RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 PDE8AO60658 829 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 ATP1A3P13637 1013 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 PFKFB1P16118 471 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 IGBP1P78318 339 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 GOLGA8FQ08AF8 430 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 GOLGA8DPQ0D2H9 430 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 ITPK1Q13572 414 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 KRT40Q6A162 431 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 ADALQ6DHV7 355 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 SPATA5Q8NB90 893 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 IGDCC4Q8TDY8 1250 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 SDR42E1Q8WUS8 393 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 PIK3R5Q8WYR1 880 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 AIDAQ96BJ3 306 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 PIF1Q9H611 641 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 LY9Q9HBG7 655 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 TOMM22Q9NS69 142 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 KCNJ14Q9UNX9 436 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 PLEKHG2Q9H7P9 1386 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 PHLPP1O60346 1717 aa7.38□□□□□ -1.23
CHD6-202ENST00000373222 DISP2A7MBM2 1401 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 CCDC194A0A1B0GVG4 234 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 BECN2A8MW95 431 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 GPR37L1O60883 481 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 ZNF202O95125 648 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 FGFR2P21802 821 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 NTRK3Q16288 839 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 SLC4A8Q2Y0W8 1093 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 INTS5Q6P9B9 1019 aaKnown RBP7.37□□□□□ -1.23
CHD6-202ENST00000373222 NFXL1Q6ZNB6 911 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 PTF1AQ7RTS3 328 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 ZNF34Q8IZ26 560 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 IFNL3Q8IZI9 196 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 CHMP4CQ96CF2 233 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.37□□□□□ -1.232e-7■□□□□ 10.3
CHD6-202ENST00000373222 ZMIZ1Q9ULJ6 1067 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 COL16A1Q07092 1604 aaPredicted RBP7.37□□□□□ -1.23
CHD6-202ENST00000373222 GSG1L2A8MUP6 293 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 GOLGA6L6A8MZA4 724 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 EXOC5O00471 708 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 ARID4AP29374 1257 aaPredicted RBP7.37□□□□□ -1.23
CHD6-202ENST00000373222 CRKLP46109 303 aaKnown RBP7.37□□□□□ -1.23
CHD6-202ENST00000373222 PTPN5P54829 565 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 PNOCQ13519 176 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 PUM3Q15397 648 aaKnown RBP7.37□□□□□ -1.23
CHD6-202ENST00000373222 TMEM67Q5HYA8 995 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 ANO1Q5XXA6 986 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 SHC4Q6S5L8 630 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 LRRC8AQ8IWT6 810 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 SHISA4Q96DD7 197 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 SLC26A6Q9BXS9 759 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 KIAA1468Q9P260 1216 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.37□□□□□ -1.23
CHD6-202ENST00000373222 FAN1Q9Y2M0 1017 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 V9GYY5 206 aaPredicted RBP7.37□□□□□ -1.23
CHD6-202ENST00000373222 ZMYM6O95789 1325 aa7.37□□□□□ -1.23
CHD6-202ENST00000373222 SOCS7O14512 581 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 ATP2B1P20020 1258 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 ATP6V1AP38606 617 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 GYG1P46976 350 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 HDLBPQ00341 1268 aaKnown RBP7.36□□□□□ -1.23
CHD6-202ENST00000373222 TRDNQ13061 729 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 NR5A1Q13285 461 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 NME8Q8N427 588 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 FBXL16Q8N461 479 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 PMM1Q92871 262 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 TEX13AQ9BXU3 409 aaPredicted RBP7.36□□□□□ -1.23
CHD6-202ENST00000373222 HSD3B7Q9H2F3 369 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 ALG2Q9H553 416 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 CUEDC1Q9NWM3 386 aaPredicted RBP7.36□□□□□ -1.23
CHD6-202ENST00000373222 JAG2Q9Y219 1238 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 MAFBQ9Y5Q3 323 aaPredicted RBP7.36□□□□□ -1.23
CHD6-202ENST00000373222 ARAP2Q8WZ64 1704 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 CCDC69A6NI79 296 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 GOLGA8AA7E2F4 631 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 BTBD18B2RXH4 712 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 IFIT3O14879 490 aaKnown RBP7.36□□□□□ -1.23
CHD6-202ENST00000373222 ZBTB43O43298 467 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 PPFIA4O75335 1185 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 PRDM1O75626 825 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 ATRNO75882 1429 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 KLRK1P26718 216 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 EIF5P55010 431 aaKnown RBP7.36□□□□□ -1.23
CHD6-202ENST00000373222 CCZ1BP86790 482 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 CCZ1P86791 482 aaPredicted RBP7.36□□□□□ -1.23
CHD6-202ENST00000373222 VAC14Q08AM6 782 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 PTPAQ15257 358 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 UBE3CQ15386 1083 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 SYNE3Q6ZMZ3 975 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 BICDL1Q6ZP65 573 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 FOXP4Q8IVH2 680 aaPredicted RBP7.36□□□□□ -1.23
CHD6-202ENST00000373222 GRAMD1CQ8IYS0 662 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 GPATCH11Q8N954 259 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 LPIN2Q92539 896 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 DPF2Q92785 391 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 MPHOSPH8Q99549 860 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 XPO4Q9C0E2 1151 aaKnown RBP7.36□□□□□ -1.23
CHD6-202ENST00000373222 NAPBQ9H115 298 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 PRM3Q9NNZ6 103 aa7.36□□□□□ -1.23
CHD6-202ENST00000373222 IFNKQ9P0W0 207 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms