q969J2 545 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-204ENST00000397443 LLPHQ9BRT6 129 aaKnown RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms