RNA–Protein interactions for RNA: ENST00000321453.11

PDE1C-201, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-201ENST00000321453 A0A087X0B3 334 aa18.68■□□□□ 0.58
PDE1C-201ENST00000321453 ACTN4O43707 911 aaKnown RBP18.68■□□□□ 0.58
PDE1C-201ENST00000321453 SLC7A5Q01650 507 aa18.68■□□□□ 0.58
PDE1C-201ENST00000321453 PPFIA1Q13136 1202 aa18.68■□□□□ 0.58
PDE1C-201ENST00000321453 CCDC122Q5T0U0 273 aa18.68■□□□□ 0.58
PDE1C-201ENST00000321453 CYP26C1Q6V0L0 522 aa18.68■□□□□ 0.58
PDE1C-201ENST00000321453 ARL8AQ96BM9 186 aa18.68■□□□□ 0.58
PDE1C-201ENST00000321453 EPSTI1Q96J88 318 aa18.68■□□□□ 0.58
PDE1C-201ENST00000321453 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.68■□□□□ 0.58
PDE1C-201ENST00000321453 UBN2Q6ZU65 1347 aa18.68■□□□□ 0.58
PDE1C-201ENST00000321453 GOLGA8AA7E2F4 631 aa18.67■□□□□ 0.58
PDE1C-201ENST00000321453 TUBB4BP68371 445 aa18.67■□□□□ 0.58
PDE1C-201ENST00000321453 SETQ01105 290 aaPredicted RBP18.67■□□□□ 0.58
PDE1C-201ENST00000321453 DIS3L2Q8IYB7 885 aaKnown RBP18.67■□□□□ 0.58
PDE1C-201ENST00000321453 JAKMIP2Q96AA8 810 aa18.67■□□□□ 0.58
PDE1C-201ENST00000321453 PSMB7Q99436 277 aa18.67■□□□□ 0.58
PDE1C-201ENST00000321453 CLGNO14967 610 aa18.67■□□□□ 0.58
PDE1C-201ENST00000321453 USP8P40818 1118 aa18.67■□□□□ 0.58
PDE1C-201ENST00000321453 KRT31Q15323 416 aa18.67■□□□□ 0.58
PDE1C-201ENST00000321453 RNF187Q5TA31 235 aaPredicted RBP18.67■□□□□ 0.58
PDE1C-201ENST00000321453 ATG9AQ7Z3C6 839 aa18.67■□□□□ 0.58
PDE1C-201ENST00000321453 NOSTRINQ8IVI9 506 aa18.67■□□□□ 0.58
PDE1C-201ENST00000321453 OTUD6BQ8N6M0 293 aa18.67■□□□□ 0.58
PDE1C-201ENST00000321453 PUS3Q9BZE2 481 aaKnown RBP18.67■□□□□ 0.58
PDE1C-201ENST00000321453 BLZF1Q9H2G9 400 aa18.67■□□□□ 0.58
PDE1C-201ENST00000321453 ANGEL1Q9UNK9 670 aaKnown RBP18.67■□□□□ 0.58
PDE1C-201ENST00000321453 AMOTL2Q9Y2J4 779 aa18.67■□□□□ 0.58
PDE1C-201ENST00000321453 TUBBP07437 444 aa18.67■□□□□ 0.58
PDE1C-201ENST00000321453 ADORA1P30542 326 aa18.67■□□□□ 0.58
PDE1C-201ENST00000321453 APOA5Q6Q788 366 aa18.67■□□□□ 0.58
PDE1C-201ENST00000321453 TBC1D10CQ8IV04 446 aa18.67■□□□□ 0.58
PDE1C-201ENST00000321453 GIMAP7Q8NHV1 300 aa18.67■□□□□ 0.58
PDE1C-201ENST00000321453 JADE2Q9NQC1 790 aa18.67■□□□□ 0.58
PDE1C-201ENST00000321453 SMARCAL1Q9NZC9 954 aa18.67■□□□□ 0.58
PDE1C-201ENST00000321453 EPN1Q9Y6I3 576 aaPredicted RBP18.67■□□□□ 0.58
PDE1C-201ENST00000321453 MED1Q15648 1581 aaPredicted RBP18.66■□□□□ 0.58
PDE1C-201ENST00000321453 KIAA0754O94854 1291 aa18.66■□□□□ 0.58
PDE1C-201ENST00000321453 LTKP29376 864 aa18.66■□□□□ 0.58
PDE1C-201ENST00000321453 ACTN3Q08043 901 aaPredicted RBP18.66■□□□□ 0.58
PDE1C-201ENST00000321453 SCARF1Q14162 830 aa18.66■□□□□ 0.58
PDE1C-201ENST00000321453 CCNI2Q6ZMN8 369 aaPredicted RBP18.66■□□□□ 0.58
PDE1C-201ENST00000321453 POTEDQ86YR6 584 aa18.66■□□□□ 0.58
PDE1C-201ENST00000321453 CNPY4Q8N129 248 aa18.66■□□□□ 0.58
PDE1C-201ENST00000321453 SLIT1O75093 1534 aa18.66■□□□□ 0.58
PDE1C-201ENST00000321453 NWD2Q9ULI1 1742 aa18.66■□□□□ 0.58
PDE1C-201ENST00000321453 FAM205CA6NFA0 338 aa18.66■□□□□ 0.58
PDE1C-201ENST00000321453 NDUFA10O95299 355 aa18.66■□□□□ 0.58
PDE1C-201ENST00000321453 NT5DC1Q5TFE4 455 aa18.66■□□□□ 0.58
PDE1C-201ENST00000321453 DHX37Q8IY37 1157 aaKnown RBP18.66■□□□□ 0.58
PDE1C-201ENST00000321453 CABS1Q96KC9 395 aa18.66■□□□□ 0.58
PDE1C-201ENST00000321453 MACROD2A1Z1Q3 448 aa18.65■□□□□ 0.58
PDE1C-201ENST00000321453 ERCC5P28715 1186 aaPredicted RBP18.65■□□□□ 0.58
PDE1C-201ENST00000321453 DUSP10Q9Y6W6 482 aa18.65■□□□□ 0.58
PDE1C-201ENST00000321453 GPAA1O43292 621 aa18.65■□□□□ 0.58
PDE1C-201ENST00000321453 ZBTB43O43298 467 aa18.65■□□□□ 0.58
PDE1C-201ENST00000321453 SSBP05455 408 aaKnown RBP eCLIP18.65■□□□□ 0.58
PDE1C-201ENST00000321453 PTPREP23469 700 aa18.65■□□□□ 0.58
PDE1C-201ENST00000321453 CUL4BQ13620 913 aa18.65■□□□□ 0.58
PDE1C-201ENST00000321453 OXER1Q8TDS5 423 aa18.65■□□□□ 0.58
PDE1C-201ENST00000321453 ESF1Q9H501 851 aaKnown RBP18.65■□□□□ 0.58
PDE1C-201ENST00000321453 CCDC196A0A1B0GTZ2 297 aa18.64■□□□□ 0.58
PDE1C-201ENST00000321453 FRMD3A2A2Y4 597 aa18.64■□□□□ 0.58
PDE1C-201ENST00000321453 HDGFP51858 240 aaKnown RBP18.64■□□□□ 0.58
PDE1C-201ENST00000321453 CDKAL1Q5VV42 579 aa18.64■□□□□ 0.58
PDE1C-201ENST00000321453 KIAA1328Q86T90 577 aa18.64■□□□□ 0.58
PDE1C-201ENST00000321453 PRPF38AQ8NAV1 312 aaKnown RBP18.64■□□□□ 0.58
PDE1C-201ENST00000321453 CDKL5O76039 1030 aa18.64■□□□□ 0.57
PDE1C-201ENST00000321453 EEF2KMTQ96G04 330 aa18.64■□□□□ 0.57
PDE1C-201ENST00000321453 HERVK_113P62684 666 aa18.64■□□□□ 0.57
PDE1C-201ENST00000321453 APBA1Q02410 837 aa18.64■□□□□ 0.57
PDE1C-201ENST00000321453 TTMPQ5BVD1 217 aa18.64■□□□□ 0.57
PDE1C-201ENST00000321453 TSEN2Q8NCE0 465 aaKnown RBP18.64■□□□□ 0.57
PDE1C-201ENST00000321453 IP6K1Q92551 441 aa18.64■□□□□ 0.57
PDE1C-201ENST00000321453 EHD2Q9NZN4 543 aa18.64■□□□□ 0.57
PDE1C-201ENST00000321453 DMGDHQ9UI17 866 aaKnown RBP18.64■□□□□ 0.57
PDE1C-201ENST00000321453 RGPD2P0DJD1 1756 aa18.63■□□□□ 0.57
PDE1C-201ENST00000321453 UBXN1Q04323 297 aa18.63■□□□□ 0.57
PDE1C-201ENST00000321453 NBPF14Q5TI25 921 aa18.63■□□□□ 0.57
PDE1C-201ENST00000321453 FBXL16Q8N461 479 aa18.63■□□□□ 0.57
PDE1C-201ENST00000321453 SMCR8Q8TEV9 937 aaPredicted RBP18.63■□□□□ 0.57
PDE1C-201ENST00000321453 CABP5Q9NP86 173 aa18.63■□□□□ 0.57
PDE1C-201ENST00000321453 C4AP0C0L4 1744 aa18.63■□□□□ 0.57
PDE1C-201ENST00000321453 C4BP0C0L5 1744 aa18.63■□□□□ 0.57
PDE1C-201ENST00000321453 SH2B2O14492 632 aaPredicted RBP18.63■□□□□ 0.57
PDE1C-201ENST00000321453 ZAP70P43403 619 aa18.63■□□□□ 0.57
PDE1C-201ENST00000321453 RABL6Q3YEC7 729 aaPredicted RBP18.63■□□□□ 0.57
PDE1C-201ENST00000321453 TRIML1Q8N9V2 468 aa18.63■□□□□ 0.57
PDE1C-201ENST00000321453 CTAGE1Q96RT6 745 aa18.63■□□□□ 0.57
PDE1C-201ENST00000321453 ZKSCAN3Q9BRR0 538 aa18.63■□□□□ 0.57
PDE1C-201ENST00000321453 VPS54Q9P1Q0 977 aa18.63■□□□□ 0.57
PDE1C-201ENST00000321453 MYO1AQ9UBC5 1043 aa18.63■□□□□ 0.57
PDE1C-201ENST00000321453 CPDO75976 1380 aa18.62■□□□□ 0.57
PDE1C-201ENST00000321453 RCCD1A6NED2 376 aa18.62■□□□□ 0.57
PDE1C-201ENST00000321453 PPP1R3GB7ZBB8 358 aa18.62■□□□□ 0.57
PDE1C-201ENST00000321453 GPTP24298 496 aa18.62■□□□□ 0.57
PDE1C-201ENST00000321453 MCM3P25205 808 aa18.62■□□□□ 0.57
PDE1C-201ENST00000321453 RDXP35241 583 aaKnown RBP18.62■□□□□ 0.57
PDE1C-201ENST00000321453 GUCY1A3Q02108 690 aa18.62■□□□□ 0.57
PDE1C-201ENST00000321453 SSRP1Q08945 709 aaKnown RBP18.62■□□□□ 0.57
PDE1C-201ENST00000321453 RRAGBQ5VZM2 374 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms