RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 FKBP1AP62942 108 aaKnown RBP28.86■■■□□ 2.21
CTSA-203ENST00000372459 SLC39A14Q15043 492 aa28.86■■■□□ 2.21
CTSA-203ENST00000372459 PKN1Q16512 942 aa28.86■■■□□ 2.21
CTSA-203ENST00000372459 RBM43Q6ZSC3 357 aaKnown RBP28.86■■■□□ 2.21
CTSA-203ENST00000372459 DEFB132Q7Z7B7 95 aa28.86■■■□□ 2.21
CTSA-203ENST00000372459 TEKT1Q969V4 418 aa28.86■■■□□ 2.21
CTSA-203ENST00000372459 GOLPH3LQ9H4A5 285 aa28.86■■■□□ 2.21
CTSA-203ENST00000372459 V9GY48 417 aaPredicted RBP28.86■■■□□ 2.21
CTSA-203ENST00000372459 USP17L3A6NCW0 530 aa28.86■■■□□ 2.21
CTSA-203ENST00000372459 USP17L4A6NCW7 530 aa28.86■■■□□ 2.21
CTSA-203ENST00000372459 BTBD18B2RXH4 712 aa28.86■■■□□ 2.21
CTSA-203ENST00000372459 STRIP1Q5VSL9 837 aa28.86■■■□□ 2.21
CTSA-203ENST00000372459 USP17L1Q7RTZ2 530 aa28.86■■■□□ 2.21
CTSA-203ENST00000372459 FSIP1Q8NA03 581 aa28.86■■■□□ 2.21
CTSA-203ENST00000372459 PNMA1Q8ND90 353 aa28.86■■■□□ 2.21
CTSA-203ENST00000372459 MRPS27Q92552 414 aaKnown RBP28.86■■■□□ 2.21
CTSA-203ENST00000372459 ECE2O60344 883 aa28.85■■■□□ 2.21
CTSA-203ENST00000372459 SCNN1DP51172 638 aa28.85■■■□□ 2.21
CTSA-203ENST00000372459 FAM160A1Q05DH4 1040 aa28.85■■■□□ 2.21
CTSA-203ENST00000372459 CNTNAP5Q8WYK1 1306 aa28.85■■■□□ 2.21
CTSA-203ENST00000372459 SRBD1Q8N5C6 995 aaKnown RBP28.84■■■□□ 2.21
CTSA-203ENST00000372459 USP40Q9NVE5 1235 aa28.84■■■□□ 2.21
CTSA-203ENST00000372459 PICALMQ13492 652 aa28.84■■■□□ 2.21
CTSA-203ENST00000372459 UVSSAQ2YD98 709 aa28.84■■■□□ 2.21
CTSA-203ENST00000372459 SUPT20HQ8NEM7 779 aa28.84■■■□□ 2.21
CTSA-203ENST00000372459 SNED1Q8TER0 1413 aa28.83■■■□□ 2.21
CTSA-203ENST00000372459 SNW1Q13573 536 aaKnown RBP28.83■■■□□ 2.21
CTSA-203ENST00000372459 JMYQ8N9B5 988 aa28.83■■■□□ 2.21
CTSA-203ENST00000372459 ENGASEQ8NFI3 743 aa28.83■■■□□ 2.21
CTSA-203ENST00000372459 PDGFDQ9GZP0 370 aaPredicted RBP28.83■■■□□ 2.21
CTSA-203ENST00000372459 C10orf71Q711Q0 1435 aa28.83■■■□□ 2.21
CTSA-203ENST00000372459 CTAGE5O15320 804 aa28.82■■■□□ 2.2
CTSA-203ENST00000372459 PPP6R2O75170 966 aa28.82■■■□□ 2.2
CTSA-203ENST00000372459 CKAP2LQ8IYA6 745 aa28.82■■■□□ 2.2
CTSA-203ENST00000372459 NEDD1Q8NHV4 660 aa28.82■■■□□ 2.2
CTSA-203ENST00000372459 MRIQ9BWK5 157 aa28.82■■■□□ 2.2
CTSA-203ENST00000372459 KCNQ5Q9NR82 932 aa28.82■■■□□ 2.2
CTSA-203ENST00000372459 KINO60870 393 aaKnown RBP28.82■■■□□ 2.2
CTSA-203ENST00000372459 WDHD1O75717 1129 aaPredicted RBP28.82■■■□□ 2.2
CTSA-203ENST00000372459 VPS54Q9P1Q0 977 aa28.82■■■□□ 2.2
CTSA-203ENST00000372459 PHF20Q9BVI0 1012 aa28.81■■■□□ 2.2
CTSA-203ENST00000372459 STX8Q9UNK0 236 aa28.81■■■□□ 2.2
CTSA-203ENST00000372459 CRKP46108 304 aa28.81■■■□□ 2.2
CTSA-203ENST00000372459 KIAA2012Q0VF49 1180 aa28.81■■■□□ 2.2
CTSA-203ENST00000372459 PTPAQ15257 358 aa28.81■■■□□ 2.2
CTSA-203ENST00000372459 RILPL1Q5EBL4 403 aa28.81■■■□□ 2.2
CTSA-203ENST00000372459 DACT2Q5SW24 774 aa28.81■■■□□ 2.2
CTSA-203ENST00000372459 SLC16A10Q8TF71 515 aa28.81■■■□□ 2.2
CTSA-203ENST00000372459 hCG_1642624A0A1W2PR95 340 aa28.8■■■□□ 2.2
CTSA-203ENST00000372459 GNAQP50148 359 aa28.8■■■□□ 2.2
CTSA-203ENST00000372459 TYRO3Q06418 890 aa28.8■■■□□ 2.2
CTSA-203ENST00000372459 GRM4Q14833 912 aa28.8■■■□□ 2.2
CTSA-203ENST00000372459 AOC3Q16853 763 aa28.8■■■□□ 2.2
CTSA-203ENST00000372459 APOBEC3HQ6NTF7 200 aaKnown RBP28.8■■■□□ 2.2
CTSA-203ENST00000372459 CDC42EP5Q6NZY7 148 aa28.8■■■□□ 2.2
CTSA-203ENST00000372459 ZDHHC15Q96MV8 337 aa28.8■■■□□ 2.2
CTSA-203ENST00000372459 DDX4Q9NQI0 724 aaKnown RBP28.8■■■□□ 2.2
CTSA-203ENST00000372459 GRIPAP1Q4V328 841 aa28.79■■■□□ 2.2
CTSA-203ENST00000372459 TMEM47Q9BQJ4 181 aa28.79■■■□□ 2.2
CTSA-203ENST00000372459 KRT2P35908 639 aa28.79■■■□□ 2.2
CTSA-203ENST00000372459 HDLBPQ00341 1268 aaKnown RBP28.79■■■□□ 2.2
CTSA-203ENST00000372459 NR5A1Q13285 461 aa28.79■■■□□ 2.2
CTSA-203ENST00000372459 AXDND1Q5T1B0 1012 aaPredicted RBP28.79■■■□□ 2.2
CTSA-203ENST00000372459 FMR1NBQ8N0W7 255 aaPredicted RBP28.79■■■□□ 2.2
CTSA-203ENST00000372459 BRMS1Q9HCU9 246 aa28.79■■■□□ 2.2
CTSA-203ENST00000372459 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.79■■■□□ 2.2
CTSA-203ENST00000372459 MARCKSP29966 332 aaPredicted RBP28.78■■■□□ 2.2
CTSA-203ENST00000372459 SASS6Q6UVJ0 657 aa28.78■■■□□ 2.2
CTSA-203ENST00000372459 KIAA0825Q8IV33 1275 aa28.78■■■□□ 2.2
CTSA-203ENST00000372459 SHISA4Q96DD7 197 aa28.78■■■□□ 2.2
CTSA-203ENST00000372459 ADAMTSL1Q8N6G6 1762 aa28.78■■■□□ 2.2
CTSA-203ENST00000372459 SCN9AQ15858 1988 aa28.77■■■□□ 2.2
CTSA-203ENST00000372459 A0A1B0GVL5 298 aa28.77■■■□□ 2.2
CTSA-203ENST00000372459 C21orf2O43822 256 aa28.77■■■□□ 2.2
CTSA-203ENST00000372459 SCG2P13521 617 aa28.77■■■□□ 2.2
CTSA-203ENST00000372459 CMA1P23946 247 aa28.77■■■□□ 2.2
CTSA-203ENST00000372459 GABPAQ06546 454 aa28.77■■■□□ 2.2
CTSA-203ENST00000372459 TTLL6Q8N841 843 aa28.77■■■□□ 2.2
CTSA-203ENST00000372459 OXER1Q8TDS5 423 aa28.77■■■□□ 2.2
CTSA-203ENST00000372459 OSBPL5Q9H0X9 879 aaPredicted RBP28.77■■■□□ 2.2
CTSA-203ENST00000372459 PFKFB3Q16875 520 aaPredicted RBP28.77■■■□□ 2.2
CTSA-203ENST00000372459 PDLIM2Q96JY6 352 aa28.77■■■□□ 2.2
CTSA-203ENST00000372459 MAD2L2Q9UI95 211 aa28.77■■■□□ 2.2
CTSA-203ENST00000372459 MRVI1Q9Y6F6 885 aa28.77■■■□□ 2.2
CTSA-203ENST00000372459 NDUFA8P51970 172 aa28.76■■■□□ 2.19
CTSA-203ENST00000372459 TOB1P50616 345 aaPredicted RBP28.75■■■□□ 2.19
CTSA-203ENST00000372459 SWAP70Q9UH65 585 aa28.75■■■□□ 2.19
CTSA-203ENST00000372459 ZNF646O15015 1829 aaPredicted RBP28.75■■■□□ 2.19
CTSA-203ENST00000372459 PLIN4Q96Q06 1357 aa28.75■■■□□ 2.19
CTSA-203ENST00000372459 PPIP5K2O43314 1243 aa28.75■■■□□ 2.19
CTSA-203ENST00000372459 SERPINB13Q9UIV8 391 aa28.75■■■□□ 2.19
CTSA-203ENST00000372459 HLA-DOAP06340 250 aa28.74■■■□□ 2.19
CTSA-203ENST00000372459 CCDC93Q567U6 631 aa28.74■■■□□ 2.19
CTSA-203ENST00000372459 STAG2Q8N3U4 1231 aa28.74■■■□□ 2.19
CTSA-203ENST00000372459 CABP5Q9NP86 173 aa28.74■■■□□ 2.19
CTSA-203ENST00000372459 TOP1P11387 765 aaKnown RBP28.73■■■□□ 2.19
CTSA-203ENST00000372459 NOVP48745 357 aa28.73■■■□□ 2.19
CTSA-203ENST00000372459 HS1BP3Q53T59 392 aa28.73■■■□□ 2.19
CTSA-203ENST00000372459 RTKN2Q8IZC4 609 aa28.73■■■□□ 2.19
CTSA-203ENST00000372459 FAM200AQ8TCP9 573 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms