RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 SSC5DA1L4H1 1573 aa28.45■■■□□ 2.14
LRFN4-202ENST00000393952 HSP90AA1P07900 732 aaKnown RBP28.45■■■□□ 2.14
LRFN4-202ENST00000393952 POTEIP0CG38 1075 aa28.45■■■□□ 2.14
LRFN4-202ENST00000393952 POTEJP0CG39 1038 aa28.45■■■□□ 2.14
LRFN4-202ENST00000393952 CLEC10AQ8IUN9 316 aa28.45■■■□□ 2.14
LRFN4-202ENST00000393952 ZNF526Q8TF50 670 aaPredicted RBP28.45■■■□□ 2.14
LRFN4-202ENST00000393952 MYL10Q9BUA6 226 aa28.45■■■□□ 2.14
LRFN4-202ENST00000393952 STX8Q9UNK0 236 aa28.45■■■□□ 2.14
LRFN4-202ENST00000393952 USP48Q86UV5 1035 aa28.44■■■□□ 2.14
LRFN4-202ENST00000393952 ZNF654Q8IZM8 581 aa28.44■■■□□ 2.14
LRFN4-202ENST00000393952 GTF3C6Q969F1 213 aa28.44■■■□□ 2.14
LRFN4-202ENST00000393952 HOOK2Q96ED9 719 aa28.44■■■□□ 2.14
LRFN4-202ENST00000393952 NMRK2Q9NPI5 230 aa28.44■■■□□ 2.14
LRFN4-202ENST00000393952 MTMR4Q9NYA4 1195 aa28.44■■■□□ 2.14
LRFN4-202ENST00000393952 CLEC11AQ9Y240 323 aa28.44■■■□□ 2.14
LRFN4-202ENST00000393952 ZBTB43O43298 467 aa28.43■■■□□ 2.14
LRFN4-202ENST00000393952 GH2P01242 217 aa28.43■■■□□ 2.14
LRFN4-202ENST00000393952 GUCY1A2P33402 732 aa28.43■■■□□ 2.14
LRFN4-202ENST00000393952 NOVP48745 357 aa28.43■■■□□ 2.14
LRFN4-202ENST00000393952 CCT2P78371 535 aaKnown RBP28.43■■■□□ 2.14
LRFN4-202ENST00000393952 DCAF15Q66K64 600 aa28.43■■■□□ 2.14
LRFN4-202ENST00000393952 TMEM179Q6ZVK1 233 aa28.43■■■□□ 2.14
LRFN4-202ENST00000393952 MICU3Q86XE3 530 aa28.43■■■□□ 2.14
LRFN4-202ENST00000393952 PHF20L1A8MW92 1017 aa28.42■■■□□ 2.14
LRFN4-202ENST00000393952 RXRAP19793 462 aa28.42■■■□□ 2.14
LRFN4-202ENST00000393952 SCRN1Q12765 414 aa28.42■■■□□ 2.14
LRFN4-202ENST00000393952 SEPT2Q15019 361 aa28.42■■■□□ 2.14
LRFN4-202ENST00000393952 SUPT20HL1Q3ZLR7 823 aa28.42■■■□□ 2.14
LRFN4-202ENST00000393952 SYNE3Q6ZMZ3 975 aa28.42■■■□□ 2.14
LRFN4-202ENST00000393952 TMEM47Q9BQJ4 181 aa28.42■■■□□ 2.14
LRFN4-202ENST00000393952 KAT14Q9H8E8 782 aa28.42■■■□□ 2.14
LRFN4-202ENST00000393952 NCOA5Q9HCD5 579 aaKnown RBP28.42■■■□□ 2.14
LRFN4-202ENST00000393952 ZNF341Q9BYN7 854 aa28.41■■■□□ 2.14
LRFN4-202ENST00000393952 CABP5Q9NP86 173 aa28.41■■■□□ 2.14
LRFN4-202ENST00000393952 ATAD5Q96QE3 1844 aa28.41■■■□□ 2.14
LRFN4-202ENST00000393952 CATIPQ7Z7H3 387 aa28.41■■■□□ 2.14
LRFN4-202ENST00000393952 GLIS2Q9BZE0 524 aaPredicted RBP28.41■■■□□ 2.14
LRFN4-202ENST00000393952 MYH4Q9Y623 1939 aa28.4■■■□□ 2.14
LRFN4-202ENST00000393952 CAP2P40123 477 aa28.4■■■□□ 2.14
LRFN4-202ENST00000393952 METAP2P50579 478 aaKnown RBP eCLIP28.4■■■□□ 2.148e-8■■■■■ 32.5
LRFN4-202ENST00000393952 CCDC144CPQ8IYA2 1237 aa28.4■■■□□ 2.14
LRFN4-202ENST00000393952 ZBTB21Q9ULJ3 1066 aa28.4■■■□□ 2.14
LRFN4-202ENST00000393952 FZD1Q9UP38 647 aa28.4■■■□□ 2.14
LRFN4-202ENST00000393952 GOLGA8AA7E2F4 631 aa28.39■■■□□ 2.14
LRFN4-202ENST00000393952 DTNBO60941 627 aa28.39■■■□□ 2.14
LRFN4-202ENST00000393952 TOP1P11387 765 aaKnown RBP28.39■■■□□ 2.14
LRFN4-202ENST00000393952 RAB3GAP1Q15042 981 aa28.39■■■□□ 2.14
LRFN4-202ENST00000393952 PNMA1Q8ND90 353 aa28.39■■■□□ 2.14
LRFN4-202ENST00000393952 NUP133Q8WUM0 1156 aa28.39■■■□□ 2.14
LRFN4-202ENST00000393952 CDCA5Q96FF9 252 aa28.39■■■□□ 2.14
LRFN4-202ENST00000393952 INTS4Q96HW7 963 aaKnown RBP28.39■■■□□ 2.14
LRFN4-202ENST00000393952 KANSL2Q9H9L4 492 aa28.39■■■□□ 2.14
LRFN4-202ENST00000393952 CLIP2Q9UDT6 1046 aa28.39■■■□□ 2.14
LRFN4-202ENST00000393952 TTLL1O95922 423 aa28.38■■■□□ 2.13
LRFN4-202ENST00000393952 CDC37L1Q7L3B6 337 aa28.38■■■□□ 2.13
LRFN4-202ENST00000393952 NID2Q14112 1375 aa28.37■■■□□ 2.13
LRFN4-202ENST00000393952 DDAH1O94760 285 aa28.37■■■□□ 2.13
LRFN4-202ENST00000393952 RCAN1P53805 252 aa28.37■■■□□ 2.13
LRFN4-202ENST00000393952 ATP2B2Q01814 1243 aa28.37■■■□□ 2.13
LRFN4-202ENST00000393952 ICA1Q05084 483 aa28.37■■■□□ 2.13
LRFN4-202ENST00000393952 TROAPQ12815 778 aa28.37■■■□□ 2.13
LRFN4-202ENST00000393952 MAP1SQ66K74 1059 aaPredicted RBP28.37■■■□□ 2.13
LRFN4-202ENST00000393952 INPP5BP32019 993 aa28.37■■■□□ 2.13
LRFN4-202ENST00000393952 PPP4R3BQ5MIZ7 849 aa28.37■■■□□ 2.13
LRFN4-202ENST00000393952 LRRC47Q8N1G4 583 aaKnown RBP28.37■■■□□ 2.13
LRFN4-202ENST00000393952 NYAP2Q9P242 653 aa28.37■■■□□ 2.13
LRFN4-202ENST00000393952 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.37■■■□□ 2.13
LRFN4-202ENST00000393952 ZNF112Q9UJU3 913 aa28.37■■■□□ 2.13
LRFN4-202ENST00000393952 EEF2P13639 858 aaKnown RBP28.36■■■□□ 2.13
LRFN4-202ENST00000393952 CDC27P30260 824 aa28.36■■■□□ 2.13
LRFN4-202ENST00000393952 PRKG1Q13976 671 aa28.36■■■□□ 2.13
LRFN4-202ENST00000393952 SIAH1Q8IUQ4 282 aa28.36■■■□□ 2.13
LRFN4-202ENST00000393952 FAM217BQ9NTX9 383 aaPredicted RBP28.36■■■□□ 2.13
LRFN4-202ENST00000393952 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.36■■■□□ 2.13
LRFN4-202ENST00000393952 CTNND1O60716 968 aaKnown RBP28.35■■■□□ 2.13
LRFN4-202ENST00000393952 CALM1P0DP23 149 aa28.35■■■□□ 2.13
LRFN4-202ENST00000393952 CALM2P0DP24 149 aa28.35■■■□□ 2.13
LRFN4-202ENST00000393952 CALM3P0DP25 149 aa28.35■■■□□ 2.13
LRFN4-202ENST00000393952 ADD1P35611 737 aaKnown RBP28.35■■■□□ 2.13
LRFN4-202ENST00000393952 DOCK1Q14185 1865 aa28.35■■■□□ 2.13
LRFN4-202ENST00000393952 RTN1Q16799 776 aa28.35■■■□□ 2.13
LRFN4-202ENST00000393952 LDHDQ86WU2 507 aa28.35■■■□□ 2.13
LRFN4-202ENST00000393952 FANCBQ8NB91 859 aa28.35■■■□□ 2.13
LRFN4-202ENST00000393952 WRNIP1Q96S55 665 aa28.35■■■□□ 2.13
LRFN4-202ENST00000393952 MTMR7Q9Y216 660 aa28.35■■■□□ 2.13
LRFN4-202ENST00000393952 CTDNEP1O95476 244 aa28.33■■■□□ 2.13
LRFN4-202ENST00000393952 ASNSP08243 561 aa28.33■■■□□ 2.13
LRFN4-202ENST00000393952 CHMP4CQ96CF2 233 aa28.33■■■□□ 2.13
LRFN4-202ENST00000393952 KLRG1Q96E93 195 aa28.33■■■□□ 2.13
LRFN4-202ENST00000393952 JAK2O60674 1132 aa28.33■■■□□ 2.12
LRFN4-202ENST00000393952 USP2O75604 605 aaPredicted RBP28.33■■■□□ 2.12
LRFN4-202ENST00000393952 NSUN7Q8NE18 718 aaKnown RBP28.33■■■□□ 2.12
LRFN4-202ENST00000393952 MKL1Q969V6 931 aa28.33■■■□□ 2.12
LRFN4-202ENST00000393952 SMC3Q9UQE7 1217 aa28.33■■■□□ 2.12
LRFN4-202ENST00000393952 DHX16O60231 1041 aaKnown RBP28.32■■■□□ 2.12
LRFN4-202ENST00000393952 NF2P35240 595 aa28.32■■■□□ 2.12
LRFN4-202ENST00000393952 RASGRP2Q7LDG7 609 aa28.32■■■□□ 2.12
LRFN4-202ENST00000393952 CCDC84Q86UT8 332 aaPredicted RBP28.32■■■□□ 2.12
LRFN4-202ENST00000393952 ZKSCAN4Q969J2 545 aaPredicted RBP28.32■■■□□ 2.12
LRFN4-202ENST00000393952 GINM1Q9NU53 330 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms