RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 FDPSP14324 419 aaKnown RBP23.41■■□□□ 1.34
CBWD3-201ENST00000360171 SLC4A8Q2Y0W8 1093 aa23.41■■□□□ 1.34
CBWD3-201ENST00000360171 IGDCC4Q8TDY8 1250 aa23.41■■□□□ 1.34
CBWD3-201ENST00000360171 BPIFA3Q9BQP9 254 aa23.41■■□□□ 1.34
CBWD3-201ENST00000360171 ANGEL1Q9UNK9 670 aaKnown RBP23.41■■□□□ 1.34
CBWD3-201ENST00000360171 CERS3Q8IU89 383 aa23.4■■□□□ 1.34
CBWD3-201ENST00000360171 MAPKAPK5Q8IW41 473 aa23.4■■□□□ 1.34
CBWD3-201ENST00000360171 CCDC112Q8NEF3 446 aa23.4■■□□□ 1.34
CBWD3-201ENST00000360171 TMEM87BQ96K49 555 aa23.4■■□□□ 1.34
CBWD3-201ENST00000360171 ZNF277Q9NRM2 450 aaPredicted RBP23.4■■□□□ 1.34
CBWD3-201ENST00000360171 NAP1L2Q9ULW6 460 aaPredicted RBP23.4■■□□□ 1.34
CBWD3-201ENST00000360171 PCDHA7Q9UN72 937 aa23.4■■□□□ 1.34
CBWD3-201ENST00000360171 KLF18A0A0U1RQI7 1052 aa23.4■■□□□ 1.34
CBWD3-201ENST00000360171 USP17L3A6NCW0 530 aa23.4■■□□□ 1.34
CBWD3-201ENST00000360171 USP17L4A6NCW7 530 aa23.4■■□□□ 1.34
CBWD3-201ENST00000360171 DHX16O60231 1041 aaKnown RBP23.4■■□□□ 1.34
CBWD3-201ENST00000360171 FGRP09769 529 aa23.4■■□□□ 1.34
CBWD3-201ENST00000360171 GSDMDP57764 484 aa23.4■■□□□ 1.34
CBWD3-201ENST00000360171 USP17L1Q7RTZ2 530 aa23.4■■□□□ 1.34
CBWD3-201ENST00000360171 TEX11Q8IYF3 940 aa23.4■■□□□ 1.34
CBWD3-201ENST00000360171 KCNG4Q8TDN1 519 aa23.4■■□□□ 1.34
CBWD3-201ENST00000360171 POLR3EQ9NVU0 708 aa23.4■■□□□ 1.34
CBWD3-201ENST00000360171 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.4■■□□□ 1.34
CBWD3-201ENST00000360171 FKBP1AP62942 108 aaKnown RBP23.39■■□□□ 1.33
CBWD3-201ENST00000360171 NYAP1Q6ZVC0 841 aa23.39■■□□□ 1.33
CBWD3-201ENST00000360171 LINC00301Q8NCQ3 95 aa23.39■■□□□ 1.33
CBWD3-201ENST00000360171 LY9Q9HBG7 655 aa23.39■■□□□ 1.33
CBWD3-201ENST00000360171 IMPACTQ9P2X3 320 aa23.39■■□□□ 1.33
CBWD3-201ENST00000360171 PLCG2P16885 1265 aa23.38■■□□□ 1.33
CBWD3-201ENST00000360171 ZSCAN20P17040 1043 aaPredicted RBP23.38■■□□□ 1.33
CBWD3-201ENST00000360171 DMTNQ08495 405 aa23.38■■□□□ 1.33
CBWD3-201ENST00000360171 DHX8Q14562 1220 aaKnown RBP23.38■■□□□ 1.33
CBWD3-201ENST00000360171 DALRD3Q5D0E6 543 aaKnown RBP23.38■■□□□ 1.33
CBWD3-201ENST00000360171 BRAPQ7Z569 592 aa23.38■■□□□ 1.33
CBWD3-201ENST00000360171 HPS5Q9UPZ3 1129 aa23.38■■□□□ 1.33
CBWD3-201ENST00000360171 PRDM1O75626 825 aa23.38■■□□□ 1.33
CBWD3-201ENST00000360171 C12orf60Q5U649 245 aa23.38■■□□□ 1.33
CBWD3-201ENST00000360171 CEP135Q66GS9 1140 aa23.38■■□□□ 1.33
CBWD3-201ENST00000360171 RAB11FIP4Q86YS3 637 aa23.38■■□□□ 1.33
CBWD3-201ENST00000360171 KIAA0825Q8IV33 1275 aa23.38■■□□□ 1.33
CBWD3-201ENST00000360171 ZKSCAN3Q9BRR0 538 aa23.38■■□□□ 1.33
CBWD3-201ENST00000360171 OSBPL5Q9H0X9 879 aaPredicted RBP23.38■■□□□ 1.33
CBWD3-201ENST00000360171 CD2APQ9Y5K6 639 aa23.38■■□□□ 1.33
CBWD3-201ENST00000360171 GOLGA8BA8MQT2 603 aa23.37■■□□□ 1.33
CBWD3-201ENST00000360171 CCZ1BP86790 482 aa23.37■■□□□ 1.33
CBWD3-201ENST00000360171 CCZ1P86791 482 aaPredicted RBP23.37■■□□□ 1.33
CBWD3-201ENST00000360171 TMEM67Q5HYA8 995 aa23.37■■□□□ 1.33
CBWD3-201ENST00000360171 FLT1P17948 1338 aa23.37■■□□□ 1.33
CBWD3-201ENST00000360171 SKILP12757 684 aa23.37■■□□□ 1.33
CBWD3-201ENST00000360171 FOSBP53539 338 aa23.37■■□□□ 1.33
CBWD3-201ENST00000360171 SAP30BPQ9UHR5 308 aaKnown RBP23.37■■□□□ 1.33
CBWD3-201ENST00000360171 ROBO3Q96MS0 1386 aa23.36■■□□□ 1.33
CBWD3-201ENST00000360171 IFIT3O14879 490 aaKnown RBP23.36■■□□□ 1.33
CBWD3-201ENST00000360171 SOGA3Q5TF21 947 aa23.36■■□□□ 1.33
CBWD3-201ENST00000360171 LARGE2Q8N3Y3 721 aa23.36■■□□□ 1.33
CBWD3-201ENST00000360171 FBXO18Q8NFZ0 1043 aa23.36■■□□□ 1.33
CBWD3-201ENST00000360171 ESR2Q92731 530 aa23.36■■□□□ 1.33
CBWD3-201ENST00000360171 GTPBP4Q9BZE4 634 aaKnown RBP23.36■■□□□ 1.33
CBWD3-201ENST00000360171 KIAA1468Q9P260 1216 aa23.36■■□□□ 1.33
CBWD3-201ENST00000360171 CCDC69A6NI79 296 aa23.35■■□□□ 1.33
CBWD3-201ENST00000360171 KIF2AO00139 706 aaPredicted RBP23.35■■□□□ 1.33
CBWD3-201ENST00000360171 PCP11498 1178 aaKnown RBP23.35■■□□□ 1.33
CBWD3-201ENST00000360171 HHIPL2Q6UWX4 724 aa23.35■■□□□ 1.33
CBWD3-201ENST00000360171 AOPEPQ8N6M6 819 aa23.35■■□□□ 1.33
CBWD3-201ENST00000360171 C8orf76Q96K31 380 aa23.35■■□□□ 1.33
CBWD3-201ENST00000360171 CGNQ9P2M7 1197 aaKnown RBP23.35■■□□□ 1.33
CBWD3-201ENST00000360171 ARFGEF1Q9Y6D6 1849 aa23.35■■□□□ 1.33
CBWD3-201ENST00000360171 ORC4O43929 436 aa23.35■■□□□ 1.33
CBWD3-201ENST00000360171 CRKP46108 304 aa23.35■■□□□ 1.33
CBWD3-201ENST00000360171 GUCY1B3Q02153 619 aa23.35■■□□□ 1.33
CBWD3-201ENST00000360171 TEKT1Q969V4 418 aa23.35■■□□□ 1.33
CBWD3-201ENST00000360171 SDF4Q9BRK5 362 aa23.35■■□□□ 1.33
CBWD3-201ENST00000360171 PCDHAC2Q9Y5I4 1007 aa23.35■■□□□ 1.33
CBWD3-201ENST00000360171 CBX1P83916 185 aa23.34■■□□□ 1.33
CBWD3-201ENST00000360171 PTPN14Q15678 1187 aa23.34■■□□□ 1.33
CBWD3-201ENST00000360171 APOBEC3HQ6NTF7 200 aaKnown RBP23.34■■□□□ 1.33
CBWD3-201ENST00000360171 APOA5Q6Q788 366 aa23.34■■□□□ 1.33
CBWD3-201ENST00000360171 SGMS1Q86VZ5 419 aa23.34■■□□□ 1.33
CBWD3-201ENST00000360171 DYNLL2Q96FJ2 89 aa23.34■■□□□ 1.33
CBWD3-201ENST00000360171 LIFRP42702 1097 aa23.34■■□□□ 1.33
CBWD3-201ENST00000360171 PLCD1P51178 756 aa23.34■■□□□ 1.33
CBWD3-201ENST00000360171 STK38Q15208 465 aa23.34■■□□□ 1.33
CBWD3-201ENST00000360171 RANBP6O60518 1105 aaKnown RBP23.33■■□□□ 1.33
CBWD3-201ENST00000360171 KCNJ6P48051 423 aa23.33■■□□□ 1.33
CBWD3-201ENST00000360171 MYSM1Q5VVJ2 828 aa23.33■■□□□ 1.33
CBWD3-201ENST00000360171 SPTLC2O15270 562 aa23.33■■□□□ 1.32
CBWD3-201ENST00000360171 SLC3A2P08195 630 aaKnown RBP23.33■■□□□ 1.32
CBWD3-201ENST00000360171 NDUFA8P51970 172 aa23.33■■□□□ 1.32
CBWD3-201ENST00000360171 ZDHHC15Q96MV8 337 aa23.33■■□□□ 1.32
CBWD3-201ENST00000360171 MTA3Q9BTC8 594 aa23.33■■□□□ 1.32
CBWD3-201ENST00000360171 DDX4Q9NQI0 724 aaKnown RBP23.33■■□□□ 1.32
CBWD3-201ENST00000360171 WDHD1O75717 1129 aaPredicted RBP23.32■■□□□ 1.32
CBWD3-201ENST00000360171 TNKSO95271 1327 aa23.32■■□□□ 1.32
CBWD3-201ENST00000360171 RXRAP19793 462 aa23.32■■□□□ 1.32
CBWD3-201ENST00000360171 ARID5BQ14865 1188 aa23.32■■□□□ 1.32
CBWD3-201ENST00000360171 SEC23AQ15436 765 aa23.32■■□□□ 1.32
CBWD3-201ENST00000360171 SF3A1Q15459 793 aaKnown RBP23.32■■□□□ 1.32
CBWD3-201ENST00000360171 CDC42EP5Q6NZY7 148 aa23.32■■□□□ 1.32
CBWD3-201ENST00000360171 CCAR2Q8N163 923 aaKnown RBP23.32■■□□□ 1.32
CBWD3-201ENST00000360171 NLGN2Q8NFZ4 835 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms