RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 CPSF2Q9P2I0 782 aaKnown RBP17.83■□□□□ 0.44
CLSTN1-201ENST00000361311 MRFAP1Q9Y605 127 aa17.83■□□□□ 0.44
CLSTN1-201ENST00000361311 PPP1R2P41236 205 aa17.83■□□□□ 0.44
CLSTN1-201ENST00000361311 COPB1P53618 953 aaKnown RBP17.83■□□□□ 0.44
CLSTN1-201ENST00000361311 KRT71Q3SY84 523 aa17.83■□□□□ 0.44
CLSTN1-201ENST00000361311 DZIP1Q86YF9 867 aaKnown RBP17.83■□□□□ 0.44
CLSTN1-201ENST00000361311 TMEM51Q9NW97 253 aa17.83■□□□□ 0.44
CLSTN1-201ENST00000361311 A0A1W2PRG0 241 aa17.82■□□□□ 0.44
CLSTN1-201ENST00000361311 C2CD5Q86YS7 1000 aa17.82■□□□□ 0.44
CLSTN1-201ENST00000361311 IFT74Q96LB3 600 aa17.82■□□□□ 0.44
CLSTN1-201ENST00000361311 IL25Q9H293 177 aa17.82■□□□□ 0.44
CLSTN1-201ENST00000361311 ADAMTS2O95450 1211 aa17.82■□□□□ 0.44
CLSTN1-201ENST00000361311 ZNF76P36508 570 aa17.82■□□□□ 0.44
CLSTN1-201ENST00000361311 GRAMD1CQ8IYS0 662 aa17.82■□□□□ 0.44
CLSTN1-201ENST00000361311 TSKSQ9UJT2 592 aa17.82■□□□□ 0.44
CLSTN1-201ENST00000361311 CDK12Q9NYV4 1490 aaPredicted RBP17.82■□□□□ 0.44
CLSTN1-201ENST00000361311 CDC42BPAQ5VT25 1732 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 GNAQP50148 359 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 MUM1L1Q5H9M0 696 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 PLBD2Q8NHP8 589 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 MICAL1Q8TDZ2 1067 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 VPS54Q9P1Q0 977 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 MTRF1LQ9UGC7 380 aaKnown RBP17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 ATP10DQ9P241 1426 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 PLA2G4AP47712 749 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 CADPS2Q86UW7 1296 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 FAM207AQ9NSI2 230 aaPredicted RBP17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 FAM169AQ9Y6X4 670 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 LRRIQ1Q96JM4 1722 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 MAP3K4Q9Y6R4 1608 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 PNPLA6Q8IY17 1366 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 CEP104O60308 925 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 GCKP35557 465 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 DNM2P50570 870 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 NEDD9Q14511 834 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 ODF2LQ9ULJ1 636 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 PLEKHG3A1L390 1219 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 SLC9C1Q4G0N8 1177 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 ZMYM1Q5SVZ6 1142 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 KCNK9Q9NPC2 374 aa17.81■□□□□ 0.44
CLSTN1-201ENST00000361311 hCG_1642624A0A1W2PR95 340 aa17.8■□□□□ 0.44
CLSTN1-201ENST00000361311 MAP3K9P80192 1104 aa17.8■□□□□ 0.44
CLSTN1-201ENST00000361311 TRIM31Q9BZY9 425 aa17.8■□□□□ 0.44
CLSTN1-201ENST00000361311 L2HGDHQ9H9P8 463 aa17.8■□□□□ 0.44
CLSTN1-201ENST00000361311 RBM28Q9NW13 759 aaKnown RBP17.8■□□□□ 0.44
CLSTN1-201ENST00000361311 RIPOR2Q9Y4F9 1068 aa17.8■□□□□ 0.44
CLSTN1-201ENST00000361311 COBLO75128 1261 aa17.8■□□□□ 0.44
CLSTN1-201ENST00000361311 H2AFXP16104 143 aaPredicted RBP17.8■□□□□ 0.44
CLSTN1-201ENST00000361311 CTDSPL2Q05D32 466 aa17.8■□□□□ 0.44
CLSTN1-201ENST00000361311 PPP1R7Q15435 360 aa17.8■□□□□ 0.44
CLSTN1-201ENST00000361311 SNCBQ16143 134 aa17.8■□□□□ 0.44
CLSTN1-201ENST00000361311 CCDC25Q86WR0 208 aa17.8■□□□□ 0.44
CLSTN1-201ENST00000361311 LRRC7Q96NW7 1537 aa17.8■□□□□ 0.44
CLSTN1-201ENST00000361311 H7C1D1 291 aa17.8■□□□□ 0.44
CLSTN1-201ENST00000361311 NBPF6Q5VWK0 638 aa17.8■□□□□ 0.44
CLSTN1-201ENST00000361311 SMYD4Q8IYR2 804 aaPredicted RBP17.8■□□□□ 0.44
CLSTN1-201ENST00000361311 NBPF4Q96M43 638 aa17.8■□□□□ 0.44
CLSTN1-201ENST00000361311 CTDP1Q9Y5B0 961 aaPredicted RBP17.8■□□□□ 0.44
CLSTN1-201ENST00000361311 TRAF5O00463 557 aa17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 SLC8A1P32418 973 aa17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 PROSER3Q2NL68 480 aa17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 GSDMAQ96QA5 445 aa17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 GJB4Q9NTQ9 266 aa17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 CTNNA1P35221 906 aaKnown RBP17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 PRPHP41219 470 aa17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 NAPAP54920 295 aa17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 ATP11AP98196 1134 aa17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 LRCH2Q5VUJ6 765 aa17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 CCDC84Q86UT8 332 aaPredicted RBP17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 ARMT1Q9H993 441 aa17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 FHOD1Q9Y613 1164 aa17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 ATP7BP35670 1465 aa17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 E9PCH4 1651 aa17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 APBA1Q02410 837 aa17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 GKAP1Q5VSY0 366 aaPredicted RBP17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 RRAGAQ7L523 313 aa17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 CMTR1Q8N1G2 835 aaKnown RBP17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 KIF1BO60333 1816 aa17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 ERCC3P19447 782 aa17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 PCK1P35558 622 aa17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 EPHB4P54760 987 aa17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 CRNKL1Q9BZJ0 848 aaKnown RBP17.79■□□□□ 0.44
CLSTN1-201ENST00000361311 CCDC77Q9BR77 488 aa17.78■□□□□ 0.44
CLSTN1-201ENST00000361311 MYO5CQ9NQX4 1742 aa17.78■□□□□ 0.44
CLSTN1-201ENST00000361311 PREX2Q70Z35 1606 aa17.78■□□□□ 0.44
CLSTN1-201ENST00000361311 CLTCL1P53675 1640 aa17.78■□□□□ 0.44
CLSTN1-201ENST00000361311 MAGEB6P1A0A0J9YX57 407 aa17.78■□□□□ 0.44
CLSTN1-201ENST00000361311 CETN1Q12798 172 aa17.78■□□□□ 0.44
CLSTN1-201ENST00000361311 E2F5Q15329 346 aa17.78■□□□□ 0.44
CLSTN1-201ENST00000361311 KRT79Q5XKE5 535 aa17.78■□□□□ 0.44
CLSTN1-201ENST00000361311 CNNM4Q6P4Q7 775 aa17.78■□□□□ 0.44
CLSTN1-201ENST00000361311 HOOK3Q86VS8 718 aa17.78■□□□□ 0.44
CLSTN1-201ENST00000361311 AIFM3Q96NN9 605 aa17.78■□□□□ 0.44
CLSTN1-201ENST00000361311 CSRNP2Q9H175 543 aa17.78■□□□□ 0.44
CLSTN1-201ENST00000361311 GPHNQ9NQX3 736 aaPredicted RBP17.78■□□□□ 0.44
CLSTN1-201ENST00000361311 CROCC2H7BZ55 1655 aa17.78■□□□□ 0.44
CLSTN1-201ENST00000361311 MAST3O60307 1309 aa17.78■□□□□ 0.44
CLSTN1-201ENST00000361311 MTMR3Q13615 1198 aa17.78■□□□□ 0.44
CLSTN1-201ENST00000361311 SETDB1Q15047 1291 aa17.78■□□□□ 0.44
CLSTN1-201ENST00000361311 UNC13BO14795 1591 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms