RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 HOMER1Q86YM7 354 aa6.43□□□□□ -1.38
GABPB1-204ENST00000396464 SEC16BQ96JE7 1060 aa6.43□□□□□ -1.38
GABPB1-204ENST00000396464 TCF12Q99081 682 aa6.43□□□□□ -1.38
GABPB1-204ENST00000396464 APBA2Q99767 749 aa6.43□□□□□ -1.38
GABPB1-204ENST00000396464 NRSN2Q9GZP1 204 aa6.43□□□□□ -1.38
GABPB1-204ENST00000396464 LGR6Q9HBX8 967 aa6.43□□□□□ -1.38
GABPB1-204ENST00000396464 FAM105AQ9NUU6 356 aa6.43□□□□□ -1.38
GABPB1-204ENST00000396464 MRVI1Q9Y6F6 885 aa6.43□□□□□ -1.38
GABPB1-204ENST00000396464 JUNBP17275 347 aaPredicted RBP6.42□□□□□ -1.38
GABPB1-204ENST00000396464 NASPP49321 788 aaPredicted RBP6.42□□□□□ -1.38
GABPB1-204ENST00000396464 AP3B2Q13367 1082 aa6.42□□□□□ -1.38
GABPB1-204ENST00000396464 FZD5Q13467 585 aa6.42□□□□□ -1.38
GABPB1-204ENST00000396464 CYP27C1Q4G0S4 372 aa6.42□□□□□ -1.38
GABPB1-204ENST00000396464 BRDTQ58F21 947 aaPredicted RBP6.42□□□□□ -1.38
GABPB1-204ENST00000396464 MEI1Q5TIA1 1274 aa6.42□□□□□ -1.38
GABPB1-204ENST00000396464 LILRB2Q8N423 598 aa6.42□□□□□ -1.38
GABPB1-204ENST00000396464 ZNF512BQ96KM6 892 aaPredicted RBP6.42□□□□□ -1.38
GABPB1-204ENST00000396464 PIDD1Q9HB75 910 aa6.42□□□□□ -1.38
GABPB1-204ENST00000396464 ZC3H7BQ9UGR2 993 aaKnown RBP6.42□□□□□ -1.38
GABPB1-204ENST00000396464 FBXO9Q9UK97 447 aaPredicted RBP6.42□□□□□ -1.38
GABPB1-204ENST00000396464 SPG7Q9UQ90 795 aa6.42□□□□□ -1.38
GABPB1-204ENST00000396464 SLC5A6Q9Y289 635 aa6.42□□□□□ -1.38
GABPB1-204ENST00000396464 AOC2O75106 756 aa6.42□□□□□ -1.38
GABPB1-204ENST00000396464 B3GALT4O96024 378 aa6.42□□□□□ -1.38
GABPB1-204ENST00000396464 PDE6BP35913 854 aa6.42□□□□□ -1.38
GABPB1-204ENST00000396464 SYCP2LQ5T4T6 812 aa6.42□□□□□ -1.38
GABPB1-204ENST00000396464 ERMP1Q7Z2K6 904 aa6.42□□□□□ -1.38
GABPB1-204ENST00000396464 LRP10Q7Z4F1 713 aa6.42□□□□□ -1.38
GABPB1-204ENST00000396464 JAMLQ86YT9 394 aa6.42□□□□□ -1.38
GABPB1-204ENST00000396464 FEZ1Q99689 392 aa6.42□□□□□ -1.38
GABPB1-204ENST00000396464 PCGF6Q9BYE7 350 aa6.42□□□□□ -1.38
GABPB1-204ENST00000396464 ACSS3Q9H6R3 686 aa6.42□□□□□ -1.38
GABPB1-204ENST00000396464 COPRSQ9NQ92 184 aa6.42□□□□□ -1.38
GABPB1-204ENST00000396464 USP31Q70CQ4 1352 aa6.41□□□□□ -1.38
GABPB1-204ENST00000396464 CPNE3O75131 537 aaKnown RBP6.41□□□□□ -1.38
GABPB1-204ENST00000396464 CAND2O75155 1236 aa6.41□□□□□ -1.38
GABPB1-204ENST00000396464 GADD45BO75293 160 aaPredicted RBP6.41□□□□□ -1.38
GABPB1-204ENST00000396464 CTSBP07858 339 aa6.41□□□□□ -1.38
GABPB1-204ENST00000396464 LMOD3Q0VAK6 560 aa6.41□□□□□ -1.38
GABPB1-204ENST00000396464 HDAC1Q13547 482 aaPredicted RBP6.41□□□□□ -1.38
GABPB1-204ENST00000396464 PLCL1Q15111 1095 aa6.41□□□□□ -1.38
GABPB1-204ENST00000396464 TKFCQ3LXA3 575 aa6.41□□□□□ -1.38
GABPB1-204ENST00000396464 KIAA0319Q5VV43 1072 aa6.41□□□□□ -1.38
GABPB1-204ENST00000396464 USPL1Q5W0Q7 1092 aa6.41□□□□□ -1.38
GABPB1-204ENST00000396464 OGFOD2Q6N063 350 aa6.41□□□□□ -1.38
GABPB1-204ENST00000396464 AMOTL1Q8IY63 956 aa6.41□□□□□ -1.38
GABPB1-204ENST00000396464 STK11IPQ8N1F8 1099 aa6.41□□□□□ -1.38
GABPB1-204ENST00000396464 GATA6Q92908 595 aa6.41□□□□□ -1.38
GABPB1-204ENST00000396464 CSRNP1Q96S65 589 aa6.41□□□□□ -1.38
GABPB1-204ENST00000396464 DNAJC7Q99615 494 aa6.41□□□□□ -1.38
GABPB1-204ENST00000396464 ZNF576Q9H609 170 aa6.41□□□□□ -1.38
GABPB1-204ENST00000396464 PAK6Q9NQU5 681 aaPredicted RBP6.41□□□□□ -1.38
GABPB1-204ENST00000396464 CHST12Q9NRB3 414 aa6.41□□□□□ -1.38
GABPB1-204ENST00000396464 TMEM260Q9NX78 707 aa6.41□□□□□ -1.38
GABPB1-204ENST00000396464 IFRD1O00458 451 aaPredicted RBP6.4□□□□□ -1.39
GABPB1-204ENST00000396464 EXOC5O00471 708 aa6.4□□□□□ -1.39
GABPB1-204ENST00000396464 BIN1O00499 593 aa6.4□□□□□ -1.39
GABPB1-204ENST00000396464 TSPAN6O43657 245 aa6.4□□□□□ -1.39
GABPB1-204ENST00000396464 SLFN14P0C7P3 912 aa6.4□□□□□ -1.39
GABPB1-204ENST00000396464 ZEB1P37275 1124 aaPredicted RBP6.4□□□□□ -1.39
GABPB1-204ENST00000396464 NFE2Q16621 373 aaPredicted RBP6.4□□□□□ -1.39
GABPB1-204ENST00000396464 OGFOD3Q6PK18 319 aa6.4□□□□□ -1.39
GABPB1-204ENST00000396464 ARHGAP27Q6ZUM4 889 aa6.4□□□□□ -1.39
GABPB1-204ENST00000396464 C16orf86Q6ZW13 317 aa6.4□□□□□ -1.39
GABPB1-204ENST00000396464 CBLL1Q75N03 491 aa6.4□□□□□ -1.39
GABPB1-204ENST00000396464 SAMD3Q8N6K7 520 aa6.4□□□□□ -1.39
GABPB1-204ENST00000396464 TRIM56Q9BRZ2 755 aaKnown RBP6.4□□□□□ -1.39
GABPB1-204ENST00000396464 FAM126AQ9BYI3 521 aaPredicted RBP6.4□□□□□ -1.39
GABPB1-204ENST00000396464 NPHS2Q9NP85 383 aa6.4□□□□□ -1.39
GABPB1-204ENST00000396464 SWAP70Q9UH65 585 aa6.4□□□□□ -1.39
GABPB1-204ENST00000396464 CCER2I3L3R5 266 aa6.39□□□□□ -1.39
GABPB1-204ENST00000396464 ECEL1O95672 775 aa6.39□□□□□ -1.39
GABPB1-204ENST00000396464 KRT18P05783 430 aaKnown RBP6.39□□□□□ -1.39
GABPB1-204ENST00000396464 ORC1Q13415 861 aa6.39□□□□□ -1.39
GABPB1-204ENST00000396464 SQSTM1Q13501 440 aa6.39□□□□□ -1.39
GABPB1-204ENST00000396464 BRD3Q15059 726 aa6.39□□□□□ -1.39
GABPB1-204ENST00000396464 WDR78Q5VTH9 848 aa6.39□□□□□ -1.39
GABPB1-204ENST00000396464 FAM43BQ6ZT52 329 aaPredicted RBP6.39□□□□□ -1.39
GABPB1-204ENST00000396464 KRT26Q7Z3Y9 468 aa6.39□□□□□ -1.39
GABPB1-204ENST00000396464 CNPY4Q8N129 248 aa6.39□□□□□ -1.39
GABPB1-204ENST00000396464 NAP1L4Q99733 375 aaKnown RBP6.39□□□□□ -1.39
GABPB1-204ENST00000396464 ARPC5LQ9BPX5 153 aa6.39□□□□□ -1.39
GABPB1-204ENST00000396464 TMX4Q9H1E5 349 aaPredicted RBP6.39□□□□□ -1.39
GABPB1-204ENST00000396464 ARNT2Q9HBZ2 717 aa6.39□□□□□ -1.39
GABPB1-204ENST00000396464 ITPKAP23677 461 aa6.38□□□□□ -1.39
GABPB1-204ENST00000396464 TAF1CQ15572 869 aaPredicted RBP6.38□□□□□ -1.39
GABPB1-204ENST00000396464 VPS72Q15906 364 aa6.38□□□□□ -1.39
GABPB1-204ENST00000396464 MISP3Q96FF7 219 aa6.38□□□□□ -1.39
GABPB1-204ENST00000396464 SPON2Q9BUD6 331 aa6.38□□□□□ -1.39
GABPB1-204ENST00000396464 WDR18Q9BV38 432 aa6.38□□□□□ -1.39
GABPB1-204ENST00000396464 ATXN3LQ9H3M9 355 aa6.38□□□□□ -1.39
GABPB1-204ENST00000396464 C1GALT1Q9NS00 363 aa6.38□□□□□ -1.39
GABPB1-204ENST00000396464 PPP4R2Q9NY27 417 aa6.38□□□□□ -1.39
GABPB1-204ENST00000396464 TRAK1Q9UPV9 953 aa6.38□□□□□ -1.39
GABPB1-204ENST00000396464 EFR3BQ9Y2G0 817 aa6.38□□□□□ -1.39
GABPB1-204ENST00000396464 ATP8A1Q9Y2Q0 1164 aa6.38□□□□□ -1.39
GABPB1-204ENST00000396464 MSRB2Q9Y3D2 182 aa6.38□□□□□ -1.39
GABPB1-204ENST00000396464 EIF1AYO14602 144 aaKnown RBP6.37□□□□□ -1.39
GABPB1-204ENST00000396464 DYNC1LI2O43237 492 aaPredicted RBP6.37□□□□□ -1.39
GABPB1-204ENST00000396464 ALDH1L1O75891 902 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms