RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 LOC285556D6RIA3 1793 aa16.51■□□□□ 0.23
CXCL12-205ENST00000395794 PTPRFP10586 1907 aa16.51■□□□□ 0.23
CXCL12-205ENST00000395794 USP17L15C9J2P7 530 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 USP17L13C9JLJ4 530 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 USP17L12C9JPN9 530 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 USP17L11C9JVI0 530 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 USP17L21D6R901 530 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 USP17L18D6R9N7 530 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 USP17L22D6RA61 530 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 USP17L17D6RBQ6 530 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 USP17L19D6RCP7 530 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 USP17L20D6RJB6 530 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 RNF113AO15541 343 aaKnown RBP16.5■□□□□ 0.23
CXCL12-205ENST00000395794 USP17L24Q0WX57 530 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 IRF5Q13568 498 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 SEPT2Q15019 361 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 ANKRD45Q5TZF3 282 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 C12orf60Q5U649 245 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 TMEM179Q6ZVK1 233 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 APPBP2Q92624 585 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 GCC1Q96CN9 775 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 C12orf42Q96LP6 360 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 CCDC17Q96LX7 622 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 MORF4L1Q9UBU8 362 aa16.5■□□□□ 0.23
CXCL12-205ENST00000395794 ZSWIM8A7E2V4 1837 aa16.49■□□□□ 0.23
CXCL12-205ENST00000395794 CHGBP05060 677 aa16.49■□□□□ 0.23
CXCL12-205ENST00000395794 MX1P20591 662 aa16.49■□□□□ 0.23
CXCL12-205ENST00000395794 NKX2-3Q8TAU0 364 aa16.49■□□□□ 0.23
CXCL12-205ENST00000395794 ACER1Q8TDN7 264 aa16.49■□□□□ 0.23
CXCL12-205ENST00000395794 PXYLP1Q8TE99 480 aa16.49■□□□□ 0.23
CXCL12-205ENST00000395794 DYNLL2Q96FJ2 89 aa16.49■□□□□ 0.23
CXCL12-205ENST00000395794 STRBPQ96SI9 672 aaKnown RBP16.49■□□□□ 0.23
CXCL12-205ENST00000395794 CWC22Q9HCG8 908 aaKnown RBP16.49■□□□□ 0.23
CXCL12-205ENST00000395794 ARPP21Q9UBL0 812 aaPredicted RBP16.49■□□□□ 0.23
CXCL12-205ENST00000395794 NAV1Q8NEY1 1877 aa16.48■□□□□ 0.23
CXCL12-205ENST00000395794 GNAT2P19087 354 aa16.48■□□□□ 0.23
CXCL12-205ENST00000395794 HDAC1Q13547 482 aaPredicted RBP16.48■□□□□ 0.23
CXCL12-205ENST00000395794 GIMAP6Q6P9H5 292 aa16.48■□□□□ 0.23
CXCL12-205ENST00000395794 SLC44A5Q8NCS7 719 aa16.48■□□□□ 0.23
CXCL12-205ENST00000395794 PAGR1Q9BTK6 254 aa16.48■□□□□ 0.23
CXCL12-205ENST00000395794 FSD1Q9BTV5 496 aa16.48■□□□□ 0.23
CXCL12-205ENST00000395794 RNF208Q9H0X6 261 aa16.48■□□□□ 0.23
CXCL12-205ENST00000395794 SH2D4AQ9H788 454 aa16.48■□□□□ 0.23
CXCL12-205ENST00000395794 ARHGEF10LQ9HCE6 1279 aa16.48■□□□□ 0.23
CXCL12-205ENST00000395794 CYP2D7A0A087X1C5 515 aa16.47■□□□□ 0.23
CXCL12-205ENST00000395794 APPP05067 770 aa16.47■□□□□ 0.23
CXCL12-205ENST00000395794 CCL5P13501 91 aa16.47■□□□□ 0.23
CXCL12-205ENST00000395794 ELNP15502 786 aa16.47■□□□□ 0.23
CXCL12-205ENST00000395794 VCAM1P19320 739 aa16.47■□□□□ 0.23
CXCL12-205ENST00000395794 MAPK4P31152 587 aa16.47■□□□□ 0.23
CXCL12-205ENST00000395794 GUCY1A2P33402 732 aa16.47■□□□□ 0.23
CXCL12-205ENST00000395794 CDK8P49336 464 aa16.47■□□□□ 0.23
CXCL12-205ENST00000395794 EVX2Q03828 476 aa16.47■□□□□ 0.23
CXCL12-205ENST00000395794 MTFR1Q15390 333 aa16.47■□□□□ 0.23
CXCL12-205ENST00000395794 CTR9Q6PD62 1173 aa16.47■□□□□ 0.23
CXCL12-205ENST00000395794 ERVK-9P63128 1117 aa16.46■□□□□ 0.23
CXCL12-205ENST00000395794 ERVK-24P63145 666 aa16.46■□□□□ 0.23
CXCL12-205ENST00000395794 CCNA1P78396 465 aa16.46■□□□□ 0.23
CXCL12-205ENST00000395794 PRPF38BQ5VTL8 546 aaKnown RBP16.46■□□□□ 0.23
CXCL12-205ENST00000395794 CATSPERGQ6ZRH7 1159 aa16.46■□□□□ 0.23
CXCL12-205ENST00000395794 C16orf86Q6ZW13 317 aa16.46■□□□□ 0.23
CXCL12-205ENST00000395794 PI4K2BQ8TCG2 481 aa16.46■□□□□ 0.23
CXCL12-205ENST00000395794 OTUD7AQ8TE49 926 aaPredicted RBP16.46■□□□□ 0.23
CXCL12-205ENST00000395794 OSBP2Q969R2 916 aa16.46■□□□□ 0.23
CXCL12-205ENST00000395794 NACAP1Q9BZK3 213 aa16.46■□□□□ 0.23
CXCL12-205ENST00000395794 RWDD1Q9H446 243 aaPredicted RBP16.46■□□□□ 0.23
CXCL12-205ENST00000395794 RPAP3Q9H6T3 665 aaPredicted RBP16.46■□□□□ 0.23
CXCL12-205ENST00000395794 RBPJLQ9UBG7 517 aa16.46■□□□□ 0.23
CXCL12-205ENST00000395794 RABGAP1Q9Y3P9 1069 aa16.46■□□□□ 0.23
CXCL12-205ENST00000395794 TNRC18O15417 2968 aaPredicted RBP16.46■□□□□ 0.23
CXCL12-205ENST00000395794 DDX60LQ5H9U9 1706 aaKnown RBP16.45■□□□□ 0.22
CXCL12-205ENST00000395794 MINDY4BA8MYZ0 360 aa16.45■□□□□ 0.22
CXCL12-205ENST00000395794 GPAA1O43292 621 aa16.45■□□□□ 0.22
CXCL12-205ENST00000395794 INHAP05111 366 aa16.45■□□□□ 0.22
CXCL12-205ENST00000395794 GJB1P08034 283 aa16.45■□□□□ 0.22
CXCL12-205ENST00000395794 AKR1B1P15121 316 aa16.45■□□□□ 0.22
CXCL12-205ENST00000395794 TDO2P48775 406 aa16.45■□□□□ 0.22
CXCL12-205ENST00000395794 ICA1Q05084 483 aa16.45■□□□□ 0.22
CXCL12-205ENST00000395794 SOCS4Q8WXH5 440 aa16.45■□□□□ 0.22
CXCL12-205ENST00000395794 TANGO6Q9C0B7 1094 aa16.45■□□□□ 0.22
CXCL12-205ENST00000395794 MKNK2Q9HBH9 465 aa16.45■□□□□ 0.22
CXCL12-205ENST00000395794 ZNF287Q9HBT7 754 aa16.45■□□□□ 0.22
CXCL12-205ENST00000395794 TXNRD2Q9NNW7 524 aa16.45■□□□□ 0.22
CXCL12-205ENST00000395794 GSG1L2A8MUP6 293 aa16.44■□□□□ 0.22
CXCL12-205ENST00000395794 ATP2B2Q01814 1243 aa16.44■□□□□ 0.22
CXCL12-205ENST00000395794 SBK1Q52WX2 424 aa16.44■□□□□ 0.22
CXCL12-205ENST00000395794 LPAR1Q92633 364 aa16.44■□□□□ 0.22
CXCL12-205ENST00000395794 NUDT12Q9BQG2 462 aa16.44■□□□□ 0.22
CXCL12-205ENST00000395794 KANSL2Q9H9L4 492 aa16.44■□□□□ 0.22
CXCL12-205ENST00000395794 HOXC10Q9NYD6 342 aa16.44■□□□□ 0.22
CXCL12-205ENST00000395794 CENPFP49454 3210 aa16.44■□□□□ 0.22
CXCL12-205ENST00000395794 RBBP6Q7Z6E9 1792 aaKnown RBP16.43■□□□□ 0.22
CXCL12-205ENST00000395794 A0A1W2PRG0 241 aa16.43■□□□□ 0.22
CXCL12-205ENST00000395794 PATL2C9JE40 543 aaKnown RBP16.43■□□□□ 0.22
CXCL12-205ENST00000395794 M0R2C6 588 aa16.43■□□□□ 0.22
CXCL12-205ENST00000395794 CAPN2P17655 700 aa16.43■□□□□ 0.22
CXCL12-205ENST00000395794 GJA8P48165 433 aa16.43■□□□□ 0.22
CXCL12-205ENST00000395794 COG2Q14746 738 aa16.43■□□□□ 0.22
CXCL12-205ENST00000395794 Q3C1V9 767 aa16.43■□□□□ 0.22
CXCL12-205ENST00000395794 WDR78Q5VTH9 848 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms