RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 USP6P35125 1406 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 ZNF804BA4D1E1 1349 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 DCAF15Q66K64 600 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 EPSTI1Q96J88 318 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 NOC4LQ9BVI4 516 aaKnown RBP10.93□□□□□ -0.66
COL4A6-202ENST00000372216 HGSO14964 777 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-202ENST00000372216 ERFEQ4G0M1 354 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 ARHGEF16Q5VV41 709 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 SDR42E1Q8WUS8 393 aa10.93□□□□□ -0.66
COL4A6-202ENST00000372216 BBXQ8WY36 941 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-202ENST00000372216 USP17L12C9JPN9 530 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 USP17L21D6R901 530 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 SERPINB2P05120 415 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 Q3C1V9 767 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 BEND3Q5T5X7 828 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 SULF1Q8IWU6 871 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 IRAK4Q9NWZ3 460 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 ANAPC4Q9UJX5 808 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 ATP6V0A2Q9Y487 856 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 AFG3L2Q9Y4W6 797 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 KIF22Q14807 665 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 CHURC1Q8WUH1 139 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 ZSCAN10Q96SZ4 725 aaPredicted RBP10.92□□□□□ -0.66
COL4A6-202ENST00000372216 IFNKQ9P0W0 207 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 ERBB4Q15303 1308 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 DNM2P50570 870 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 KIF5AQ12840 1032 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 CERKLQ49MI3 558 aaPredicted RBP10.92□□□□□ -0.66
COL4A6-202ENST00000372216 KIFAP3Q92845 792 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 LRWD1Q9UFC0 647 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 XDHP47989 1333 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 KARSQ15046 597 aaKnown RBP10.92□□□□□ -0.66
COL4A6-202ENST00000372216 SLC5A4Q9NY91 659 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 KCNH3Q9ULD8 1083 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 DNM3Q9UQ16 869 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 KSR1Q8IVT5 923 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 MYCT1Q8N699 235 aa10.92□□□□□ -0.66
COL4A6-202ENST00000372216 AATKQ6ZMQ8 1374 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 PPP2R5BQ15173 497 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 SPECC1LQ69YQ0 1117 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 IFNL3Q8IZI9 196 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 LRRC47Q8N1G4 583 aaKnown RBP10.91□□□□□ -0.66
COL4A6-202ENST00000372216 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.91□□□□□ -0.66
COL4A6-202ENST00000372216 VPS54Q9P1Q0 977 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 ZBTB1Q9Y2K1 713 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 PPME1Q9Y570 386 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 RIOK3O14730 519 aaKnown RBP10.91□□□□□ -0.66
COL4A6-202ENST00000372216 SYNMO15061 1565 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 PPP1R2P41236 205 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 NLRX1Q86UT6 975 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 ABCC4O15439 1325 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 TLDC2A0PJX2 215 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 CTAGE15A4D2H0 777 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 POLR2DO15514 142 aaKnown RBP10.91□□□□□ -0.66
COL4A6-202ENST00000372216 CTAGE8P0CG41 777 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 IL6STP40189 918 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-202ENST00000372216 PSMD6Q15008 389 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 PROSER3Q2NL68 480 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 CTAGE6Q86UF2 777 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 CTAGE4Q8IX94 777 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 CFAP57Q96MR6 1250 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 NAP1L3Q99457 506 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-202ENST00000372216 CTAGE9A4FU28 777 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 USP44Q9H0E7 712 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 DNAI1Q9UI46 699 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 SMCO2A6NFE2 343 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 KRT86O43790 486 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 SLC8A3P57103 927 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 IGBP1P78318 339 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 BSPRYQ5W0U4 402 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 DYMQ7RTS9 669 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 SEPT12Q8IYM1 358 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 GUCA1BQ9UMX6 200 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 MAPK8IP1Q9UQF2 711 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 PAXBP1Q9Y5B6 917 aa10.91□□□□□ -0.66
COL4A6-202ENST00000372216 ANKARQ7Z5J8 1434 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 ARAP3Q8WWN8 1544 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 CUTAO60888 179 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 ALAS1P13196 640 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 DIXDC1Q155Q3 683 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 GSDMBQ8TAX9 411 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 SPATA17Q96L03 361 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 ITKQ08881 620 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 KRT40Q6A162 431 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 CABP7Q86V35 215 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 KIF9Q9HAQ2 790 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 KDM6BO15054 1643 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 TESPA1A2RU30 521 aaPredicted RBP10.9□□□□□ -0.66
COL4A6-202ENST00000372216 STX10O60499 249 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 PDE6AP16499 860 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 NAA25Q14CX7 972 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 GOLGA6CA6NDK9 693 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 GOLGA6BA6NDN3 693 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 GOLGA6DP0CG33 693 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 MICALCLQ6ZW33 695 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 NCAPG2Q86XI2 1143 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 CMTR1Q8N1G2 835 aaKnown RBP10.9□□□□□ -0.66
COL4A6-202ENST00000372216 GOLGA6AQ9NYA3 693 aa10.9□□□□□ -0.66
COL4A6-202ENST00000372216 ATF5Q9Y2D1 282 aaPredicted RBP10.9□□□□□ -0.66
COL4A6-202ENST00000372216 LUC7L2Q9Y383 392 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms