RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 RNF216Q9NWF9 866 aaPredicted RBP6.43□□□□□ -1.38
RFFL-202ENST00000394597 SEC31AO94979 1220 aaKnown RBP6.43□□□□□ -1.38
RFFL-202ENST00000394597 DOK7Q18PE1 504 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 ATL3Q6DD88 541 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 ISM2Q6H9L7 571 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 MMS22LQ6ZRQ5 1243 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 MAPKAPK5Q8IW41 473 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 FAM212AQ96EL1 285 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 ATP8A2Q9NTI2 1148 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 DACH1Q9UI36 760 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 ABCC12Q96J65 1359 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 ELP1O95163 1332 aa6.43□□□□□ -1.38
RFFL-202ENST00000394597 CTIFO43310 598 aaKnown RBP6.42□□□□□ -1.38
RFFL-202ENST00000394597 PFKFB2O60825 505 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 CASP7P55210 303 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 CUL4AQ13619 759 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 BRAPQ7Z569 592 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 KCNG4Q8TDN1 519 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 SMARCE1Q969G3 411 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 TTF2Q9UNY4 1162 aaKnown RBP6.42□□□□□ -1.38
RFFL-202ENST00000394597 PPIP5K2O43314 1243 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 KIF1CO43896 1103 aaKnown RBP6.42□□□□□ -1.38
RFFL-202ENST00000394597 BIRC2Q13490 618 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 POTEDQ86YR6 584 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 AOPEPQ8N6M6 819 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 CCDC148Q8NFR7 591 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 EXOC4Q96A65 974 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 MASTLQ96GX5 879 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 ZCCHC17Q9NP64 241 aaKnown RBP6.42□□□□□ -1.38
RFFL-202ENST00000394597 SUFUQ9UMX1 484 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 UBN2Q6ZU65 1347 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 GOLGA6L10A6NI86 522 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 BIN1O00499 593 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 PCP11498 1178 aaKnown RBP6.42□□□□□ -1.38
RFFL-202ENST00000394597 MCM3P25205 808 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 GCKP35557 465 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 ZNF76P36508 570 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 SRLQ86TD4 932 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 EFCAB13Q8IY85 973 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 CACTINQ8WUQ7 758 aaKnown RBP6.42□□□□□ -1.38
RFFL-202ENST00000394597 TEKT1Q969V4 418 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 CCDC43Q96MW1 224 aaKnown RBP6.42□□□□□ -1.38
RFFL-202ENST00000394597 SCLT1Q96NL6 688 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 SLC4A9Q96Q91 983 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 STRBPQ96SI9 672 aaKnown RBP6.42□□□□□ -1.38
RFFL-202ENST00000394597 VEZTQ9HBM0 779 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 USP40Q9NVE5 1235 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 PUF60Q9UHX1 559 aaKnown RBP6.42□□□□□ -1.38
RFFL-202ENST00000394597 DEXIO95424 95 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 BMP15O95972 392 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 RHOXF2BP0C7M4 288 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 CALML3P27482 149 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 ARID4AP29374 1257 aaPredicted RBP6.42□□□□□ -1.38
RFFL-202ENST00000394597 TFAP4Q01664 338 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 AFAP1L1Q8TED9 768 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 ZNF512BQ96KM6 892 aaPredicted RBP6.42□□□□□ -1.38
RFFL-202ENST00000394597 KIF2CQ99661 725 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 RHOXF2Q9BQY4 288 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 RABEP2Q9H5N1 569 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.42□□□□□ -1.38
RFFL-202ENST00000394597 MRVI1Q9Y6F6 885 aa6.42□□□□□ -1.38
RFFL-202ENST00000394597 ABCC6O95255 1503 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 EIF3CLB5ME19 914 aaKnown RBP6.41□□□□□ -1.38
RFFL-202ENST00000394597 JAK2O60674 1132 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 DYNLL1P63167 89 aaKnown RBP6.41□□□□□ -1.38
RFFL-202ENST00000394597 TMED8Q6PL24 325 aaPredicted RBP6.41□□□□□ -1.38
RFFL-202ENST00000394597 LRRC8AQ8IWT6 810 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 LCORLQ8N3X6 602 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 EIF3CQ99613 913 aaKnown RBP6.41□□□□□ -1.38
RFFL-202ENST00000394597 MED23Q9ULK4 1368 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 PRKAB2O43741 272 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 SSBP05455 408 aaKnown RBP eCLIP6.41□□□□□ -1.38
RFFL-202ENST00000394597 PDIA3P30101 505 aaKnown RBP6.41□□□□□ -1.38
RFFL-202ENST00000394597 BTDP43251 543 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 SATB1Q01826 763 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 SCARF1Q14162 830 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 SLFNL1Q499Z3 407 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 SLC10A5Q5PT55 438 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 CUL5Q93034 780 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 FAM84BQ96KN1 310 aaPredicted RBP6.41□□□□□ -1.38
RFFL-202ENST00000394597 BRIP1Q9BX63 1249 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 ADAM21Q9UKJ8 722 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 DLG5Q8TDM6 1919 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 RPAP1Q9BWH6 1393 aaPredicted RBP6.41□□□□□ -1.38
RFFL-202ENST00000394597 A0A087WUV0 522 aaPredicted RBP6.41□□□□□ -1.38
RFFL-202ENST00000394597 SPTLC2O15270 562 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 ATP2C2O75185 946 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 FILIP1LQ4L180 1135 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 ODF2Q5BJF6 829 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 RBM26Q5T8P6 1007 aaKnown RBP6.41□□□□□ -1.38
RFFL-202ENST00000394597 CC2D2BQ6DHV5 1058 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 PRR5LQ6MZQ0 368 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 HEATR3Q7Z4Q2 680 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 NIM1KQ8IY84 436 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 CEP112Q8N8E3 955 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 CNNM3Q8NE01 707 aa6.41□□□□□ -1.38
RFFL-202ENST00000394597 RRP36Q96EU6 259 aaKnown RBP6.41□□□□□ -1.38
RFFL-202ENST00000394597 RSRC1Q96IZ7 334 aaKnown RBP6.41□□□□□ -1.38
RFFL-202ENST00000394597 ZSCAN10Q96SZ4 725 aaPredicted RBP6.41□□□□□ -1.38
RFFL-202ENST00000394597 JPH2Q9BR39 696 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms