RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 RIOK3O14730 519 aaKnown RBP12.34□□□□□ -0.43
CXCL12-203ENST00000374429 PRR5LQ6MZQ0 368 aa12.34□□□□□ -0.43
CXCL12-203ENST00000374429 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.34□□□□□ -0.43
CXCL12-203ENST00000374429 SMARCE1Q969G3 411 aa12.34□□□□□ -0.43
CXCL12-203ENST00000374429 GTPBP4Q9BZE4 634 aaKnown RBP12.34□□□□□ -0.43
CXCL12-203ENST00000374429 SFPQP23246 707 aaKnown RBP eCLIP12.34□□□□□ -0.43
CXCL12-203ENST00000374429 RBM26Q5T8P6 1007 aaKnown RBP12.34□□□□□ -0.43
CXCL12-203ENST00000374429 BIN2Q9UBW5 565 aaPredicted RBP12.34□□□□□ -0.43
CXCL12-203ENST00000374429 SCN11AQ9UI33 1791 aa12.34□□□□□ -0.43
CXCL12-203ENST00000374429 MMP1P03956 469 aa12.33□□□□□ -0.43
CXCL12-203ENST00000374429 KRT2P35908 639 aa12.33□□□□□ -0.43
CXCL12-203ENST00000374429 NTRK3Q16288 839 aa12.33□□□□□ -0.43
CXCL12-203ENST00000374429 WASF1Q92558 559 aa12.33□□□□□ -0.43
CXCL12-203ENST00000374429 RIOK1Q9BRS2 568 aaKnown RBP12.33□□□□□ -0.43
CXCL12-203ENST00000374429 SAMSN1Q9NSI8 373 aaKnown RBP12.33□□□□□ -0.43
CXCL12-203ENST00000374429 TTF2Q9UNY4 1162 aaKnown RBP12.33□□□□□ -0.43
CXCL12-203ENST00000374429 ALS2Q96Q42 1657 aa12.33□□□□□ -0.44
CXCL12-203ENST00000374429 BAG3O95817 575 aa12.33□□□□□ -0.44
CXCL12-203ENST00000374429 TOB1P50616 345 aaPredicted RBP12.33□□□□□ -0.44
CXCL12-203ENST00000374429 DESI2Q9BSY9 194 aa12.33□□□□□ -0.44
CXCL12-203ENST00000374429 TRIM34Q9BYJ4 488 aa12.33□□□□□ -0.44
CXCL12-203ENST00000374429 NFE2L3Q9Y4A8 694 aa12.33□□□□□ -0.44
CXCL12-203ENST00000374429 KIF1AQ12756 1690 aa12.33□□□□□ -0.44
CXCL12-203ENST00000374429 TAF1P21675 1872 aa12.33□□□□□ -0.44
CXCL12-203ENST00000374429 FMNL1O95466 1100 aaPredicted RBP12.33□□□□□ -0.44
CXCL12-203ENST00000374429 NAPAP54920 295 aa12.33□□□□□ -0.44
CXCL12-203ENST00000374429 KARSQ15046 597 aaKnown RBP12.33□□□□□ -0.44
CXCL12-203ENST00000374429 ZNF804AQ7Z570 1209 aa12.33□□□□□ -0.44
CXCL12-203ENST00000374429 FOXP4Q8IVH2 680 aaPredicted RBP12.33□□□□□ -0.44
CXCL12-203ENST00000374429 DHX40Q8IX18 779 aaKnown RBP12.33□□□□□ -0.44
CXCL12-203ENST00000374429 SYMPKQ92797 1274 aaKnown RBP12.33□□□□□ -0.44
CXCL12-203ENST00000374429 COA7Q96BR5 231 aa12.33□□□□□ -0.44
CXCL12-203ENST00000374429 THRAP3Q9Y2W1 955 aaKnown RBP12.33□□□□□ -0.44
CXCL12-203ENST00000374429 IFNAR1P17181 557 aa12.32□□□□□ -0.44
CXCL12-203ENST00000374429 FANCCQ00597 558 aa12.32□□□□□ -0.44
CXCL12-203ENST00000374429 SHROOM1Q2M3G4 852 aaPredicted RBP12.32□□□□□ -0.44
CXCL12-203ENST00000374429 AXDND1Q5T1B0 1012 aaPredicted RBP12.32□□□□□ -0.44
CXCL12-203ENST00000374429 TAF3Q5VWG9 929 aa12.32□□□□□ -0.44
CXCL12-203ENST00000374429 SPICE1Q8N0Z3 855 aa12.32□□□□□ -0.44
CXCL12-203ENST00000374429 CTAGE5O15320 804 aa12.32□□□□□ -0.44
CXCL12-203ENST00000374429 IDEP14735 1019 aa12.32□□□□□ -0.44
CXCL12-203ENST00000374429 CHRNA5P30532 468 aa12.32□□□□□ -0.44
CXCL12-203ENST00000374429 CLEC4GQ6UXB4 293 aa12.32□□□□□ -0.44
CXCL12-203ENST00000374429 ENGASEQ8NFI3 743 aa12.32□□□□□ -0.44
CXCL12-203ENST00000374429 NOC3LQ8WTT2 800 aaKnown RBP12.32□□□□□ -0.44
CXCL12-203ENST00000374429 AGXT2Q9BYV1 514 aa12.32□□□□□ -0.44
CXCL12-203ENST00000374429 ANKRD2Q9GZV1 360 aa12.32□□□□□ -0.44
CXCL12-203ENST00000374429 VPS16Q9H269 839 aa12.32□□□□□ -0.44
CXCL12-203ENST00000374429 TOP1P11387 765 aaKnown RBP12.32□□□□□ -0.44
CXCL12-203ENST00000374429 STAG1Q8WVM7 1258 aa12.32□□□□□ -0.44
CXCL12-203ENST00000374429 EYA3Q99504 573 aa12.32□□□□□ -0.44
CXCL12-203ENST00000374429 HINFPQ9BQA5 517 aa12.32□□□□□ -0.44
CXCL12-203ENST00000374429 POLR3EQ9NVU0 708 aa12.32□□□□□ -0.44
CXCL12-203ENST00000374429 MMP10P09238 476 aa12.31□□□□□ -0.44
CXCL12-203ENST00000374429 CMA1P23946 247 aa12.31□□□□□ -0.44
CXCL12-203ENST00000374429 IQCB1Q15051 598 aa12.31□□□□□ -0.44
CXCL12-203ENST00000374429 PTPN14Q15678 1187 aa12.31□□□□□ -0.44
CXCL12-203ENST00000374429 RRAGBQ5VZM2 374 aa12.31□□□□□ -0.44
CXCL12-203ENST00000374429 KCTD1Q719H9 257 aa12.31□□□□□ -0.44
CXCL12-203ENST00000374429 YEATS4O95619 227 aa12.31□□□□□ -0.44
CXCL12-203ENST00000374429 TNNI2P48788 182 aa12.31□□□□□ -0.44
CXCL12-203ENST00000374429 TTC38Q5R3I4 469 aa12.31□□□□□ -0.44
CXCL12-203ENST00000374429 SYT10Q6XYQ8 523 aa12.31□□□□□ -0.44
CXCL12-203ENST00000374429 METTL16Q86W50 562 aaKnown RBP12.31□□□□□ -0.44
CXCL12-203ENST00000374429 RGS22Q8NE09 1264 aa12.31□□□□□ -0.44
CXCL12-203ENST00000374429 HPS3Q969F9 1004 aa12.31□□□□□ -0.44
CXCL12-203ENST00000374429 ALDH8A1Q9H2A2 487 aaPredicted RBP12.31□□□□□ -0.44
CXCL12-203ENST00000374429 POLLQ9UGP5 575 aa12.31□□□□□ -0.44
CXCL12-203ENST00000374429 PHRF1Q9P1Y6 1649 aaKnown RBP12.31□□□□□ -0.44
CXCL12-203ENST00000374429 TXKP42681 527 aa12.31□□□□□ -0.44
CXCL12-203ENST00000374429 LIFRP42702 1097 aa12.31□□□□□ -0.44
CXCL12-203ENST00000374429 POSTNQ15063 836 aa12.31□□□□□ -0.44
CXCL12-203ENST00000374429 DPP8Q6V1X1 898 aaPredicted RBP12.31□□□□□ -0.44
CXCL12-203ENST00000374429 TMTC2Q8N394 836 aa12.31□□□□□ -0.44
CXCL12-203ENST00000374429 CD209Q9NNX6 404 aa12.31□□□□□ -0.44
CXCL12-203ENST00000374429 RNF216Q9NWF9 866 aaPredicted RBP12.31□□□□□ -0.44
CXCL12-203ENST00000374429 SALL1Q9NSC2 1324 aa12.3□□□□□ -0.44
CXCL12-203ENST00000374429 KLRF2D3W0D1 207 aa12.3□□□□□ -0.44
CXCL12-203ENST00000374429 SF3B3Q15393 1217 aaKnown RBP12.3□□□□□ -0.44
CXCL12-203ENST00000374429 VPS72Q15906 364 aa12.3□□□□□ -0.44
CXCL12-203ENST00000374429 KIAA1524Q8TCG1 905 aa12.3□□□□□ -0.44
CXCL12-203ENST00000374429 IL17RAQ96F46 866 aa12.3□□□□□ -0.44
CXCL12-203ENST00000374429 ZNF142P52746 1687 aaPredicted RBP12.3□□□□□ -0.44
CXCL12-203ENST00000374429 NRDCO43847 1150 aa12.3□□□□□ -0.44
CXCL12-203ENST00000374429 ZNF500O60304 480 aaPredicted RBP12.3□□□□□ -0.44
CXCL12-203ENST00000374429 CCNT1O60563 726 aaKnown RBP12.3□□□□□ -0.44
CXCL12-203ENST00000374429 SOGA3Q5TF21 947 aa12.3□□□□□ -0.44
CXCL12-203ENST00000374429 KRBA2Q6ZNG9 492 aa12.3□□□□□ -0.44
CXCL12-203ENST00000374429 CCDC112Q8NEF3 446 aa12.3□□□□□ -0.44
CXCL12-203ENST00000374429 LZTFL1Q9NQ48 299 aa12.3□□□□□ -0.44
CXCL12-203ENST00000374429 TBC1D7Q9P0N9 293 aa12.3□□□□□ -0.44
CXCL12-203ENST00000374429 ARFGEF2Q9Y6D5 1785 aa12.29□□□□□ -0.44
CXCL12-203ENST00000374429 DYNC1I1O14576 645 aa12.29□□□□□ -0.44
CXCL12-203ENST00000374429 CCDC178Q5BJE1 867 aa12.29□□□□□ -0.44
CXCL12-203ENST00000374429 LRRC8AQ8IWT6 810 aa12.29□□□□□ -0.44
CXCL12-203ENST00000374429 DNAI1Q9UI46 699 aa12.29□□□□□ -0.44
CXCL12-203ENST00000374429 GDF11O95390 407 aa12.29□□□□□ -0.44
CXCL12-203ENST00000374429 UBA7P41226 1012 aa12.29□□□□□ -0.44
CXCL12-203ENST00000374429 DNA2P51530 1060 aa12.29□□□□□ -0.44
CXCL12-203ENST00000374429 GRAPQ13588 217 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms