RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 NOVP48745 357 aa27.02■■□□□ 1.92
SDF4-202ENST00000360001 FOXP4Q8IVH2 680 aaPredicted RBP27.02■■□□□ 1.92
SDF4-202ENST00000360001 CRACR2BQ8N4Y2 399 aaPredicted RBP27.02■■□□□ 1.92
SDF4-202ENST00000360001 FAM151AQ8WW52 585 aa27.02■■□□□ 1.92
SDF4-202ENST00000360001 KAT14Q9H8E8 782 aa27.02■■□□□ 1.92
SDF4-202ENST00000360001 MYO1BO43795 1136 aa27.01■■□□□ 1.91
SDF4-202ENST00000360001 CEP95Q96GE4 821 aa27.01■■□□□ 1.91
SDF4-202ENST00000360001 CNOT7Q9UIV1 285 aaKnown RBP27.01■■□□□ 1.91
SDF4-202ENST00000360001 FAM196BA6NMK8 535 aa27■■□□□ 1.91
SDF4-202ENST00000360001 PNMA1Q8ND90 353 aa27■■□□□ 1.91
SDF4-202ENST00000360001 TMEM47Q9BQJ4 181 aa27■■□□□ 1.91
SDF4-202ENST00000360001 ANP32EQ9BTT0 268 aa27■■□□□ 1.91
SDF4-202ENST00000360001 VEZTQ9HBM0 779 aa27■■□□□ 1.91
SDF4-202ENST00000360001 STX8Q9UNK0 236 aa27■■□□□ 1.91
SDF4-202ENST00000360001 GREB1LQ9C091 1923 aaPredicted RBP27■■□□□ 1.91
SDF4-202ENST00000360001 IGKV6D-41A0A0C4DH26 115 aa27■■□□□ 1.91
SDF4-202ENST00000360001 STK36Q9NRP7 1315 aa27■■□□□ 1.91
SDF4-202ENST00000360001 DDX11L8A8MPP1 907 aa26.99■■□□□ 1.91
SDF4-202ENST00000360001 H3BQV1 296 aa26.99■■□□□ 1.91
SDF4-202ENST00000360001 IFFO2Q5TF58 517 aa26.99■■□□□ 1.91
SDF4-202ENST00000360001 NBPF11Q86T75 865 aa26.99■■□□□ 1.91
SDF4-202ENST00000360001 CSRNP1Q96S65 589 aa26.99■■□□□ 1.91
SDF4-202ENST00000360001 RBM28Q9NW13 759 aaKnown RBP26.99■■□□□ 1.91
SDF4-202ENST00000360001 FMNL1O95466 1100 aaPredicted RBP26.98■■□□□ 1.91
SDF4-202ENST00000360001 TATDN1Q6P1N9 297 aa26.98■■□□□ 1.91
SDF4-202ENST00000360001 FAM83AQ86UY5 434 aa26.98■■□□□ 1.91
SDF4-202ENST00000360001 FOSBP53539 338 aa26.98■■□□□ 1.91
SDF4-202ENST00000360001 SSRP1Q08945 709 aaKnown RBP26.98■■□□□ 1.91
SDF4-202ENST00000360001 RBM26Q5T8P6 1007 aaKnown RBP26.98■■□□□ 1.91
SDF4-202ENST00000360001 MCTP1Q6DN14 999 aa26.98■■□□□ 1.91
SDF4-202ENST00000360001 CMTR1Q8N1G2 835 aaKnown RBP26.98■■□□□ 1.91
SDF4-202ENST00000360001 MTMR4Q9NYA4 1195 aa26.98■■□□□ 1.91
SDF4-202ENST00000360001 SAMD7Q7Z3H4 446 aa26.97■■□□□ 1.91
SDF4-202ENST00000360001 FERMT3Q86UX7 667 aa26.97■■□□□ 1.91
SDF4-202ENST00000360001 GPC2Q8N158 579 aa26.97■■□□□ 1.91
SDF4-202ENST00000360001 CTCFLQ8NI51 663 aaPredicted RBP26.97■■□□□ 1.91
SDF4-202ENST00000360001 CCDC17Q96LX7 622 aa26.97■■□□□ 1.91
SDF4-202ENST00000360001 MAP3K14Q99558 947 aa26.97■■□□□ 1.91
SDF4-202ENST00000360001 SLC26A6Q9BXS9 759 aa26.97■■□□□ 1.91
SDF4-202ENST00000360001 FUT2Q10981 343 aa26.97■■□□□ 1.91
SDF4-202ENST00000360001 FOXD4L6Q3SYB3 417 aaPredicted RBP26.97■■□□□ 1.91
SDF4-202ENST00000360001 FOXD4L3Q6VB84 417 aaPredicted RBP26.97■■□□□ 1.91
SDF4-202ENST00000360001 TRIM34Q9BYJ4 488 aa26.97■■□□□ 1.91
SDF4-202ENST00000360001 TMTC3Q6ZXV5 915 aa26.96■■□□□ 1.91
SDF4-202ENST00000360001 ATP6V1DQ9Y5K8 247 aa26.96■■□□□ 1.91
SDF4-202ENST00000360001 PLEKHA8P1O95397 391 aa26.95■■□□□ 1.91
SDF4-202ENST00000360001 TOP1P11387 765 aaKnown RBP26.95■■□□□ 1.91
SDF4-202ENST00000360001 TBC1D10BQ4KMP7 808 aaPredicted RBP26.95■■□□□ 1.91
SDF4-202ENST00000360001 CCDC82Q8N4S0 544 aa26.95■■□□□ 1.91
SDF4-202ENST00000360001 C8orf76Q96K31 380 aa26.95■■□□□ 1.91
SDF4-202ENST00000360001 AIFM3Q96NN9 605 aa26.95■■□□□ 1.91
SDF4-202ENST00000360001 TMEM39BQ9GZU3 492 aa26.95■■□□□ 1.91
SDF4-202ENST00000360001 UBE2Q2LH0YL09 131 aa26.95■■□□□ 1.9
SDF4-202ENST00000360001 GUCY1B3Q02153 619 aa26.95■■□□□ 1.9
SDF4-202ENST00000360001 CERKLQ49MI3 558 aaPredicted RBP26.95■■□□□ 1.9
SDF4-202ENST00000360001 ALG1Q9BT22 464 aa26.95■■□□□ 1.9
SDF4-202ENST00000360001 PGAP2Q9UHJ9 254 aa26.95■■□□□ 1.9
SDF4-202ENST00000360001 TCHHQ07283 1943 aa26.94■■□□□ 1.9
SDF4-202ENST00000360001 GOLGA6L22H0YM25 854 aa26.94■■□□□ 1.9
SDF4-202ENST00000360001 RESTQ13127 1097 aa26.94■■□□□ 1.9
SDF4-202ENST00000360001 TRIM22Q8IYM9 498 aa26.94■■□□□ 1.9
SDF4-202ENST00000360001 FBXO18Q8NFZ0 1043 aa26.94■■□□□ 1.9
SDF4-202ENST00000360001 RNF181Q9P0P0 153 aa26.94■■□□□ 1.9
SDF4-202ENST00000360001 HERC5Q9UII4 1024 aaKnown RBP26.94■■□□□ 1.9
SDF4-202ENST00000360001 MPHOSPH10O00566 681 aaKnown RBP26.93■■□□□ 1.9
SDF4-202ENST00000360001 GRM4Q14833 912 aa26.93■■□□□ 1.9
SDF4-202ENST00000360001 KIF4BQ2VIQ3 1234 aa26.93■■□□□ 1.9
SDF4-202ENST00000360001 OTUD7BQ6GQQ9 843 aa26.93■■□□□ 1.9
SDF4-202ENST00000360001 CLEC10AQ8IUN9 316 aa26.93■■□□□ 1.9
SDF4-202ENST00000360001 CDAN1Q8IWY9 1227 aa26.93■■□□□ 1.9
SDF4-202ENST00000360001 RGS22Q8NE09 1264 aa26.93■■□□□ 1.9
SDF4-202ENST00000360001 GJB4Q9NTQ9 266 aa26.93■■□□□ 1.9
SDF4-202ENST00000360001 KIF5BP33176 963 aa26.93■■□□□ 1.9
SDF4-202ENST00000360001 GUCY1A2P33402 732 aa26.93■■□□□ 1.9
SDF4-202ENST00000360001 SRBD1Q8N5C6 995 aaKnown RBP26.93■■□□□ 1.9
SDF4-202ENST00000360001 RNF26Q9BY78 433 aaPredicted RBP26.93■■□□□ 1.9
SDF4-202ENST00000360001 GPRC5DQ9NZD1 345 aa26.93■■□□□ 1.9
SDF4-202ENST00000360001 H7C1D1 291 aa26.92■■□□□ 1.9
SDF4-202ENST00000360001 SHROOM1Q2M3G4 852 aaPredicted RBP26.92■■□□□ 1.9
SDF4-202ENST00000360001 ASTN2O75129 1339 aaPredicted RBP26.92■■□□□ 1.9
SDF4-202ENST00000360001 MYH6P13533 1939 aa26.92■■□□□ 1.9
SDF4-202ENST00000360001 TTLL1O95922 423 aa26.91■■□□□ 1.9
SDF4-202ENST00000360001 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.91■■□□□ 1.9
SDF4-202ENST00000360001 MAD2L2Q9UI95 211 aa26.91■■□□□ 1.9
SDF4-202ENST00000360001 DEXIO95424 95 aa26.91■■□□□ 1.9
SDF4-202ENST00000360001 TNNI2P48788 182 aa26.91■■□□□ 1.9
SDF4-202ENST00000360001 WASF1Q92558 559 aa26.91■■□□□ 1.9
SDF4-202ENST00000360001 ZSCAN16Q9H4T2 348 aaPredicted RBP26.91■■□□□ 1.9
SDF4-202ENST00000360001 CNTNAP5Q8WYK1 1306 aa26.9■■□□□ 1.9
SDF4-202ENST00000360001 RRP1BQ14684 758 aaKnown RBP26.9■■□□□ 1.9
SDF4-202ENST00000360001 STAG2Q8N3U4 1231 aa26.9■■□□□ 1.9
SDF4-202ENST00000360001 CLIP2Q9UDT6 1046 aa26.9■■□□□ 1.9
SDF4-202ENST00000360001 PRPF3O43395 683 aaKnown RBP26.89■■□□□ 1.9
SDF4-202ENST00000360001 DNM1Q05193 864 aaKnown RBP26.89■■□□□ 1.9
SDF4-202ENST00000360001 RASA3Q14644 834 aa26.89■■□□□ 1.9
SDF4-202ENST00000360001 C9orf131Q5VYM1 1079 aa26.89■■□□□ 1.9
SDF4-202ENST00000360001 FAM173BQ6P4H8 233 aa26.89■■□□□ 1.9
SDF4-202ENST00000360001 LMBRD1Q9NUN5 540 aa26.89■■□□□ 1.9
SDF4-202ENST00000360001 HACL1Q9UJ83 578 aa26.89■■□□□ 1.9
SDF4-202ENST00000360001 SCAF8Q9UPN6 1271 aaKnown RBP26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms