RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 TTC6Q86TZ1 520 aa17.74■□□□□ 0.43
TSPO-201ENST00000329563 SHISA4Q96DD7 197 aa17.74■□□□□ 0.43
TSPO-201ENST00000329563 CRNKL1Q9BZJ0 848 aaKnown RBP17.74■□□□□ 0.43
TSPO-201ENST00000329563 TXNRD2Q9NNW7 524 aa17.74■□□□□ 0.43
TSPO-201ENST00000329563 TMOD4Q9NZQ9 345 aa17.74■□□□□ 0.43
TSPO-201ENST00000329563 BAZ2AQ9UIF9 1905 aaKnown RBP17.73■□□□□ 0.43
TSPO-201ENST00000329563 C19orf81C9J6K1 198 aa17.73■□□□□ 0.43
TSPO-201ENST00000329563 MBD4O95243 580 aa17.73■□□□□ 0.43
TSPO-201ENST00000329563 HOXA7P31268 230 aaPredicted RBP17.73■□□□□ 0.43
TSPO-201ENST00000329563 IRX3P78415 501 aaPredicted RBP17.73■□□□□ 0.43
TSPO-201ENST00000329563 CHD1LQ86WJ1 897 aa17.73■□□□□ 0.43
TSPO-201ENST00000329563 ACER1Q8TDN7 264 aa17.73■□□□□ 0.43
TSPO-201ENST00000329563 U2AF1L4Q8WU68 220 aaKnown RBP17.73■□□□□ 0.43
TSPO-201ENST00000329563 P2RX7Q99572 595 aaKnown RBP17.73■□□□□ 0.43
TSPO-201ENST00000329563 MCM9Q9NXL9 1143 aa17.73■□□□□ 0.43
TSPO-201ENST00000329563 TAOK2Q9UL54 1235 aa17.73■□□□□ 0.43
TSPO-201ENST00000329563 NR2E3Q9Y5X4 410 aa17.73■□□□□ 0.43
TSPO-201ENST00000329563 H0YGN5 161 aa17.72■□□□□ 0.43
TSPO-201ENST00000329563 FARP2O94887 1054 aaPredicted RBP17.72■□□□□ 0.43
TSPO-201ENST00000329563 INHAP05111 366 aa17.72■□□□□ 0.43
TSPO-201ENST00000329563 ELNP15502 786 aa17.72■□□□□ 0.43
TSPO-201ENST00000329563 ABCB5Q2M3G0 1257 aa17.72■□□□□ 0.43
TSPO-201ENST00000329563 CERKLQ49MI3 558 aaPredicted RBP17.72■□□□□ 0.43
TSPO-201ENST00000329563 SLC44A5Q8NCS7 719 aa17.72■□□□□ 0.43
TSPO-201ENST00000329563 MORF4L1Q9UBU8 362 aa17.72■□□□□ 0.43
TSPO-201ENST00000329563 CYP2D7A0A087X1C5 515 aa17.71■□□□□ 0.43
TSPO-201ENST00000329563 SGPL1O95470 568 aa17.71■□□□□ 0.43
TSPO-201ENST00000329563 POLR3DP05423 398 aaPredicted RBP17.71■□□□□ 0.43
TSPO-201ENST00000329563 RAB3GAP1Q15042 981 aa17.71■□□□□ 0.43
TSPO-201ENST00000329563 ZYXQ15942 572 aaKnown RBP17.71■□□□□ 0.43
TSPO-201ENST00000329563 GTF3C2Q8WUA4 911 aaPredicted RBP17.71■□□□□ 0.43
TSPO-201ENST00000329563 DYNLL2Q96FJ2 89 aa17.71■□□□□ 0.43
TSPO-201ENST00000329563 PUS7LQ9H0K6 701 aaKnown RBP17.71■□□□□ 0.43
TSPO-201ENST00000329563 UNC93B1Q9H1C4 597 aa17.71■□□□□ 0.43
TSPO-201ENST00000329563 ECHDC1Q9NTX5 307 aa17.71■□□□□ 0.43
TSPO-201ENST00000329563 RBPJLQ9UBG7 517 aa17.71■□□□□ 0.43
TSPO-201ENST00000329563 COLQQ9Y215 455 aaPredicted RBP17.71■□□□□ 0.43
TSPO-201ENST00000329563 TFRCP02786 760 aaKnown RBP17.7■□□□□ 0.42
TSPO-201ENST00000329563 HERVK_113P62684 666 aa17.7■□□□□ 0.42
TSPO-201ENST00000329563 SEPT2Q15019 361 aa17.7■□□□□ 0.42
TSPO-201ENST00000329563 UBE3CQ15386 1083 aa17.7■□□□□ 0.42
TSPO-201ENST00000329563 Q3C1V9 767 aa17.7■□□□□ 0.42
TSPO-201ENST00000329563 OTUD7AQ8TE49 926 aaPredicted RBP17.7■□□□□ 0.42
TSPO-201ENST00000329563 C12orf42Q96LP6 360 aa17.7■□□□□ 0.42
TSPO-201ENST00000329563 GJD2Q9UKL4 321 aa17.7■□□□□ 0.42
TSPO-201ENST00000329563 A0A1W2PRG0 241 aa17.69■□□□□ 0.42
TSPO-201ENST00000329563 HMGCRP04035 888 aa17.69■□□□□ 0.42
TSPO-201ENST00000329563 USP17L2Q6R6M4 530 aa17.69■□□□□ 0.42
TSPO-201ENST00000329563 UBE2Q1Q7Z7E8 422 aa17.69■□□□□ 0.42
TSPO-201ENST00000329563 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.69■□□□□ 0.42
TSPO-201ENST00000329563 FXR1P51114 621 aaKnown RBP eCLIP17.68■□□□□ 0.42
TSPO-201ENST00000329563 CLEC10AQ8IUN9 316 aa17.68■□□□□ 0.42
TSPO-201ENST00000329563 DEFB118Q96PH6 123 aa17.68■□□□□ 0.42
TSPO-201ENST00000329563 KIAA1683Q9H0B3 1180 aa17.68■□□□□ 0.42
TSPO-201ENST00000329563 PAK6Q9NQU5 681 aaPredicted RBP17.68■□□□□ 0.42
TSPO-201ENST00000329563 MYH8P13535 1937 aa17.68■□□□□ 0.42
TSPO-201ENST00000329563 RANBP2P49792 3224 aaKnown RBP17.67■□□□□ 0.42
TSPO-201ENST00000329563 CNMDO75829 334 aa17.67■□□□□ 0.42
TSPO-201ENST00000329563 VCAM1P19320 739 aa17.67■□□□□ 0.42
TSPO-201ENST00000329563 KIAA1755Q5JYT7 1200 aa17.67■□□□□ 0.42
TSPO-201ENST00000329563 C12orf60Q5U649 245 aa17.67■□□□□ 0.42
TSPO-201ENST00000329563 SIAH1Q8IUQ4 282 aa17.67■□□□□ 0.42
TSPO-201ENST00000329563 CCAR1Q8IX12 1150 aaKnown RBP17.67■□□□□ 0.42
TSPO-201ENST00000329563 SOCS4Q8WXH5 440 aa17.67■□□□□ 0.42
TSPO-201ENST00000329563 LNPKQ9C0E8 428 aa17.67■□□□□ 0.42
TSPO-201ENST00000329563 PORCNQ9H237 461 aa17.67■□□□□ 0.42
TSPO-201ENST00000329563 ATP8A2Q9NTI2 1148 aa17.67■□□□□ 0.42
TSPO-201ENST00000329563 USP17L12C9JPN9 530 aa17.66■□□□□ 0.42
TSPO-201ENST00000329563 USP17L21D6R901 530 aa17.66■□□□□ 0.42
TSPO-201ENST00000329563 AKR1B1P15121 316 aa17.66■□□□□ 0.42
TSPO-201ENST00000329563 TRIM32Q13049 653 aa17.66■□□□□ 0.42
TSPO-201ENST00000329563 CHRDL2Q6WN34 429 aa17.66■□□□□ 0.42
TSPO-201ENST00000329563 TRMT44Q8IYL2 757 aaKnown RBP17.66■□□□□ 0.42
TSPO-201ENST00000329563 KBTBD3Q8NAB2 608 aa17.66■□□□□ 0.42
TSPO-201ENST00000329563 ANKLE1Q8NAG6 615 aa17.66■□□□□ 0.42
TSPO-201ENST00000329563 GPRC5AQ8NFJ5 357 aa17.66■□□□□ 0.42
TSPO-201ENST00000329563 OSBP2Q969R2 916 aa17.66■□□□□ 0.42
TSPO-201ENST00000329563 FEZ1Q99689 392 aa17.66■□□□□ 0.42
TSPO-201ENST00000329563 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.66■□□□□ 0.42
TSPO-201ENST00000329563 CABP5Q9NP86 173 aa17.66■□□□□ 0.42
TSPO-201ENST00000329563 SLC4A4Q9Y6R1 1079 aa17.66■□□□□ 0.42
TSPO-201ENST00000329563 RLFQ13129 1914 aa17.66■□□□□ 0.42
TSPO-201ENST00000329563 EVI5O60447 810 aa17.65■□□□□ 0.42
TSPO-201ENST00000329563 MAPK4P31152 587 aa17.65■□□□□ 0.42
TSPO-201ENST00000329563 CTR9Q6PD62 1173 aa17.65■□□□□ 0.42
TSPO-201ENST00000329563 CATSPERGQ6ZRH7 1159 aa17.65■□□□□ 0.42
TSPO-201ENST00000329563 PI4K2BQ8TCG2 481 aa17.65■□□□□ 0.42
TSPO-201ENST00000329563 GPATCH3Q96I76 525 aa17.65■□□□□ 0.42
TSPO-201ENST00000329563 STRBPQ96SI9 672 aaKnown RBP17.65■□□□□ 0.42
TSPO-201ENST00000329563 PAGR1Q9BTK6 254 aa17.65■□□□□ 0.42
TSPO-201ENST00000329563 HMX1Q9NP08 348 aaPredicted RBP17.65■□□□□ 0.42
TSPO-201ENST00000329563 A0A0G2JMZ2 1700 aa17.64■□□□□ 0.41
TSPO-201ENST00000329563 USP17L15C9J2P7 530 aa17.64■□□□□ 0.41
TSPO-201ENST00000329563 USP17L13C9JLJ4 530 aa17.64■□□□□ 0.41
TSPO-201ENST00000329563 USP17L11C9JVI0 530 aa17.64■□□□□ 0.41
TSPO-201ENST00000329563 USP17L18D6R9N7 530 aa17.64■□□□□ 0.41
TSPO-201ENST00000329563 USP17L22D6RA61 530 aa17.64■□□□□ 0.41
TSPO-201ENST00000329563 USP17L17D6RBQ6 530 aa17.64■□□□□ 0.41
TSPO-201ENST00000329563 USP17L19D6RCP7 530 aa17.64■□□□□ 0.41
TSPO-201ENST00000329563 USP17L20D6RJB6 530 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms