RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 TACC3Q9Y6A5 838 aa11.1□□□□□ -0.63
C11orf54-201ENST00000331239 TAF6LQ9Y6J9 622 aa11.1□□□□□ -0.63
C11orf54-201ENST00000331239 CCDC196A0A1B0GTZ2 297 aa11.09□□□□□ -0.63
C11orf54-201ENST00000331239 PHF20L1A8MW92 1017 aa11.09□□□□□ -0.63
C11orf54-201ENST00000331239 IFIT3O14879 490 aaKnown RBP11.09□□□□□ -0.63
C11orf54-201ENST00000331239 SMARCA1P28370 1054 aa11.09□□□□□ -0.63
C11orf54-201ENST00000331239 CAP2P40123 477 aa11.09□□□□□ -0.63
C11orf54-201ENST00000331239 FGD1P98174 961 aa11.09□□□□□ -0.63
C11orf54-201ENST00000331239 ABCB5Q2M3G0 1257 aa11.09□□□□□ -0.63
C11orf54-201ENST00000331239 TMEM67Q5HYA8 995 aa11.09□□□□□ -0.63
C11orf54-201ENST00000331239 Q6ZUG5 572 aa11.09□□□□□ -0.63
C11orf54-201ENST00000331239 CYB5R4Q7L1T6 521 aa11.09□□□□□ -0.63
C11orf54-201ENST00000331239 USP48Q86UV5 1035 aa11.09□□□□□ -0.63
C11orf54-201ENST00000331239 DNAJC18Q9H819 358 aa11.09□□□□□ -0.63
C11orf54-201ENST00000331239 RRAGCQ9HB90 399 aa11.09□□□□□ -0.63
C11orf54-201ENST00000331239 TOMM22Q9NS69 142 aa11.09□□□□□ -0.63
C11orf54-201ENST00000331239 DOCK1Q14185 1865 aa11.09□□□□□ -0.63
C11orf54-201ENST00000331239 TOP1P11387 765 aaKnown RBP11.09□□□□□ -0.63
C11orf54-201ENST00000331239 LLPHQ9BRT6 129 aaKnown RBP11.09□□□□□ -0.63
C11orf54-201ENST00000331239 LY9Q9HBG7 655 aa11.09□□□□□ -0.63
C11orf54-201ENST00000331239 RRAGDQ9NQL2 400 aaPredicted RBP11.09□□□□□ -0.63
C11orf54-201ENST00000331239 MTMR4Q9NYA4 1195 aa11.09□□□□□ -0.63
C11orf54-201ENST00000331239 DDX49Q9Y6V7 483 aaKnown RBP11.09□□□□□ -0.63
C11orf54-201ENST00000331239 PAPPA2Q9BXP8 1791 aa11.08□□□□□ -0.64
C11orf54-201ENST00000331239 ATAD5Q96QE3 1844 aa11.08□□□□□ -0.64
C11orf54-201ENST00000331239 TTLL1O95922 423 aa11.08□□□□□ -0.64
C11orf54-201ENST00000331239 IREB2P48200 963 aaKnown RBP11.08□□□□□ -0.64
C11orf54-201ENST00000331239 AK2P54819 239 aa11.08□□□□□ -0.64
C11orf54-201ENST00000331239 CUL4AQ13619 759 aa11.08□□□□□ -0.64
C11orf54-201ENST00000331239 TOB2Q14106 344 aaPredicted RBP11.08□□□□□ -0.64
C11orf54-201ENST00000331239 RRP12Q5JTH9 1297 aaKnown RBP11.08□□□□□ -0.64
C11orf54-201ENST00000331239 FAM177A1Q8N128 213 aaPredicted RBP11.08□□□□□ -0.64
C11orf54-201ENST00000331239 LZTS2Q9BRK4 669 aa11.08□□□□□ -0.64
C11orf54-201ENST00000331239 PFKFB2O60825 505 aa11.08□□□□□ -0.64
C11orf54-201ENST00000331239 PKP1Q13835 747 aa11.08□□□□□ -0.64
C11orf54-201ENST00000331239 IFIT1BQ5T764 474 aaKnown RBP11.08□□□□□ -0.64
C11orf54-201ENST00000331239 MCTP1Q6DN14 999 aa11.08□□□□□ -0.64
C11orf54-201ENST00000331239 CHADLQ6NUI6 762 aa11.08□□□□□ -0.64
C11orf54-201ENST00000331239 CATIPQ7Z7H3 387 aa11.08□□□□□ -0.64
C11orf54-201ENST00000331239 GAS2L3Q86XJ1 694 aa11.08□□□□□ -0.64
C11orf54-201ENST00000331239 ENAHQ8N8S7 591 aaPredicted RBP11.08□□□□□ -0.64
C11orf54-201ENST00000331239 KLRG1Q96E93 195 aa11.08□□□□□ -0.64
C11orf54-201ENST00000331239 WDR18Q9BV38 432 aa11.08□□□□□ -0.64
C11orf54-201ENST00000331239 UPF3BQ9BZI7 483 aaKnown RBP11.08□□□□□ -0.64
C11orf54-201ENST00000331239 RBM28Q9NW13 759 aaKnown RBP11.08□□□□□ -0.64
C11orf54-201ENST00000331239 TNKSO95271 1327 aa11.08□□□□□ -0.64
C11orf54-201ENST00000331239 TRPM7Q96QT4 1865 aa11.08□□□□□ -0.64
C11orf54-201ENST00000331239 CCDC69A6NI79 296 aa11.07□□□□□ -0.64
C11orf54-201ENST00000331239 GNAQP50148 359 aa11.07□□□□□ -0.64
C11orf54-201ENST00000331239 NBPF12Q5TAG4 269 aaPredicted RBP11.07□□□□□ -0.64
C11orf54-201ENST00000331239 ARMC9Q7Z3E5 817 aa11.07□□□□□ -0.64
C11orf54-201ENST00000331239 GMCL1P1Q8NEA9 526 aa11.07□□□□□ -0.64
C11orf54-201ENST00000331239 AS3MTQ9HBK9 375 aa11.07□□□□□ -0.64
C11orf54-201ENST00000331239 ASTN2O75129 1339 aaPredicted RBP11.07□□□□□ -0.64
C11orf54-201ENST00000331239 MAP3K9P80192 1104 aa11.07□□□□□ -0.64
C11orf54-201ENST00000331239 CDCA5Q96FF9 252 aa11.07□□□□□ -0.64
C11orf54-201ENST00000331239 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.07□□□□□ -0.64
C11orf54-201ENST00000331239 ARHGEF10LQ9HCE6 1279 aa11.07□□□□□ -0.64
C11orf54-201ENST00000331239 IL17RBQ9NRM6 502 aa11.07□□□□□ -0.64
C11orf54-201ENST00000331239 RBM27Q9P2N5 1060 aaKnown RBP11.07□□□□□ -0.64
C11orf54-201ENST00000331239 SLC12A7Q9Y666 1083 aa11.07□□□□□ -0.64
C11orf54-201ENST00000331239 CDKL5O76039 1030 aa11.06□□□□□ -0.64
C11orf54-201ENST00000331239 AKR1B1P15121 316 aa11.06□□□□□ -0.64
C11orf54-201ENST00000331239 KIF5BP33176 963 aa11.06□□□□□ -0.64
C11orf54-201ENST00000331239 EAPPQ56P03 285 aaPredicted RBP11.06□□□□□ -0.64
C11orf54-201ENST00000331239 CPLX2Q6PUV4 134 aaKnown RBP11.06□□□□□ -0.64
C11orf54-201ENST00000331239 TEX2Q8IWB9 1127 aa11.06□□□□□ -0.64
C11orf54-201ENST00000331239 SCYL3Q8IZE3 742 aa11.06□□□□□ -0.64
C11orf54-201ENST00000331239 RBM46Q8TBY0 533 aaKnown RBP11.06□□□□□ -0.64
C11orf54-201ENST00000331239 TMX3Q96JJ7 454 aa11.06□□□□□ -0.64
C11orf54-201ENST00000331239 KAT14Q9H8E8 782 aa11.06□□□□□ -0.64
C11orf54-201ENST00000331239 ZBTB21Q9ULJ3 1066 aa11.06□□□□□ -0.64
C11orf54-201ENST00000331239 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.06□□□□□ -0.64
C11orf54-201ENST00000331239 MYH4Q9Y623 1939 aa11.06□□□□□ -0.64
C11orf54-201ENST00000331239 PLA2G6O60733 806 aa11.06□□□□□ -0.64
C11orf54-201ENST00000331239 PRDM1O75626 825 aa11.06□□□□□ -0.64
C11orf54-201ENST00000331239 SLC44A5Q8NCS7 719 aa11.06□□□□□ -0.64
C11orf54-201ENST00000331239 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.06□□□□□ -0.64
C11orf54-201ENST00000331239 BRF1Q92994 677 aa11.06□□□□□ -0.64
C11orf54-201ENST00000331239 CLEC11AQ9Y240 323 aa11.06□□□□□ -0.64
C11orf54-201ENST00000331239 SSC5DA1L4H1 1573 aa11.06□□□□□ -0.64
C11orf54-201ENST00000331239 USP17L5A8MUK1 530 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 ZBTB43O43298 467 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 USP2O75604 605 aaPredicted RBP11.05□□□□□ -0.64
C11orf54-201ENST00000331239 PDIA3P30101 505 aaKnown RBP11.05□□□□□ -0.64
C11orf54-201ENST00000331239 USP14P54578 494 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 APOA5Q6Q788 366 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 ANKRD13AQ8IZ07 590 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 DCAF4Q8WV16 495 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 GPBP1L1Q9HC44 474 aaPredicted RBP11.05□□□□□ -0.64
C11orf54-201ENST00000331239 INCENPQ9NQS7 918 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 LMBRD1Q9NUN5 540 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 KIF3AQ9Y496 699 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 C19orf81C9J6K1 198 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 SNHG28P0DPA3 235 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 FSTL1Q12841 308 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 TPRNQ4KMQ1 711 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 FAM47AQ5JRC9 791 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 LDLRAD1Q5T700 205 aa11.05□□□□□ -0.64
C11orf54-201ENST00000331239 NFXL1Q6ZNB6 911 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms