RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 GIMAP6Q6P9H5 292 aa20.95■□□□□ 0.94
UPK3A-202ENST00000396082 TMEM179Q6ZVK1 233 aa20.95■□□□□ 0.94
UPK3A-202ENST00000396082 TRIM47Q96LD4 638 aa20.95■□□□□ 0.94
UPK3A-202ENST00000396082 SEC62Q99442 399 aaKnown RBP20.95■□□□□ 0.94
UPK3A-202ENST00000396082 MINDY4BA8MYZ0 360 aa20.94■□□□□ 0.94
UPK3A-202ENST00000396082 TRIM6-TRIM34B2RNG4 842 aa20.94■□□□□ 0.94
UPK3A-202ENST00000396082 PRMT2P55345 433 aa20.94■□□□□ 0.94
UPK3A-202ENST00000396082 SLC9C1Q4G0N8 1177 aa20.94■□□□□ 0.94
UPK3A-202ENST00000396082 ZMYM1Q5SVZ6 1142 aa20.94■□□□□ 0.94
UPK3A-202ENST00000396082 C16orf86Q6ZW13 317 aa20.94■□□□□ 0.94
UPK3A-202ENST00000396082 ACER1Q8TDN7 264 aa20.94■□□□□ 0.94
UPK3A-202ENST00000396082 NACAP1Q9BZK3 213 aa20.94■□□□□ 0.94
UPK3A-202ENST00000396082 EMILIN3Q9NT22 766 aa20.94■□□□□ 0.94
UPK3A-202ENST00000396082 SMIM22K7EJ46 135 aa20.93■□□□□ 0.94
UPK3A-202ENST00000396082 AKR1B1P15121 316 aa20.93■□□□□ 0.94
UPK3A-202ENST00000396082 CTGFP29279 349 aa20.93■□□□□ 0.94
UPK3A-202ENST00000396082 HOXA7P31268 230 aaPredicted RBP20.93■□□□□ 0.94
UPK3A-202ENST00000396082 GUCY1A2P33402 732 aa20.93■□□□□ 0.94
UPK3A-202ENST00000396082 FAM110CQ1W6H9 321 aa20.93■□□□□ 0.94
UPK3A-202ENST00000396082 STK11IPQ8N1F8 1099 aa20.93■□□□□ 0.94
UPK3A-202ENST00000396082 CCDC17Q96LX7 622 aa20.93■□□□□ 0.94
UPK3A-202ENST00000396082 KIAA1683Q9H0B3 1180 aa20.93■□□□□ 0.94
UPK3A-202ENST00000396082 SRRDQ9UH36 339 aa20.93■□□□□ 0.94
UPK3A-202ENST00000396082 MYPNQ86TC9 1320 aa20.93■□□□□ 0.94
UPK3A-202ENST00000396082 PATL2C9JE40 543 aaKnown RBP20.92■□□□□ 0.94
UPK3A-202ENST00000396082 TNPO2O14787 897 aaKnown RBP20.92■□□□□ 0.94
UPK3A-202ENST00000396082 SBK1Q52WX2 424 aa20.92■□□□□ 0.94
UPK3A-202ENST00000396082 NBPF11Q86T75 865 aa20.92■□□□□ 0.94
UPK3A-202ENST00000396082 RAET1EQ8TD07 263 aa20.92■□□□□ 0.94
UPK3A-202ENST00000396082 C12orf42Q96LP6 360 aa20.92■□□□□ 0.94
UPK3A-202ENST00000396082 EPB41L4AQ9HCS5 686 aaPredicted RBP20.92■□□□□ 0.94
UPK3A-202ENST00000396082 ICA1Q05084 483 aa20.91■□□□□ 0.94
UPK3A-202ENST00000396082 RILPL2Q969X0 211 aa20.91■□□□□ 0.94
UPK3A-202ENST00000396082 P2RX7Q99572 595 aaKnown RBP20.91■□□□□ 0.94
UPK3A-202ENST00000396082 NAPBQ9H115 298 aa20.91■□□□□ 0.94
UPK3A-202ENST00000396082 MKNK2Q9HBH9 465 aa20.91■□□□□ 0.94
UPK3A-202ENST00000396082 ARHGEF10LQ9HCE6 1279 aa20.91■□□□□ 0.94
UPK3A-202ENST00000396082 USP17L15C9J2P7 530 aa20.9■□□□□ 0.94
UPK3A-202ENST00000396082 USP17L13C9JLJ4 530 aa20.9■□□□□ 0.94
UPK3A-202ENST00000396082 USP17L11C9JVI0 530 aa20.9■□□□□ 0.94
UPK3A-202ENST00000396082 USP17L18D6R9N7 530 aa20.9■□□□□ 0.94
UPK3A-202ENST00000396082 USP17L22D6RA61 530 aa20.9■□□□□ 0.94
UPK3A-202ENST00000396082 USP17L17D6RBQ6 530 aa20.9■□□□□ 0.94
UPK3A-202ENST00000396082 USP17L19D6RCP7 530 aa20.9■□□□□ 0.94
UPK3A-202ENST00000396082 USP17L20D6RJB6 530 aa20.9■□□□□ 0.94
UPK3A-202ENST00000396082 HERVK_113P62684 666 aa20.9■□□□□ 0.94
UPK3A-202ENST00000396082 USP17L24Q0WX57 530 aa20.9■□□□□ 0.94
UPK3A-202ENST00000396082 IFNL3Q8IZI9 196 aa20.9■□□□□ 0.94
UPK3A-202ENST00000396082 ARMC5Q96C12 935 aa20.9■□□□□ 0.94
UPK3A-202ENST00000396082 SH2D4AQ9H788 454 aa20.9■□□□□ 0.94
UPK3A-202ENST00000396082 VCAM1P19320 739 aa20.89■□□□□ 0.93
UPK3A-202ENST00000396082 ATP2B2Q01814 1243 aa20.89■□□□□ 0.93
UPK3A-202ENST00000396082 MLLT1Q03111 559 aaPredicted RBP20.89■□□□□ 0.93
UPK3A-202ENST00000396082 PRKCZQ05513 592 aa20.89■□□□□ 0.93
UPK3A-202ENST00000396082 CCDC129Q6ZRS4 1044 aa20.89■□□□□ 0.93
UPK3A-202ENST00000396082 CLEC10AQ8IUN9 316 aa20.89■□□□□ 0.93
UPK3A-202ENST00000396082 PLEKHM2Q8IWE5 1019 aa20.89■□□□□ 0.93
UPK3A-202ENST00000396082 GTF3C2Q8WUA4 911 aaPredicted RBP20.89■□□□□ 0.93
UPK3A-202ENST00000396082 COA7Q96BR5 231 aa20.89■□□□□ 0.93
UPK3A-202ENST00000396082 ZNF287Q9HBT7 754 aa20.89■□□□□ 0.93
UPK3A-202ENST00000396082 ROBO3Q96MS0 1386 aa20.88■□□□□ 0.93
UPK3A-202ENST00000396082 RGS19P49795 217 aa20.88■□□□□ 0.93
UPK3A-202ENST00000396082 SH3TC2Q8TF17 1288 aa20.88■□□□□ 0.93
UPK3A-202ENST00000396082 PAGR1Q9BTK6 254 aa20.88■□□□□ 0.93
UPK3A-202ENST00000396082 HELLSQ9NRZ9 838 aa20.88■□□□□ 0.93
UPK3A-202ENST00000396082 A0A1W2PRG0 241 aa20.87■□□□□ 0.93
UPK3A-202ENST00000396082 MYCP01106 439 aaPredicted RBP20.87■□□□□ 0.93
UPK3A-202ENST00000396082 SLC3A2P08195 630 aaKnown RBP20.87■□□□□ 0.93
UPK3A-202ENST00000396082 CCAR1Q8IX12 1150 aaKnown RBP20.87■□□□□ 0.93
UPK3A-202ENST00000396082 OSBPL3Q9H4L5 887 aa20.87■□□□□ 0.93
UPK3A-202ENST00000396082 RPAP3Q9H6T3 665 aaPredicted RBP20.87■□□□□ 0.93
UPK3A-202ENST00000396082 KANSL2Q9H9L4 492 aa20.87■□□□□ 0.93
UPK3A-202ENST00000396082 TICAM2Q86XR7 235 aa20.86■□□□□ 0.93
UPK3A-202ENST00000396082 GPRC5AQ8NFJ5 357 aa20.86■□□□□ 0.93
UPK3A-202ENST00000396082 ZNF333Q96JL9 665 aa20.86■□□□□ 0.93
UPK3A-202ENST00000396082 TMEM106CQ9BVX2 250 aa20.86■□□□□ 0.93
UPK3A-202ENST00000396082 TANGO6Q9C0B7 1094 aa20.86■□□□□ 0.93
UPK3A-202ENST00000396082 MORF4L1Q9UBU8 362 aa20.86■□□□□ 0.93
UPK3A-202ENST00000396082 BIN2Q9UBW5 565 aaPredicted RBP20.86■□□□□ 0.93
UPK3A-202ENST00000396082 GABRQQ9UN88 632 aa20.86■□□□□ 0.93
UPK3A-202ENST00000396082 A0A0D9SFI3 127 aa20.85■□□□□ 0.93
UPK3A-202ENST00000396082 RASA1P20936 1047 aa20.85■□□□□ 0.93
UPK3A-202ENST00000396082 GRK4P32298 578 aa20.85■□□□□ 0.93
UPK3A-202ENST00000396082 FLT3LGP49771 235 aa20.85■□□□□ 0.93
UPK3A-202ENST00000396082 PDE4BQ07343 736 aa20.85■□□□□ 0.93
UPK3A-202ENST00000396082 CATSPERGQ6ZRH7 1159 aa20.85■□□□□ 0.93
UPK3A-202ENST00000396082 ZNF444Q8N0Y2 327 aaPredicted RBP20.85■□□□□ 0.93
UPK3A-202ENST00000396082 LPAR1Q92633 364 aa20.85■□□□□ 0.93
UPK3A-202ENST00000396082 FAM227BQ96M60 508 aa20.85■□□□□ 0.93
UPK3A-202ENST00000396082 CWC22Q9HCG8 908 aaKnown RBP20.85■□□□□ 0.93
UPK3A-202ENST00000396082 TMX2Q9Y320 296 aa20.85■□□□□ 0.93
UPK3A-202ENST00000396082 RAD21O60216 631 aa20.84■□□□□ 0.93
UPK3A-202ENST00000396082 PEX10O60683 326 aa20.84■□□□□ 0.93
UPK3A-202ENST00000396082 PRDM1O75626 825 aa20.84■□□□□ 0.93
UPK3A-202ENST00000396082 EEF2P13639 858 aaKnown RBP20.84■□□□□ 0.93
UPK3A-202ENST00000396082 PPARAQ07869 468 aa20.84■□□□□ 0.93
UPK3A-202ENST00000396082 NMIQ13287 307 aaPredicted RBP20.84■□□□□ 0.93
UPK3A-202ENST00000396082 MCMDC2Q4G0Z9 681 aa20.84■□□□□ 0.93
UPK3A-202ENST00000396082 TXNRD2Q9NNW7 524 aa20.84■□□□□ 0.93
UPK3A-202ENST00000396082 ERVK-9P63128 1117 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms