RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 TRANK1O15050 2925 aa9.86□□□□□ -0.83
CD44-205ENST00000352818 BAHCC1Q9P281 2608 aa9.86□□□□□ -0.83
CD44-205ENST00000352818 RAD50Q92878 1312 aa9.85□□□□□ -0.83
CD44-205ENST00000352818 KRT37O76014 449 aa9.85□□□□□ -0.83
CD44-205ENST00000352818 HSP90B1P14625 803 aaKnown RBP9.85□□□□□ -0.83
CD44-205ENST00000352818 FOXO4P98177 505 aa9.85□□□□□ -0.83
CD44-205ENST00000352818 MFSD14BQ5SR56 506 aa9.85□□□□□ -0.83
CD44-205ENST00000352818 DCAF15Q66K64 600 aa9.85□□□□□ -0.83
CD44-205ENST00000352818 APOBEC3HQ6NTF7 200 aaKnown RBP9.85□□□□□ -0.83
CD44-205ENST00000352818 SLC39A5Q6ZMH5 540 aa9.85□□□□□ -0.83
CD44-205ENST00000352818 FASTKD5Q7L8L6 764 aaKnown RBP9.85□□□□□ -0.83
CD44-205ENST00000352818 RILPL2Q969X0 211 aa9.85□□□□□ -0.83
CD44-205ENST00000352818 PLA2G12BQ9BX93 195 aa9.85□□□□□ -0.83
CD44-205ENST00000352818 ANKRD2Q9GZV1 360 aa9.85□□□□□ -0.83
CD44-205ENST00000352818 FBXO3Q9UK99 471 aa9.85□□□□□ -0.83
CD44-205ENST00000352818 ZHX2Q9Y6X8 837 aa9.85□□□□□ -0.83
CD44-205ENST00000352818 MYH3P11055 1940 aa9.85□□□□□ -0.83
CD44-205ENST00000352818 RPAP1Q9BWH6 1393 aaPredicted RBP9.85□□□□□ -0.83
CD44-205ENST00000352818 ZNF318Q5VUA4 2279 aa9.85□□□□□ -0.83
CD44-205ENST00000352818 KMT2BQ9UMN6 2715 aaPredicted RBP9.84□□□□□ -0.83
CD44-205ENST00000352818 PHF20L1A8MW92 1017 aa9.84□□□□□ -0.83
CD44-205ENST00000352818 HIP1O00291 1037 aa9.84□□□□□ -0.83
CD44-205ENST00000352818 SGSM2O43147 1006 aa9.84□□□□□ -0.83
CD44-205ENST00000352818 ST18O60284 1047 aa9.84□□□□□ -0.83
CD44-205ENST00000352818 XRCC5P13010 732 aaKnown RBP9.84□□□□□ -0.83
CD44-205ENST00000352818 MCM2P49736 904 aa9.84□□□□□ -0.83
CD44-205ENST00000352818 FKBP1CQ5VVH2 108 aa9.84□□□□□ -0.83
CD44-205ENST00000352818 AACSQ86V21 672 aa9.84□□□□□ -0.83
CD44-205ENST00000352818 TICAM2Q86XR7 235 aa9.84□□□□□ -0.83
CD44-205ENST00000352818 RUFY2Q8WXA3 655 aa9.84□□□□□ -0.83
CD44-205ENST00000352818 EVI5LQ96CN4 794 aa9.84□□□□□ -0.83
CD44-205ENST00000352818 SLKQ9H2G2 1235 aaPredicted RBP9.84□□□□□ -0.83
CD44-205ENST00000352818 GPR108Q9NPR9 543 aa9.84□□□□□ -0.83
CD44-205ENST00000352818 SNRKQ9NRH2 765 aa9.84□□□□□ -0.83
CD44-205ENST00000352818 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.84□□□□□ -0.83
CD44-205ENST00000352818 ATRNL1Q5VV63 1379 aa9.84□□□□□ -0.83
CD44-205ENST00000352818 DNM1LO00429 736 aa9.83□□□□□ -0.84
CD44-205ENST00000352818 CIAO1O76071 339 aa9.83□□□□□ -0.84
CD44-205ENST00000352818 SLURP2P0DP57 97 aa9.83□□□□□ -0.84
CD44-205ENST00000352818 PTPRAP18433 802 aa9.83□□□□□ -0.84
CD44-205ENST00000352818 RASIP1Q5U651 963 aa9.83□□□□□ -0.84
CD44-205ENST00000352818 C16orf59Q7L2K0 433 aa9.83□□□□□ -0.84
CD44-205ENST00000352818 CCDC84Q86UT8 332 aaPredicted RBP9.83□□□□□ -0.84
CD44-205ENST00000352818 EAF2Q96CJ1 260 aaPredicted RBP9.83□□□□□ -0.84
CD44-205ENST00000352818 BCL11AQ9H165 835 aa9.83□□□□□ -0.84
CD44-205ENST00000352818 AGTPBP1Q9UPW5 1226 aa9.83□□□□□ -0.84
CD44-205ENST00000352818 CFAP47Q6ZTR5 3102 aa9.82□□□□□ -0.84
CD44-205ENST00000352818 CD2BP2O95400 341 aaKnown RBP9.82□□□□□ -0.84
CD44-205ENST00000352818 ZKSCAN1P17029 563 aaPredicted RBP9.82□□□□□ -0.84
CD44-205ENST00000352818 HSPA4P34932 840 aa9.82□□□□□ -0.84
CD44-205ENST00000352818 KCNJ4P48050 445 aa9.82□□□□□ -0.84
CD44-205ENST00000352818 AAK1Q2M2I8 961 aa9.82□□□□□ -0.84
CD44-205ENST00000352818 LMBR1LQ6UX01 489 aa9.82□□□□□ -0.84
CD44-205ENST00000352818 ZNF804AQ7Z570 1209 aa9.82□□□□□ -0.84
CD44-205ENST00000352818 TDRD7Q8NHU6 1098 aaKnown RBP9.82□□□□□ -0.84
CD44-205ENST00000352818 FLRT1Q9NZU1 646 aa9.82□□□□□ -0.84
CD44-205ENST00000352818 TRIOO75962 3097 aa9.81□□□□□ -0.84
CD44-205ENST00000352818 PTPRZ1P23471 2315 aaPredicted RBP9.81□□□□□ -0.84
CD44-205ENST00000352818 PRRC2BQ5JSZ5 2229 aaKnown RBP9.81□□□□□ -0.84
CD44-205ENST00000352818 ATP5JP18859 108 aa9.81□□□□□ -0.84
CD44-205ENST00000352818 ITGA6P23229 1130 aa9.81□□□□□ -0.84
CD44-205ENST00000352818 IGHMBP2P38935 993 aaKnown RBP9.81□□□□□ -0.84
CD44-205ENST00000352818 IL15P40933 162 aaPredicted RBP9.81□□□□□ -0.84
CD44-205ENST00000352818 TLE2Q04725 743 aa9.81□□□□□ -0.84
CD44-205ENST00000352818 TNNI3KQ59H18 835 aa9.81□□□□□ -0.84
CD44-205ENST00000352818 GJC2Q5T442 439 aaPredicted RBP9.81□□□□□ -0.84
CD44-205ENST00000352818 TRPV1Q8NER1 839 aa9.81□□□□□ -0.84
CD44-205ENST00000352818 LPAR1Q92633 364 aa9.81□□□□□ -0.84
CD44-205ENST00000352818 HOOK2Q96ED9 719 aa9.81□□□□□ -0.84
CD44-205ENST00000352818 ZDHHC15Q96MV8 337 aa9.81□□□□□ -0.84
CD44-205ENST00000352818 UIMC1Q96RL1 719 aa9.81□□□□□ -0.84
CD44-205ENST00000352818 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.81□□□□□ -0.84
CD44-205ENST00000352818 LSG1Q9H089 658 aaKnown RBP9.81□□□□□ -0.84
CD44-205ENST00000352818 SIL1Q9H173 461 aa9.81□□□□□ -0.84
CD44-205ENST00000352818 KCNH6Q9H252 994 aa9.81□□□□□ -0.84
CD44-205ENST00000352818 ANO2Q9NQ90 1003 aa9.81□□□□□ -0.84
CD44-205ENST00000352818 DIAPH3Q9NSV4 1193 aa9.81□□□□□ -0.84
CD44-205ENST00000352818 MORF4L1Q9UBU8 362 aa9.81□□□□□ -0.84
CD44-205ENST00000352818 YBX2Q9Y2T7 364 aaKnown RBP9.81□□□□□ -0.84
CD44-205ENST00000352818 FPGT-TNNI3KV9GXZ4 949 aa9.81□□□□□ -0.84
CD44-205ENST00000352818 DNAH14Q0VDD8 3507 aa9.81□□□□□ -0.84
CD44-205ENST00000352818 RLFQ13129 1914 aa9.81□□□□□ -0.84
CD44-205ENST00000352818 LRRC37A2A6NM11 1700 aa9.81□□□□□ -0.84
CD44-205ENST00000352818 KIAA0355O15063 1070 aa9.8□□□□□ -0.84
CD44-205ENST00000352818 FRAT2O75474 233 aaPredicted RBP9.8□□□□□ -0.84
CD44-205ENST00000352818 NFIAQ12857 509 aa9.8□□□□□ -0.84
CD44-205ENST00000352818 MORN1Q5T089 497 aa9.8□□□□□ -0.84
CD44-205ENST00000352818 ATG9AQ7Z3C6 839 aa9.8□□□□□ -0.84
CD44-205ENST00000352818 ZFPM1Q8IX07 1006 aa9.8□□□□□ -0.84
CD44-205ENST00000352818 SCYL3Q8IZE3 742 aa9.8□□□□□ -0.84
CD44-205ENST00000352818 MICALL1Q8N3F8 863 aa9.8□□□□□ -0.84
CD44-205ENST00000352818 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.8□□□□□ -0.84
CD44-205ENST00000352818 KCNB2Q92953 911 aa9.8□□□□□ -0.84
CD44-205ENST00000352818 IL25Q9H293 177 aa9.8□□□□□ -0.84
CD44-205ENST00000352818 TSPYL2Q9H2G4 693 aaPredicted RBP9.8□□□□□ -0.84
CD44-205ENST00000352818 CWC22Q9HCG8 908 aaKnown RBP9.8□□□□□ -0.84
CD44-205ENST00000352818 TXNRD2Q9NNW7 524 aa9.8□□□□□ -0.84
CD44-205ENST00000352818 TLR7Q9NYK1 1049 aaKnown RBP9.8□□□□□ -0.84
CD44-205ENST00000352818 DDX20Q9UHI6 824 aaKnown RBP9.8□□□□□ -0.84
CD44-205ENST00000352818 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms