RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 BMP15O95972 392 aa19.26■□□□□ 0.67
NUP50-202ENST00000396096 RCSD1Q6JBY9 416 aa19.26■□□□□ 0.67
NUP50-202ENST00000396096 CERS3Q8IU89 383 aa19.26■□□□□ 0.67
NUP50-202ENST00000396096 OSBPL5Q9H0X9 879 aaPredicted RBP19.26■□□□□ 0.67
NUP50-202ENST00000396096 MCM9Q9NXL9 1143 aa19.26■□□□□ 0.67
NUP50-202ENST00000396096 TRPC5Q9UL62 973 aaPredicted RBP19.26■□□□□ 0.67
NUP50-202ENST00000396096 CDK5RAP2Q96SN8 1893 aa19.26■□□□□ 0.67
NUP50-202ENST00000396096 TRIM75PA6NK02 468 aa19.26■□□□□ 0.67
NUP50-202ENST00000396096 MYO1BO43795 1136 aa19.26■□□□□ 0.67
NUP50-202ENST00000396096 LDHCP07864 332 aa19.26■□□□□ 0.67
NUP50-202ENST00000396096 GYS1P13807 737 aa19.26■□□□□ 0.67
NUP50-202ENST00000396096 GRIN1Q05586 938 aa19.26■□□□□ 0.67
NUP50-202ENST00000396096 NPY5RQ15761 445 aa19.26■□□□□ 0.67
NUP50-202ENST00000396096 FAM47AQ5JRC9 791 aa19.26■□□□□ 0.67
NUP50-202ENST00000396096 NT5DC1Q5TFE4 455 aa19.26■□□□□ 0.67
NUP50-202ENST00000396096 DGKHQ86XP1 1220 aa19.26■□□□□ 0.67
NUP50-202ENST00000396096 SRBD1Q8N5C6 995 aaKnown RBP19.26■□□□□ 0.67
NUP50-202ENST00000396096 RPGRQ92834 1020 aaKnown RBP19.26■□□□□ 0.67
NUP50-202ENST00000396096 BRMS1Q9HCU9 246 aa19.26■□□□□ 0.67
NUP50-202ENST00000396096 JAG2Q9Y219 1238 aa19.26■□□□□ 0.67
NUP50-202ENST00000396096 TSPY2A6NKD2 308 aa19.25■□□□□ 0.67
NUP50-202ENST00000396096 NMT2O60551 498 aa19.25■□□□□ 0.67
NUP50-202ENST00000396096 BAG3O95817 575 aa19.25■□□□□ 0.67
NUP50-202ENST00000396096 USP17L8P0C7I0 530 aa19.25■□□□□ 0.67
NUP50-202ENST00000396096 ATP2B4P23634 1241 aa19.25■□□□□ 0.67
NUP50-202ENST00000396096 GSDMDP57764 484 aa19.25■□□□□ 0.67
NUP50-202ENST00000396096 GPSM2P81274 684 aa19.25■□□□□ 0.67
NUP50-202ENST00000396096 CCDC178Q5BJE1 867 aa19.25■□□□□ 0.67
NUP50-202ENST00000396096 SLC27A3Q5K4L6 730 aa19.25■□□□□ 0.67
NUP50-202ENST00000396096 FOXP4Q8IVH2 680 aaPredicted RBP19.25■□□□□ 0.67
NUP50-202ENST00000396096 LRRC37AA6NMS7 1700 aa19.25■□□□□ 0.67
NUP50-202ENST00000396096 DDX60LQ5H9U9 1706 aaKnown RBP19.24■□□□□ 0.67
NUP50-202ENST00000396096 ST5P78524 1137 aa19.24■□□□□ 0.67
NUP50-202ENST00000396096 KANK3Q6NY19 840 aa19.24■□□□□ 0.67
NUP50-202ENST00000396096 SLC51AQ86UW1 340 aa19.24■□□□□ 0.67
NUP50-202ENST00000396096 SH3RF3Q8TEJ3 882 aaPredicted RBP19.24■□□□□ 0.67
NUP50-202ENST00000396096 HSD3B7Q9H2F3 369 aa19.24■□□□□ 0.67
NUP50-202ENST00000396096 PCDHA5Q9Y5H7 936 aa19.24■□□□□ 0.67
NUP50-202ENST00000396096 IL1R1P14778 569 aa19.24■□□□□ 0.67
NUP50-202ENST00000396096 KIF5BP33176 963 aa19.24■□□□□ 0.67
NUP50-202ENST00000396096 GTF2F1P35269 517 aaKnown RBP eCLIP19.24■□□□□ 0.672e-6■■■■□ 26
NUP50-202ENST00000396096 USP5P45974 858 aa19.24■□□□□ 0.67
NUP50-202ENST00000396096 MYL5Q02045 173 aa19.24■□□□□ 0.67
NUP50-202ENST00000396096 DHX8Q14562 1220 aaKnown RBP19.24■□□□□ 0.67
NUP50-202ENST00000396096 RBM17Q96I25 401 aaKnown RBP19.24■□□□□ 0.67
NUP50-202ENST00000396096 TCP11L1Q9NUJ3 509 aa19.24■□□□□ 0.67
NUP50-202ENST00000396096 FAM205CA6NFA0 338 aa19.23■□□□□ 0.67
NUP50-202ENST00000396096 SERPINB2P05120 415 aa19.23■□□□□ 0.67
NUP50-202ENST00000396096 SCG2P13521 617 aa19.23■□□□□ 0.67
NUP50-202ENST00000396096 SARSP49591 514 aaKnown RBP19.23■□□□□ 0.67
NUP50-202ENST00000396096 POSTNQ15063 836 aa19.23■□□□□ 0.67
NUP50-202ENST00000396096 PFKFB3Q16875 520 aaPredicted RBP19.23■□□□□ 0.67
NUP50-202ENST00000396096 EARS2Q5JPH6 523 aaKnown RBP19.23■□□□□ 0.67
NUP50-202ENST00000396096 SPECC1Q5M775 1068 aa19.23■□□□□ 0.67
NUP50-202ENST00000396096 OLFM4Q6UX06 510 aa19.23■□□□□ 0.67
NUP50-202ENST00000396096 FERMT2Q96AC1 680 aa19.23■□□□□ 0.67
NUP50-202ENST00000396096 XPO4Q9C0E2 1151 aaKnown RBP19.23■□□□□ 0.67
NUP50-202ENST00000396096 LTBP1Q14766 1721 aa19.23■□□□□ 0.67
NUP50-202ENST00000396096 hCG_1642624A0A1W2PR95 340 aa19.22■□□□□ 0.67
NUP50-202ENST00000396096 ACTN4O43707 911 aaKnown RBP19.22■□□□□ 0.67
NUP50-202ENST00000396096 HOXA10P31260 410 aaPredicted RBP19.22■□□□□ 0.67
NUP50-202ENST00000396096 GRIK5Q16478 980 aa19.22■□□□□ 0.67
NUP50-202ENST00000396096 CSRNP2Q9H175 543 aa19.22■□□□□ 0.67
NUP50-202ENST00000396096 CD209Q9NNX6 404 aa19.22■□□□□ 0.67
NUP50-202ENST00000396096 IL17RBQ9NRM6 502 aa19.22■□□□□ 0.67
NUP50-202ENST00000396096 PODXL2Q9NZ53 605 aa19.22■□□□□ 0.67
NUP50-202ENST00000396096 IFNKQ9P0W0 207 aa19.22■□□□□ 0.67
NUP50-202ENST00000396096 POLR2DO15514 142 aaKnown RBP19.22■□□□□ 0.67
NUP50-202ENST00000396096 BBOX1O75936 387 aa19.22■□□□□ 0.67
NUP50-202ENST00000396096 TRAPPC10P48553 1259 aa19.22■□□□□ 0.67
NUP50-202ENST00000396096 TFAP4Q01664 338 aa19.22■□□□□ 0.67
NUP50-202ENST00000396096 AMOTL1Q8IY63 956 aa19.22■□□□□ 0.67
NUP50-202ENST00000396096 TRIML1Q8N9V2 468 aa19.22■□□□□ 0.67
NUP50-202ENST00000396096 RTFDC1Q9BY42 306 aaPredicted RBP19.22■□□□□ 0.67
NUP50-202ENST00000396096 KAT14Q9H8E8 782 aa19.22■□□□□ 0.67
NUP50-202ENST00000396096 KCND1Q9NSA2 647 aa19.22■□□□□ 0.67
NUP50-202ENST00000396096 SERTAD1Q9UHV2 236 aa19.22■□□□□ 0.67
NUP50-202ENST00000396096 CCZ1BP86790 482 aa19.21■□□□□ 0.67
NUP50-202ENST00000396096 CCZ1P86791 482 aaPredicted RBP19.21■□□□□ 0.67
NUP50-202ENST00000396096 FANCCQ00597 558 aa19.21■□□□□ 0.67
NUP50-202ENST00000396096 DIXDC1Q155Q3 683 aa19.21■□□□□ 0.67
NUP50-202ENST00000396096 ISM2Q6H9L7 571 aa19.21■□□□□ 0.67
NUP50-202ENST00000396096 SPATA20Q8TB22 786 aa19.21■□□□□ 0.67
NUP50-202ENST00000396096 SH3GLB2Q9NR46 395 aa19.21■□□□□ 0.67
NUP50-202ENST00000396096 GGA1Q9UJY5 639 aa19.21■□□□□ 0.67
NUP50-202ENST00000396096 MAN1B1Q9UKM7 699 aa19.21■□□□□ 0.67
NUP50-202ENST00000396096 KLRG2A4D1S0 409 aaPredicted RBP19.2■□□□□ 0.66
NUP50-202ENST00000396096 FOXN1O15353 648 aa19.2■□□□□ 0.66
NUP50-202ENST00000396096 UFL1O94874 794 aa19.2■□□□□ 0.66
NUP50-202ENST00000396096 BMP6P22004 513 aa19.2■□□□□ 0.66
NUP50-202ENST00000396096 GRM4Q14833 912 aa19.2■□□□□ 0.66
NUP50-202ENST00000396096 ARID5BQ14865 1188 aa19.2■□□□□ 0.66
NUP50-202ENST00000396096 FILIP1Q7Z7B0 1213 aa19.2■□□□□ 0.66
NUP50-202ENST00000396096 CRAMP1Q96RY5 1269 aa19.2■□□□□ 0.66
NUP50-202ENST00000396096 GPR75-ASB3A0A0A6YYF3 556 aa19.2■□□□□ 0.66
NUP50-202ENST00000396096 SMC2O95347 1197 aa19.2■□□□□ 0.66
NUP50-202ENST00000396096 ATP2B1P20020 1258 aa19.2■□□□□ 0.66
NUP50-202ENST00000396096 MORC3Q14149 939 aa19.2■□□□□ 0.66
NUP50-202ENST00000396096 TTC38Q5R3I4 469 aa19.2■□□□□ 0.66
NUP50-202ENST00000396096 CCDC150Q8NCX0 1101 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms