RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 CCDC84Q86UT8 332 aaPredicted RBP12.74□□□□□ -0.37
SVIP-201ENST00000354193 KCNG4Q8TDN1 519 aa12.74□□□□□ -0.37
SVIP-201ENST00000354193 TMEM47Q9BQJ4 181 aa12.74□□□□□ -0.37
SVIP-201ENST00000354193 PIM2Q9P1W9 311 aa12.74□□□□□ -0.37
SVIP-201ENST00000354193 AKR1B1P15121 316 aa12.74□□□□□ -0.37
SVIP-201ENST00000354193 TPD52L1Q16890 204 aaPredicted RBP12.74□□□□□ -0.37
SVIP-201ENST00000354193 LETM2Q2VYF4 491 aa12.74□□□□□ -0.37
SVIP-201ENST00000354193 BRAPQ7Z569 592 aa12.74□□□□□ -0.37
SVIP-201ENST00000354193 CDK11BP21127 795 aaKnown RBP12.74□□□□□ -0.37
SVIP-201ENST00000354193 USH1GQ495M9 461 aa12.74□□□□□ -0.37
SVIP-201ENST00000354193 FBXO41Q8TF61 875 aa12.74□□□□□ -0.37
SVIP-201ENST00000354193 DHX58Q96C10 678 aa12.74□□□□□ -0.37
SVIP-201ENST00000354193 CCDC34Q96HJ3 373 aa12.74□□□□□ -0.37
SVIP-201ENST00000354193 SLC1A4P43007 532 aa12.73□□□□□ -0.37
SVIP-201ENST00000354193 TYRO3Q06418 890 aa12.73□□□□□ -0.37
SVIP-201ENST00000354193 CERKLQ49MI3 558 aaPredicted RBP12.73□□□□□ -0.37
SVIP-201ENST00000354193 DALRD3Q5D0E6 543 aaKnown RBP12.73□□□□□ -0.37
SVIP-201ENST00000354193 CDC42EP5Q6NZY7 148 aa12.73□□□□□ -0.37
SVIP-201ENST00000354193 FILIP1Q7Z7B0 1213 aa12.73□□□□□ -0.37
SVIP-201ENST00000354193 NOSTRINQ8IVI9 506 aa12.73□□□□□ -0.37
SVIP-201ENST00000354193 NAP1L5Q96NT1 182 aaPredicted RBP12.73□□□□□ -0.37
SVIP-201ENST00000354193 RTFDC1Q9BY42 306 aaPredicted RBP12.73□□□□□ -0.37
SVIP-201ENST00000354193 LETM1O95202 739 aaPredicted RBP12.73□□□□□ -0.37
SVIP-201ENST00000354193 PRAMEF18Q5VWM3 479 aa12.73□□□□□ -0.37
SVIP-201ENST00000354193 ZFPM1Q8IX07 1006 aa12.73□□□□□ -0.37
SVIP-201ENST00000354193 SMC2O95347 1197 aa12.73□□□□□ -0.37
SVIP-201ENST00000354193 COL22A1Q8NFW1 1626 aaPredicted RBP12.73□□□□□ -0.37
SVIP-201ENST00000354193 SHANK3Q9BYB0 1731 aa12.72□□□□□ -0.37
SVIP-201ENST00000354193 COA7Q96BR5 231 aa12.72□□□□□ -0.37
SVIP-201ENST00000354193 NDUFA8P51970 172 aa12.72□□□□□ -0.37
SVIP-201ENST00000354193 TBC1D10BQ4KMP7 808 aaPredicted RBP12.72□□□□□ -0.37
SVIP-201ENST00000354193 SGMS1Q86VZ5 419 aa12.72□□□□□ -0.37
SVIP-201ENST00000354193 SUPT20HQ8NEM7 779 aa12.72□□□□□ -0.37
SVIP-201ENST00000354193 RRP36Q96EU6 259 aaKnown RBP12.72□□□□□ -0.37
SVIP-201ENST00000354193 CAMKK2Q96RR4 588 aa12.72□□□□□ -0.37
SVIP-201ENST00000354193 DDX4Q9NQI0 724 aaKnown RBP12.72□□□□□ -0.37
SVIP-201ENST00000354193 RBM28Q9NW13 759 aaKnown RBP12.72□□□□□ -0.37
SVIP-201ENST00000354193 USP17L5A8MUK1 530 aa12.72□□□□□ -0.37
SVIP-201ENST00000354193 FMNL1O95466 1100 aaPredicted RBP12.72□□□□□ -0.37
SVIP-201ENST00000354193 VEGFAP15692 232 aaPredicted RBP12.72□□□□□ -0.37
SVIP-201ENST00000354193 SRBD1Q8N5C6 995 aaKnown RBP12.72□□□□□ -0.37
SVIP-201ENST00000354193 NUP88Q99567 741 aaPredicted RBP12.72□□□□□ -0.37
SVIP-201ENST00000354193 ZHX3Q9H4I2 956 aa12.72□□□□□ -0.37
SVIP-201ENST00000354193 BIN2Q9UBW5 565 aaPredicted RBP12.72□□□□□ -0.37
SVIP-201ENST00000354193 PCDHB6Q9Y5E3 794 aa12.72□□□□□ -0.37
SVIP-201ENST00000354193 SCG2P13521 617 aa12.71□□□□□ -0.37
SVIP-201ENST00000354193 GNAQP50148 359 aa12.71□□□□□ -0.37
SVIP-201ENST00000354193 KIAA2012Q0VF49 1180 aa12.71□□□□□ -0.37
SVIP-201ENST00000354193 INF2Q27J81 1249 aa12.71□□□□□ -0.37
SVIP-201ENST00000354193 PRMT6Q96LA8 375 aaPredicted RBP12.71□□□□□ -0.37
SVIP-201ENST00000354193 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.71□□□□□ -0.37
SVIP-201ENST00000354193 BTAF1O14981 1849 aa12.71□□□□□ -0.37
SVIP-201ENST00000354193 COL1A1P02452 1464 aaPredicted RBP12.71□□□□□ -0.37
SVIP-201ENST00000354193 POLR2DO15514 142 aaKnown RBP12.71□□□□□ -0.37
SVIP-201ENST00000354193 NBPF11Q86T75 865 aa12.71□□□□□ -0.37
SVIP-201ENST00000354193 PIGSQ96S52 555 aa12.71□□□□□ -0.37
SVIP-201ENST00000354193 ALDH8A1Q9H2A2 487 aaPredicted RBP12.71□□□□□ -0.37
SVIP-201ENST00000354193 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.71□□□□□ -0.37
SVIP-201ENST00000354193 GPR75-ASB3A0A0A6YYF3 556 aa12.71□□□□□ -0.38
SVIP-201ENST00000354193 PSMD14O00487 310 aa12.71□□□□□ -0.38
SVIP-201ENST00000354193 RASA1P20936 1047 aa12.71□□□□□ -0.38
SVIP-201ENST00000354193 SEPT2Q15019 361 aa12.71□□□□□ -0.38
SVIP-201ENST00000354193 TAOK3Q9H2K8 898 aa12.71□□□□□ -0.38
SVIP-201ENST00000354193 ADCY5O95622 1261 aa12.7□□□□□ -0.38
SVIP-201ENST00000354193 FCHSD1Q86WN1 690 aa12.7□□□□□ -0.38
SVIP-201ENST00000354193 ZNF202O95125 648 aa12.7□□□□□ -0.38
SVIP-201ENST00000354193 GH2P01242 217 aa12.7□□□□□ -0.38
SVIP-201ENST00000354193 ICA1Q05084 483 aa12.7□□□□□ -0.38
SVIP-201ENST00000354193 IL1R1P14778 569 aa12.7□□□□□ -0.38
SVIP-201ENST00000354193 TTLL12Q14166 644 aaPredicted RBP12.7□□□□□ -0.38
SVIP-201ENST00000354193 SHROOM1Q2M3G4 852 aaPredicted RBP12.7□□□□□ -0.38
SVIP-201ENST00000354193 NOM1Q5C9Z4 860 aaKnown RBP12.7□□□□□ -0.38
SVIP-201ENST00000354193 TICAM2Q86XR7 235 aa12.7□□□□□ -0.38
SVIP-201ENST00000354193 CEP57L1Q8IYX8 460 aa12.7□□□□□ -0.38
SVIP-201ENST00000354193 LINC00301Q8NCQ3 95 aa12.7□□□□□ -0.38
SVIP-201ENST00000354193 ZFP91Q96JP5 570 aaPredicted RBP12.7□□□□□ -0.38
SVIP-201ENST00000354193 CEP131Q9UPN4 1083 aa12.7□□□□□ -0.38
SVIP-201ENST00000354193 UBR2Q8IWV8 1755 aa12.7□□□□□ -0.38
SVIP-201ENST00000354193 FAM160A1Q05DH4 1040 aa12.7□□□□□ -0.38
SVIP-201ENST00000354193 CPXCR1Q8N123 301 aa12.7□□□□□ -0.38
SVIP-201ENST00000354193 FAM217BQ9NTX9 383 aaPredicted RBP12.7□□□□□ -0.38
SVIP-201ENST00000354193 TXLNAP40222 546 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 TPM4P67936 248 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 TROAPQ12815 778 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 TTBK2Q6IQ55 1244 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 KRI1Q8N9T8 703 aaKnown RBP12.69□□□□□ -0.38
SVIP-201ENST00000354193 CDK5RAP3Q96JB5 506 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 AGXT2Q9BYV1 514 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 HOOK1Q9UJC3 728 aaKnown RBP12.69□□□□□ -0.38
SVIP-201ENST00000354193 SMCO2A6NFE2 343 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 MMP1P03956 469 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 ZNF76P36508 570 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 CC2D2BQ6DHV5 1058 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 TMTC3Q6ZXV5 915 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 GRAMD1CQ8IYS0 662 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 PFKFB1P16118 471 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 UBA7P41226 1012 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 ZNF445P59923 1031 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 RILPL1Q5EBL4 403 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 TTC38Q5R3I4 469 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms