RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 WDR78Q5VTH9 848 aa16.56■□□□□ 0.24
PRPF18-202ENST00000378572 METTL16Q86W50 562 aaKnown RBP16.56■□□□□ 0.24
PRPF18-202ENST00000378572 CLASRPQ8N2M8 674 aaKnown RBP16.56■□□□□ 0.24
PRPF18-202ENST00000378572 RHPN1Q8TCX5 695 aa16.56■□□□□ 0.24
PRPF18-202ENST00000378572 SOCS4Q8WXH5 440 aa16.56■□□□□ 0.24
PRPF18-202ENST00000378572 PAWRQ96IZ0 340 aaKnown RBP16.56■□□□□ 0.24
PRPF18-202ENST00000378572 NUDT12Q9BQG2 462 aa16.56■□□□□ 0.24
PRPF18-202ENST00000378572 CABP5Q9NP86 173 aa16.56■□□□□ 0.24
PRPF18-202ENST00000378572 NAV1Q8NEY1 1877 aa16.56■□□□□ 0.24
PRPF18-202ENST00000378572 TRIOBPQ9H2D6 2365 aa16.55■□□□□ 0.24
PRPF18-202ENST00000378572 ZKSCAN1P17029 563 aaPredicted RBP16.55■□□□□ 0.24
PRPF18-202ENST00000378572 TRIM32Q13049 653 aa16.55■□□□□ 0.24
PRPF18-202ENST00000378572 ABCB5Q2M3G0 1257 aa16.55■□□□□ 0.24
PRPF18-202ENST00000378572 CERKLQ49MI3 558 aaPredicted RBP16.55■□□□□ 0.24
PRPF18-202ENST00000378572 NECAB2Q7Z6G3 386 aa16.55■□□□□ 0.24
PRPF18-202ENST00000378572 GTF3C2Q8WUA4 911 aaPredicted RBP16.55■□□□□ 0.24
PRPF18-202ENST00000378572 TXNRD2Q9NNW7 524 aa16.55■□□□□ 0.24
PRPF18-202ENST00000378572 RBM27Q9P2N5 1060 aaKnown RBP16.55■□□□□ 0.24
PRPF18-202ENST00000378572 GOLIM4O00461 696 aa16.54■□□□□ 0.24
PRPF18-202ENST00000378572 MPHOSPH10O00566 681 aaKnown RBP16.54■□□□□ 0.24
PRPF18-202ENST00000378572 MAPK4P31152 587 aa16.54■□□□□ 0.24
PRPF18-202ENST00000378572 ERVK-9P63128 1117 aa16.54■□□□□ 0.24
PRPF18-202ENST00000378572 ERVK-24P63145 666 aa16.54■□□□□ 0.24
PRPF18-202ENST00000378572 SLC9C2Q5TAH2 1124 aa16.54■□□□□ 0.24
PRPF18-202ENST00000378572 SKAP1Q86WV1 359 aa16.54■□□□□ 0.24
PRPF18-202ENST00000378572 PIAS4Q8N2W9 510 aaPredicted RBP16.54■□□□□ 0.24
PRPF18-202ENST00000378572 DIS3LQ8TF46 1054 aaKnown RBP16.54■□□□□ 0.24
PRPF18-202ENST00000378572 TRIB2Q92519 343 aa16.54■□□□□ 0.24
PRPF18-202ENST00000378572 CRNKL1Q9BZJ0 848 aaKnown RBP16.54■□□□□ 0.24
PRPF18-202ENST00000378572 EMILIN3Q9NT22 766 aa16.54■□□□□ 0.24
PRPF18-202ENST00000378572 RPTORQ8N122 1335 aa16.54■□□□□ 0.24
PRPF18-202ENST00000378572 PRKAR2AP13861 404 aaKnown RBP16.53■□□□□ 0.24
PRPF18-202ENST00000378572 CAPN2P17655 700 aa16.53■□□□□ 0.24
PRPF18-202ENST00000378572 EHD4Q9H223 541 aa16.53■□□□□ 0.24
PRPF18-202ENST00000378572 GJD2Q9UKL4 321 aa16.53■□□□□ 0.24
PRPF18-202ENST00000378572 PDE6AP16499 860 aa16.53■□□□□ 0.24
PRPF18-202ENST00000378572 USP14P54578 494 aa16.53■□□□□ 0.24
PRPF18-202ENST00000378572 TMED8Q6PL24 325 aaPredicted RBP16.53■□□□□ 0.24
PRPF18-202ENST00000378572 CRISPLD2Q9H0B8 497 aa16.53■□□□□ 0.24
PRPF18-202ENST00000378572 MCM9Q9NXL9 1143 aa16.53■□□□□ 0.24
PRPF18-202ENST00000378572 USP17L15C9J2P7 530 aa16.52■□□□□ 0.24
PRPF18-202ENST00000378572 USP17L13C9JLJ4 530 aa16.52■□□□□ 0.24
PRPF18-202ENST00000378572 USP17L11C9JVI0 530 aa16.52■□□□□ 0.24
PRPF18-202ENST00000378572 USP17L18D6R9N7 530 aa16.52■□□□□ 0.24
PRPF18-202ENST00000378572 USP17L22D6RA61 530 aa16.52■□□□□ 0.24
PRPF18-202ENST00000378572 USP17L17D6RBQ6 530 aa16.52■□□□□ 0.24
PRPF18-202ENST00000378572 USP17L19D6RCP7 530 aa16.52■□□□□ 0.24
PRPF18-202ENST00000378572 USP17L20D6RJB6 530 aa16.52■□□□□ 0.24
PRPF18-202ENST00000378572 RGS2P41220 211 aa16.52■□□□□ 0.24
PRPF18-202ENST00000378572 USP17L24Q0WX57 530 aa16.52■□□□□ 0.24
PRPF18-202ENST00000378572 TATDN1Q6P1N9 297 aa16.52■□□□□ 0.24
PRPF18-202ENST00000378572 PLEKHH3Q7Z736 793 aa16.52■□□□□ 0.24
PRPF18-202ENST00000378572 C7orf61Q8IZ16 206 aa16.52■□□□□ 0.24
PRPF18-202ENST00000378572 PORCNQ9H237 461 aa16.52■□□□□ 0.24
PRPF18-202ENST00000378572 RBPJLQ9UBG7 517 aa16.52■□□□□ 0.24
PRPF18-202ENST00000378572 ZNF532Q9HCE3 1301 aa16.52■□□□□ 0.23
PRPF18-202ENST00000378572 PLXNB2O15031 1838 aa16.51■□□□□ 0.23
PRPF18-202ENST00000378572 SMARCA5O60264 1052 aaPredicted RBP16.51■□□□□ 0.23
PRPF18-202ENST00000378572 CCNA1P78396 465 aa16.51■□□□□ 0.23
PRPF18-202ENST00000378572 GPR142Q7Z601 462 aa16.51■□□□□ 0.23
PRPF18-202ENST00000378572 RIOK1Q9BRS2 568 aaKnown RBP16.51■□□□□ 0.23
PRPF18-202ENST00000378572 SALL3Q9BXA9 1300 aa16.51■□□□□ 0.23
PRPF18-202ENST00000378572 GLRX3O76003 335 aaKnown RBP16.5■□□□□ 0.23
PRPF18-202ENST00000378572 VCAM1P19320 739 aa16.5■□□□□ 0.23
PRPF18-202ENST00000378572 PLCD1P51178 756 aa16.5■□□□□ 0.23
PRPF18-202ENST00000378572 TRMT44Q8IYL2 757 aaKnown RBP16.5■□□□□ 0.23
PRPF18-202ENST00000378572 ANKLE1Q8NAG6 615 aa16.5■□□□□ 0.23
PRPF18-202ENST00000378572 ACER1Q8TDN7 264 aa16.5■□□□□ 0.23
PRPF18-202ENST00000378572 DDX60LQ5H9U9 1706 aaKnown RBP16.5■□□□□ 0.23
PRPF18-202ENST00000378572 SHMT1P34896 483 aa16.5■□□□□ 0.23
PRPF18-202ENST00000378572 Q3C1V9 767 aa16.5■□□□□ 0.23
PRPF18-202ENST00000378572 PLEKHM2Q8IWE5 1019 aa16.5■□□□□ 0.23
PRPF18-202ENST00000378572 SDR42E1Q8WUS8 393 aa16.5■□□□□ 0.23
PRPF18-202ENST00000378572 C12orf42Q96LP6 360 aa16.5■□□□□ 0.23
PRPF18-202ENST00000378572 APBA2Q99767 749 aa16.5■□□□□ 0.23
PRPF18-202ENST00000378572 NBPF3Q9H094 633 aa16.5■□□□□ 0.23
PRPF18-202ENST00000378572 KIAA1683Q9H0B3 1180 aa16.5■□□□□ 0.23
PRPF18-202ENST00000378572 OSBPL3Q9H4L5 887 aa16.5■□□□□ 0.23
PRPF18-202ENST00000378572 C11orf49Q9H6J7 331 aa16.5■□□□□ 0.23
PRPF18-202ENST00000378572 RPAP3Q9H6T3 665 aaPredicted RBP16.5■□□□□ 0.23
PRPF18-202ENST00000378572 IVNS1ABPQ9Y6Y0 642 aa16.5■□□□□ 0.23
PRPF18-202ENST00000378572 SEPT2Q15019 361 aa16.49■□□□□ 0.23
PRPF18-202ENST00000378572 LCORLQ8N3X6 602 aa16.49■□□□□ 0.23
PRPF18-202ENST00000378572 EDC3Q96F86 508 aaKnown RBP16.49■□□□□ 0.23
PRPF18-202ENST00000378572 TANGO6Q9C0B7 1094 aa16.49■□□□□ 0.23
PRPF18-202ENST00000378572 ZMYND8Q9ULU4 1186 aaPredicted RBP16.49■□□□□ 0.23
PRPF18-202ENST00000378572 RABGAP1Q9Y3P9 1069 aa16.49■□□□□ 0.23
PRPF18-202ENST00000378572 XRCC5P13010 732 aaKnown RBP16.48■□□□□ 0.23
PRPF18-202ENST00000378572 CCL14Q16627 93 aa16.48■□□□□ 0.23
PRPF18-202ENST00000378572 AMOTL1Q8IY63 956 aa16.48■□□□□ 0.23
PRPF18-202ENST00000378572 BOLA2Q9H3K6 86 aa16.48■□□□□ 0.23
PRPF18-202ENST00000378572 ARMT1Q9H993 441 aa16.48■□□□□ 0.23
PRPF18-202ENST00000378572 PAG1Q9NWQ8 432 aa16.48■□□□□ 0.23
PRPF18-202ENST00000378572 SAMD1Q6SPF0 538 aaPredicted RBP16.48■□□□□ 0.23
PRPF18-202ENST00000378572 CATSPERGQ6ZRH7 1159 aa16.48■□□□□ 0.23
PRPF18-202ENST00000378572 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.48■□□□□ 0.23
PRPF18-202ENST00000378572 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.48■□□□□ 0.234e-6■■■□□ 18.8
PRPF18-202ENST00000378572 STAP2Q9UGK3 403 aa16.48■□□□□ 0.23
PRPF18-202ENST00000378572 ALPK3Q96L96 1907 aa16.47■□□□□ 0.23
PRPF18-202ENST00000378572 MBD4O95243 580 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms