RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 ASXL1Q8IXJ9 1541 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 LLPHQ9BRT6 129 aaKnown RBP6.8□□□□□ -1.32
CSMD1-201ENST00000335551 GSTA1P08263 222 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 GSTA2P09210 222 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 C20orf194Q5TEA3 1177 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 NXNQ6DKJ4 435 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 NBPF10Q6P3W6 841 aaKnown RBP6.8□□□□□ -1.32
CSMD1-201ENST00000335551 DBF4Q9UBU7 674 aaPredicted RBP6.8□□□□□ -1.32
CSMD1-201ENST00000335551 MAD1L1Q9Y6D9 718 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 BCRP11274 1271 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 PAK1Q13153 545 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 MCMDC2Q4G0Z9 681 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 ANKRD42Q8N9B4 389 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 POLR3CQ9BUI4 534 aaPredicted RBP6.8□□□□□ -1.32
CSMD1-201ENST00000335551 TRIM15Q9C019 465 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 EXOC7Q9UPT5 735 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 ARHGAP10A1A4S6 786 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 RNASE9P60153 205 aaKnown RBP6.8□□□□□ -1.32
CSMD1-201ENST00000335551 TOM1L2Q6ZVM7 507 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 DPH6Q7L8W6 267 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 MLKLQ8NB16 471 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 ARHGAP18Q8N392 663 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 NECAB1Q8N987 351 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 MRRFQ96E11 262 aaKnown RBP6.8□□□□□ -1.32
CSMD1-201ENST00000335551 CDK19Q9BWU1 502 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 NOC2LQ9Y3T9 749 aaKnown RBP6.8□□□□□ -1.32
CSMD1-201ENST00000335551 EIF3CLB5ME19 914 aaKnown RBP6.79□□□□□ -1.32
CSMD1-201ENST00000335551 ZPR1O75312 459 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 EIF3CQ99613 913 aaKnown RBP6.79□□□□□ -1.32
CSMD1-201ENST00000335551 LARP6Q9BRS8 491 aaKnown RBP6.79□□□□□ -1.32
CSMD1-201ENST00000335551 CABP5Q9NP86 173 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 TROQ12816 1431 aaPredicted RBP6.79□□□□□ -1.32
CSMD1-201ENST00000335551 SYNJ1O43426 1573 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 PASKQ96RG2 1323 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 CFTRP13569 1480 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 PYGLP06737 847 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 RPSAP08865 295 aaKnown RBP6.79□□□□□ -1.32
CSMD1-201ENST00000335551 MCF2P10911 925 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 ATP6V0A1Q93050 837 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 NBPF3Q9H094 633 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 KCNH3Q9ULD8 1083 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 KRT4P19013 534 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 STX17P56962 302 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 FAM8A1Q9UBU6 413 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 MAGEA9P43362 315 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 HAUS3Q68CZ6 603 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 DCUN1D2Q6PH85 259 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 KRIT1O00522 736 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 PFDN6O15212 129 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 GNA14O95837 355 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 KIF11P52732 1056 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 RSAD2Q8WXG1 361 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 RUSC2Q8N2Y8 1516 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 PRAM1Q96QH2 718 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 CDC5LQ99459 802 aaKnown RBP6.79□□□□□ -1.32
CSMD1-201ENST00000335551 SH2D4AQ9H788 454 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 PRDM11Q9NQV5 511 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 AMFRQ9UKV5 643 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 KDM5AP29375 1690 aaKnown RBP6.79□□□□□ -1.32
CSMD1-201ENST00000335551 KCNH5Q8NCM2 988 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 NSMCE1Q8WV22 266 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 CCDC85AQ96PX6 553 aaPredicted RBP6.79□□□□□ -1.32
CSMD1-201ENST00000335551 FAM133BQ5BKY9 247 aaKnown RBP6.79□□□□□ -1.32
CSMD1-201ENST00000335551 NBPF14Q5TI25 921 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 MYO1AQ9UBC5 1043 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 TOPBP1Q92547 1522 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 KIF21AQ7Z4S6 1674 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 CUTAO60888 179 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 BIRC3Q13489 604 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 CWF19L2Q2TBE0 894 aaKnown RBP6.79□□□□□ -1.32
CSMD1-201ENST00000335551 PALM2Q8IXS6 379 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 ZBTB9Q96C00 473 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 RMDN2Q96LZ7 410 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 VAT1LQ9HCJ6 419 aa6.79□□□□□ -1.32
CSMD1-201ENST00000335551 FLOT2Q14254 428 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 NONOQ15233 471 aaKnown RBP eCLIP6.78□□□□□ -1.32
CSMD1-201ENST00000335551 RPGRQ92834 1020 aaKnown RBP6.78□□□□□ -1.32
CSMD1-201ENST00000335551 TRIM55Q9BYV6 548 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 DAPK3O43293 454 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 ATP5HO75947 161 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 STRN3Q13033 797 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 ARHGAP45Q92619 1136 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 SERPINI1Q99574 410 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 IPO11Q9UI26 975 aaKnown RBP6.78□□□□□ -1.32
CSMD1-201ENST00000335551 STX8Q9UNK0 236 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 CSGALNACT2Q8N6G5 542 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 CCDC8Q9H0W5 538 aaPredicted RBP6.78□□□□□ -1.32
CSMD1-201ENST00000335551 HYOU1Q9Y4L1 999 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 RBM8AQ9Y5S9 174 aaKnown RBP6.78□□□□□ -1.32
CSMD1-201ENST00000335551 PSDA5PKW4 1024 aaPredicted RBP6.78□□□□□ -1.32
CSMD1-201ENST00000335551 TTI1O43156 1089 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 HDAC4P56524 1084 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 MCF2L2Q86YR7 1114 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 FAM186BQ8IYM0 893 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 TCP11Q8WWU5 503 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 TTC21BQ7Z4L5 1316 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 KDM1AO60341 852 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 APOA1P02647 267 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 UQCRFS1P1P0C7P4 283 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 NLRP12P59046 1061 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms