RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 SEC23AQ15436 765 aa29.89■■■□□ 2.38
SSBP3-202ENST00000357475 Q6ZUG5 572 aa29.89■■■□□ 2.38
SSBP3-202ENST00000357475 C2orf69Q8N8R5 385 aa29.89■■■□□ 2.38
SSBP3-202ENST00000357475 TTC14Q96N46 770 aa29.89■■■□□ 2.38
SSBP3-202ENST00000357475 LARP6Q9BRS8 491 aaKnown RBP29.89■■■□□ 2.38
SSBP3-202ENST00000357475 UBAC1Q9BSL1 405 aa29.89■■■□□ 2.38
SSBP3-202ENST00000357475 TCP11L1Q9NUJ3 509 aa29.89■■■□□ 2.38
SSBP3-202ENST00000357475 MTMR4Q9NYA4 1195 aa29.89■■■□□ 2.38
SSBP3-202ENST00000357475 IFIT3O14879 490 aaKnown RBP29.88■■■□□ 2.37
SSBP3-202ENST00000357475 ASNSP08243 561 aa29.88■■■□□ 2.37
SSBP3-202ENST00000357475 IQCA1Q86XH1 822 aa29.88■■■□□ 2.37
SSBP3-202ENST00000357475 ELP3Q9H9T3 547 aa29.88■■■□□ 2.37
SSBP3-202ENST00000357475 PDRG1Q9NUG6 133 aa29.88■■■□□ 2.37
SSBP3-202ENST00000357475 SH2B2O14492 632 aaPredicted RBP29.87■■■□□ 2.37
SSBP3-202ENST00000357475 RABEP1Q15276 862 aa29.87■■■□□ 2.37
SSBP3-202ENST00000357475 TMEM67Q5HYA8 995 aa29.87■■■□□ 2.37
SSBP3-202ENST00000357475 ANKRD13AQ8IZ07 590 aa29.87■■■□□ 2.37
SSBP3-202ENST00000357475 WDR19Q8NEZ3 1342 aa29.87■■■□□ 2.37
SSBP3-202ENST00000357475 PTPRAP18433 802 aa29.86■■■□□ 2.37
SSBP3-202ENST00000357475 TOB2Q14106 344 aaPredicted RBP29.86■■■□□ 2.37
SSBP3-202ENST00000357475 LY9Q9HBG7 655 aa29.86■■■□□ 2.37
SSBP3-202ENST00000357475 CSADQ9Y600 493 aa29.86■■■□□ 2.37
SSBP3-202ENST00000357475 CD2BP2O95400 341 aaKnown RBP29.86■■■□□ 2.37
SSBP3-202ENST00000357475 EEF2P13639 858 aaKnown RBP29.86■■■□□ 2.37
SSBP3-202ENST00000357475 NOVP48745 357 aa29.86■■■□□ 2.37
SSBP3-202ENST00000357475 NT5C2P49902 561 aa29.86■■■□□ 2.37
SSBP3-202ENST00000357475 FKBP1BP68106 108 aa29.86■■■□□ 2.37
SSBP3-202ENST00000357475 ICA1Q05084 483 aa29.86■■■□□ 2.37
SSBP3-202ENST00000357475 ACER1Q8TDN7 264 aa29.86■■■□□ 2.37
SSBP3-202ENST00000357475 PICK1Q9NRD5 415 aa29.86■■■□□ 2.37
SSBP3-202ENST00000357475 STX8Q9UNK0 236 aa29.86■■■□□ 2.37
SSBP3-202ENST00000357475 A0A1W2PRG0 241 aa29.85■■■□□ 2.37
SSBP3-202ENST00000357475 ATP2B2Q01814 1243 aa29.85■■■□□ 2.37
SSBP3-202ENST00000357475 TMEM87BQ96K49 555 aa29.85■■■□□ 2.37
SSBP3-202ENST00000357475 KANSL2Q9H9L4 492 aa29.85■■■□□ 2.37
SSBP3-202ENST00000357475 ECE1P42892 770 aa29.84■■■□□ 2.37
SSBP3-202ENST00000357475 AK2P54819 239 aa29.84■■■□□ 2.37
SSBP3-202ENST00000357475 TSHZ2Q9NRE2 1034 aa29.84■■■□□ 2.37
SSBP3-202ENST00000357475 CLIP2Q9UDT6 1046 aa29.84■■■□□ 2.37
SSBP3-202ENST00000357475 WTAPQ15007 396 aa29.83■■■□□ 2.37
SSBP3-202ENST00000357475 LRRC47Q8N1G4 583 aaKnown RBP29.83■■■□□ 2.37
SSBP3-202ENST00000357475 BRF1Q92994 677 aa29.83■■■□□ 2.37
SSBP3-202ENST00000357475 USP17L5A8MUK1 530 aa29.82■■■□□ 2.36
SSBP3-202ENST00000357475 TTLL1O95922 423 aa29.82■■■□□ 2.36
SSBP3-202ENST00000357475 NOL8Q76FK4 1167 aaKnown RBP29.82■■■□□ 2.36
SSBP3-202ENST00000357475 TMEM47Q9BQJ4 181 aa29.82■■■□□ 2.36
SSBP3-202ENST00000357475 AGXT2Q9BYV1 514 aa29.82■■■□□ 2.36
SSBP3-202ENST00000357475 GINM1Q9NU53 330 aa29.82■■■□□ 2.36
SSBP3-202ENST00000357475 ZHX2Q9Y6X8 837 aa29.82■■■□□ 2.36
SSBP3-202ENST00000357475 HUNKP57058 714 aa29.81■■■□□ 2.36
SSBP3-202ENST00000357475 APOBRQ0VD83 1088 aa29.81■■■□□ 2.36
SSBP3-202ENST00000357475 SART3Q15020 963 aaKnown RBP29.81■■■□□ 2.36
SSBP3-202ENST00000357475 IFIT1BQ5T764 474 aaKnown RBP29.81■■■□□ 2.36
SSBP3-202ENST00000357475 RASGRP2Q7LDG7 609 aa29.81■■■□□ 2.36
SSBP3-202ENST00000357475 DGKHQ86XP1 1220 aa29.81■■■□□ 2.36
SSBP3-202ENST00000357475 ANKS1AQ92625 1134 aa29.81■■■□□ 2.36
SSBP3-202ENST00000357475 CHMP4CQ96CF2 233 aa29.81■■■□□ 2.36
SSBP3-202ENST00000357475 NYAP2Q9P242 653 aa29.81■■■□□ 2.36
SSBP3-202ENST00000357475 BRPF3Q9ULD4 1205 aa29.81■■■□□ 2.36
SSBP3-202ENST00000357475 PTPRFP10586 1907 aa29.81■■■□□ 2.36
SSBP3-202ENST00000357475 ERICH2A1L162 156 aa29.81■■■□□ 2.36
SSBP3-202ENST00000357475 GJA5P36382 358 aa29.81■■■□□ 2.36
SSBP3-202ENST00000357475 FGD1P98174 961 aa29.81■■■□□ 2.36
SSBP3-202ENST00000357475 DGKZQ13574 1117 aa29.81■■■□□ 2.36
SSBP3-202ENST00000357475 SAPCD2Q86UD0 394 aa29.81■■■□□ 2.36
SSBP3-202ENST00000357475 MTA3Q9BTC8 594 aa29.81■■■□□ 2.36
SSBP3-202ENST00000357475 RAB11FIP4Q86YS3 637 aa29.8■■■□□ 2.36
SSBP3-202ENST00000357475 OTUD5Q96G74 571 aa29.8■■■□□ 2.36
SSBP3-202ENST00000357475 SPDYE5A6NIY4 337 aa29.79■■■□□ 2.36
SSBP3-202ENST00000357475 TMEM88BA6NKF7 163 aa29.79■■■□□ 2.36
SSBP3-202ENST00000357475 FBXL16Q8N461 479 aa29.79■■■□□ 2.36
SSBP3-202ENST00000357475 OPTNQ96CV9 577 aa29.79■■■□□ 2.36
SSBP3-202ENST00000357475 MYL10Q9BUA6 226 aa29.79■■■□□ 2.36
SSBP3-202ENST00000357475 ALDH8A1Q9H2A2 487 aaPredicted RBP29.79■■■□□ 2.36
SSBP3-202ENST00000357475 TLL2Q9Y6L7 1015 aa29.79■■■□□ 2.36
SSBP3-202ENST00000357475 LIFRP42702 1097 aa29.78■■■□□ 2.36
SSBP3-202ENST00000357475 SPP2Q13103 211 aa29.78■■■□□ 2.36
SSBP3-202ENST00000357475 ZYXQ15942 572 aaKnown RBP29.78■■■□□ 2.36
SSBP3-202ENST00000357475 KIAA1755Q5JYT7 1200 aa29.78■■■□□ 2.36
SSBP3-202ENST00000357475 SLC10A4Q96EP9 437 aa29.78■■■□□ 2.36
SSBP3-202ENST00000357475 MTMR7Q9Y216 660 aa29.78■■■□□ 2.36
SSBP3-202ENST00000357475 AFG3L2Q9Y4W6 797 aa29.78■■■□□ 2.36
SSBP3-202ENST00000357475 TRIM75PA6NK02 468 aa29.77■■■□□ 2.36
SSBP3-202ENST00000357475 TOP1P11387 765 aaKnown RBP29.77■■■□□ 2.36
SSBP3-202ENST00000357475 CCDC178Q5BJE1 867 aa29.77■■■□□ 2.36
SSBP3-202ENST00000357475 NFXL1Q6ZNB6 911 aa29.77■■■□□ 2.36
SSBP3-202ENST00000357475 SGMS1Q86VZ5 419 aa29.77■■■□□ 2.36
SSBP3-202ENST00000357475 ERO1BQ86YB8 467 aa29.77■■■□□ 2.36
SSBP3-202ENST00000357475 MKL1Q969V6 931 aa29.77■■■□□ 2.36
SSBP3-202ENST00000357475 WDR18Q9BV38 432 aa29.77■■■□□ 2.36
SSBP3-202ENST00000357475 TPCN1Q9ULQ1 816 aa29.77■■■□□ 2.36
SSBP3-202ENST00000357475 ZNF280CQ8ND82 737 aa29.76■■■□□ 2.36
SSBP3-202ENST00000357475 KAT14Q9H8E8 782 aa29.76■■■□□ 2.36
SSBP3-202ENST00000357475 ARHGEF10LQ9HCE6 1279 aa29.76■■■□□ 2.36
SSBP3-202ENST00000357475 ABT1Q9ULW3 272 aaKnown RBP29.76■■■□□ 2.36
SSBP3-202ENST00000357475 TMX2Q9Y320 296 aa29.76■■■□□ 2.36
SSBP3-202ENST00000357475 KLF18A0A0U1RQI7 1052 aa29.76■■■□□ 2.35
SSBP3-202ENST00000357475 IRF6O14896 467 aa29.76■■■□□ 2.35
SSBP3-202ENST00000357475 LARGE1O95461 756 aa29.76■■■□□ 2.35
SSBP3-202ENST00000357475 RXRAP19793 462 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms