RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 TIAM2Q8IVF5 1701 aa21.83■■□□□ 1.09
CCDC50-202ENST00000392456 PTGER2P43116 358 aa21.83■■□□□ 1.08
CCDC50-202ENST00000392456 CCDC93Q567U6 631 aa21.83■■□□□ 1.08
CCDC50-202ENST00000392456 SRLQ86TD4 932 aa21.83■■□□□ 1.08
CCDC50-202ENST00000392456 KIAA0825Q8IV33 1275 aa21.83■■□□□ 1.08
CCDC50-202ENST00000392456 CNNM2Q9H8M5 875 aa21.83■■□□□ 1.08
CCDC50-202ENST00000392456 LY9Q9HBG7 655 aa21.83■■□□□ 1.08
CCDC50-202ENST00000392456 TGFB2P61812 414 aa21.82■■□□□ 1.08
CCDC50-202ENST00000392456 FBXO38Q6PIJ6 1188 aa21.82■■□□□ 1.08
CCDC50-202ENST00000392456 KRT23Q9C075 422 aa21.82■■□□□ 1.08
CCDC50-202ENST00000392456 PIM2Q9P1W9 311 aa21.82■■□□□ 1.08
CCDC50-202ENST00000392456 WDR19Q8NEZ3 1342 aa21.82■■□□□ 1.08
CCDC50-202ENST00000392456 KIF13BQ9NQT8 1826 aa21.82■■□□□ 1.08
CCDC50-202ENST00000392456 PLCD1P51178 756 aa21.82■■□□□ 1.08
CCDC50-202ENST00000392456 TEX11Q8IYF3 940 aa21.82■■□□□ 1.08
CCDC50-202ENST00000392456 DYNLL2Q96FJ2 89 aa21.82■■□□□ 1.08
CCDC50-202ENST00000392456 MYL10Q9BUA6 226 aa21.82■■□□□ 1.08
CCDC50-202ENST00000392456 KIAA1551Q9HCM1 1747 aa21.81■■□□□ 1.08
CCDC50-202ENST00000392456 IFIT3O14879 490 aaKnown RBP21.81■■□□□ 1.08
CCDC50-202ENST00000392456 STX6O43752 255 aa21.81■■□□□ 1.08
CCDC50-202ENST00000392456 TMEM67Q5HYA8 995 aa21.81■■□□□ 1.08
CCDC50-202ENST00000392456 STRIP1Q5VSL9 837 aa21.81■■□□□ 1.08
CCDC50-202ENST00000392456 NSUN7Q8NE18 718 aaKnown RBP21.81■■□□□ 1.08
CCDC50-202ENST00000392456 CCDC112Q8NEF3 446 aa21.81■■□□□ 1.08
CCDC50-202ENST00000392456 RNF41Q9H4P4 317 aaPredicted RBP21.81■■□□□ 1.08
CCDC50-202ENST00000392456 PAXBP1Q9Y5B6 917 aa21.81■■□□□ 1.08
CCDC50-202ENST00000392456 GOLGA8BA8MQT2 603 aa21.81■■□□□ 1.08
CCDC50-202ENST00000392456 SBK1Q52WX2 424 aa21.81■■□□□ 1.08
CCDC50-202ENST00000392456 COL4A5P29400 1685 aa21.8■■□□□ 1.08
CCDC50-202ENST00000392456 FGRP09769 529 aa21.8■■□□□ 1.08
CCDC50-202ENST00000392456 C12orf60Q5U649 245 aa21.8■■□□□ 1.08
CCDC50-202ENST00000392456 SUGT1Q9Y2Z0 365 aa21.8■■□□□ 1.08
CCDC50-202ENST00000392456 RANBP6O60518 1105 aaKnown RBP21.8■■□□□ 1.08
CCDC50-202ENST00000392456 TTC31Q49AM3 519 aaPredicted RBP21.8■■□□□ 1.08
CCDC50-202ENST00000392456 RTKN2Q8IZC4 609 aa21.8■■□□□ 1.08
CCDC50-202ENST00000392456 TMEM87BQ96K49 555 aa21.8■■□□□ 1.08
CCDC50-202ENST00000392456 DEF6Q9H4E7 631 aa21.8■■□□□ 1.08
CCDC50-202ENST00000392456 ARPP21Q9UBL0 812 aaPredicted RBP21.8■■□□□ 1.08
CCDC50-202ENST00000392456 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.8■■□□□ 1.08
CCDC50-202ENST00000392456 ADAMTSL1Q8N6G6 1762 aa21.79■■□□□ 1.08
CCDC50-202ENST00000392456 USP17L3A6NCW0 530 aa21.79■■□□□ 1.08
CCDC50-202ENST00000392456 USP17L4A6NCW7 530 aa21.79■■□□□ 1.08
CCDC50-202ENST00000392456 BMS1Q14692 1282 aaKnown RBP21.79■■□□□ 1.08
CCDC50-202ENST00000392456 FAM47AQ5JRC9 791 aa21.79■■□□□ 1.08
CCDC50-202ENST00000392456 SWT1Q5T5J6 900 aaKnown RBP21.79■■□□□ 1.08
CCDC50-202ENST00000392456 USP17L1Q7RTZ2 530 aa21.79■■□□□ 1.08
CCDC50-202ENST00000392456 PACS2Q86VP3 889 aa21.79■■□□□ 1.08
CCDC50-202ENST00000392456 CCDC144CPQ8IYA2 1237 aa21.79■■□□□ 1.08
CCDC50-202ENST00000392456 SLC44A5Q8NCS7 719 aa21.79■■□□□ 1.08
CCDC50-202ENST00000392456 MTMR6Q9Y217 621 aa21.79■■□□□ 1.08
CCDC50-202ENST00000392456 LARP1BQ659C4 914 aaKnown RBP21.79■■□□□ 1.08
CCDC50-202ENST00000392456 APOBEC3HQ6NTF7 200 aaKnown RBP21.79■■□□□ 1.08
CCDC50-202ENST00000392456 APOA5Q6Q788 366 aa21.79■■□□□ 1.08
CCDC50-202ENST00000392456 SMARCC2Q8TAQ2 1214 aa21.79■■□□□ 1.08
CCDC50-202ENST00000392456 PSMD1Q99460 953 aa21.79■■□□□ 1.08
CCDC50-202ENST00000392456 FLT1P17948 1338 aa21.78■■□□□ 1.08
CCDC50-202ENST00000392456 NMT2O60551 498 aa21.78■■□□□ 1.08
CCDC50-202ENST00000392456 SLF2Q8IX21 1173 aa21.78■■□□□ 1.08
CCDC50-202ENST00000392456 SUPT20HQ8NEM7 779 aa21.78■■□□□ 1.08
CCDC50-202ENST00000392456 RRP15Q9Y3B9 282 aaKnown RBP21.78■■□□□ 1.08
CCDC50-202ENST00000392456 ADD1P35611 737 aaKnown RBP21.78■■□□□ 1.08
CCDC50-202ENST00000392456 TEX35Q5T0J7 233 aa21.78■■□□□ 1.08
CCDC50-202ENST00000392456 MICU3Q86XE3 530 aa21.78■■□□□ 1.08
CCDC50-202ENST00000392456 ESR2Q92731 530 aa21.78■■□□□ 1.08
CCDC50-202ENST00000392456 DDX4Q9NQI0 724 aaKnown RBP21.78■■□□□ 1.08
CCDC50-202ENST00000392456 CWC15Q9P013 229 aaKnown RBP21.78■■□□□ 1.08
CCDC50-202ENST00000392456 PTPDC1A2A3K4 754 aa21.77■■□□□ 1.08
CCDC50-202ENST00000392456 TNNT1P13805 278 aa21.77■■□□□ 1.08
CCDC50-202ENST00000392456 PICALMQ13492 652 aa21.77■■□□□ 1.08
CCDC50-202ENST00000392456 ZSCAN26Q16670 478 aa21.77■■□□□ 1.08
CCDC50-202ENST00000392456 DALRD3Q5D0E6 543 aaKnown RBP21.77■■□□□ 1.08
CCDC50-202ENST00000392456 LARGE2Q8N3Y3 721 aa21.77■■□□□ 1.08
CCDC50-202ENST00000392456 WDR33Q9C0J8 1336 aaKnown RBP21.77■■□□□ 1.08
CCDC50-202ENST00000392456 WDHD1O75717 1129 aaPredicted RBP21.77■■□□□ 1.07
CCDC50-202ENST00000392456 RAD17O75943 681 aa21.77■■□□□ 1.07
CCDC50-202ENST00000392456 ZSCAN22P10073 491 aaPredicted RBP21.77■■□□□ 1.07
CCDC50-202ENST00000392456 CDC27P30260 824 aa21.77■■□□□ 1.07
CCDC50-202ENST00000392456 CRKP46108 304 aa21.77■■□□□ 1.07
CCDC50-202ENST00000392456 NFXL1Q6ZNB6 911 aa21.77■■□□□ 1.07
CCDC50-202ENST00000392456 SGMS1Q86VZ5 419 aa21.77■■□□□ 1.07
CCDC50-202ENST00000392456 SYAP1Q96A49 352 aaPredicted RBP21.77■■□□□ 1.07
CCDC50-202ENST00000392456 CDK5RAP2Q96SN8 1893 aa21.76■■□□□ 1.07
CCDC50-202ENST00000392456 VPS37CA5D8V6 355 aaPredicted RBP21.76■■□□□ 1.07
CCDC50-202ENST00000392456 CLSTN1O94985 981 aa21.76■■□□□ 1.07
CCDC50-202ENST00000392456 FDPSP14324 419 aaKnown RBP21.76■■□□□ 1.07
CCDC50-202ENST00000392456 LIFRP42702 1097 aa21.76■■□□□ 1.07
CCDC50-202ENST00000392456 CDC37L1Q7L3B6 337 aa21.76■■□□□ 1.07
CCDC50-202ENST00000392456 TNKSO95271 1327 aa21.76■■□□□ 1.07
CCDC50-202ENST00000392456 FOSBP53539 338 aa21.75■■□□□ 1.07
CCDC50-202ENST00000392456 SEC23AQ15436 765 aa21.75■■□□□ 1.07
CCDC50-202ENST00000392456 CDC42EP5Q6NZY7 148 aa21.75■■□□□ 1.07
CCDC50-202ENST00000392456 NLGN2Q8NFZ4 835 aa21.75■■□□□ 1.07
CCDC50-202ENST00000392456 TEKT1Q969V4 418 aa21.75■■□□□ 1.07
CCDC50-202ENST00000392456 FAM217BQ9NTX9 383 aaPredicted RBP21.75■■□□□ 1.07
CCDC50-202ENST00000392456 USP40Q9NVE5 1235 aa21.75■■□□□ 1.07
CCDC50-202ENST00000392456 POLR3DP05423 398 aaPredicted RBP21.75■■□□□ 1.07
CCDC50-202ENST00000392456 CACNB3P54284 484 aa21.75■■□□□ 1.07
CCDC50-202ENST00000392456 SUGP1Q8IWZ8 645 aaKnown RBP21.75■■□□□ 1.07
CCDC50-202ENST00000392456 ENAHQ8N8S7 591 aaPredicted RBP21.75■■□□□ 1.07
CCDC50-202ENST00000392456 ZNF646O15015 1829 aaPredicted RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms