RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 UBAC1Q9BSL1 405 aa15.05■□□□□ 0
CPNE1-201ENST00000317677 ZC3H12CQ9C0D7 883 aaKnown RBP15.05■□□□□ 0
CPNE1-201ENST00000317677 GEMIN8Q9NWZ8 242 aaKnown RBP15.05■□□□□ 0
CPNE1-201ENST00000317677 PAXBP1Q9Y5B6 917 aa15.05■□□□□ 0
CPNE1-201ENST00000317677 MYH6P13533 1939 aa15.05■□□□□ -0
CPNE1-201ENST00000317677 ARFGEF1Q9Y6D6 1849 aa15.05■□□□□ -0
CPNE1-201ENST00000317677 USP5P45974 858 aa15.05■□□□□ -0
CPNE1-201ENST00000317677 PLCD1P51178 756 aa15.05■□□□□ -0
CPNE1-201ENST00000317677 NBPF11Q86T75 865 aa15.05■□□□□ -0
CPNE1-201ENST00000317677 MAPKAPK5Q8IW41 473 aa15.05■□□□□ -0
CPNE1-201ENST00000317677 KCNQ5Q9NR82 932 aa15.05■□□□□ -0
CPNE1-201ENST00000317677 DAGLAQ9Y4D2 1042 aa15.05■□□□□ -0
CPNE1-201ENST00000317677 BAG3O95817 575 aa15.04■□□□□ -0
CPNE1-201ENST00000317677 GUCY1A2P33402 732 aa15.04■□□□□ -0
CPNE1-201ENST00000317677 RTN1Q16799 776 aa15.04■□□□□ -0
CPNE1-201ENST00000317677 DALRD3Q5D0E6 543 aaKnown RBP15.04■□□□□ -0
CPNE1-201ENST00000317677 CMTR1Q8N1G2 835 aaKnown RBP15.04■□□□□ -0
CPNE1-201ENST00000317677 USP28Q96RU2 1077 aa15.04■□□□□ -0
CPNE1-201ENST00000317677 ALG1Q9BT22 464 aa15.04■□□□□ -0
CPNE1-201ENST00000317677 STK36Q9NRP7 1315 aa15.04■□□□□ -0
CPNE1-201ENST00000317677 ERICH2A1L162 156 aa15.04■□□□□ -0
CPNE1-201ENST00000317677 FMNL1O95466 1100 aaPredicted RBP15.04■□□□□ -0
CPNE1-201ENST00000317677 IFNAR1P17181 557 aa15.04■□□□□ -0
CPNE1-201ENST00000317677 TMTC2Q8N394 836 aa15.04■□□□□ -0
CPNE1-201ENST00000317677 SPATA32Q96LK8 384 aa15.04■□□□□ -0
CPNE1-201ENST00000317677 SCAND2PQ9GZW5 306 aaPredicted RBP15.04■□□□□ -0
CPNE1-201ENST00000317677 ZNF219Q9P2Y4 722 aaPredicted RBP15.04■□□□□ -0
CPNE1-201ENST00000317677 SAP30BPQ9UHR5 308 aaKnown RBP15.04■□□□□ -0
CPNE1-201ENST00000317677 FEZ2Q9UHY8 353 aaPredicted RBP15.04■□□□□ -0
CPNE1-201ENST00000317677 GOLGB1Q14789 3259 aaKnown RBP15.03■□□□□ -0
CPNE1-201ENST00000317677 GOLGA6L6A8MZA4 724 aa15.03■□□□□ -0
CPNE1-201ENST00000317677 LIG1P18858 919 aa15.03■□□□□ -0
CPNE1-201ENST00000317677 IARSP41252 1262 aaKnown RBP15.03■□□□□ -0
CPNE1-201ENST00000317677 RCAN1P53805 252 aa15.03■□□□□ -0
CPNE1-201ENST00000317677 KIF23Q02241 960 aaPredicted RBP15.03■□□□□ -0
CPNE1-201ENST00000317677 RCSD1Q6JBY9 416 aa15.03■□□□□ -0
CPNE1-201ENST00000317677 FANCBQ8NB91 859 aa15.03■□□□□ -0
CPNE1-201ENST00000317677 SLC44A5Q8NCS7 719 aa15.03■□□□□ -0
CPNE1-201ENST00000317677 SECISBP2LQ93073 1101 aaKnown RBP15.03■□□□□ -0
CPNE1-201ENST00000317677 DBNDD1Q9H9R9 158 aa15.03■□□□□ -0
CPNE1-201ENST00000317677 FLT1P17948 1338 aa15.03■□□□□ -0
CPNE1-201ENST00000317677 CDKL5O76039 1030 aa15.02■□□□□ -0
CPNE1-201ENST00000317677 KCNA3P22001 575 aa15.02■□□□□ -0
CPNE1-201ENST00000317677 TROAPQ12815 778 aa15.02■□□□□ -0
CPNE1-201ENST00000317677 KRT40Q6A162 431 aa15.02■□□□□ -0
CPNE1-201ENST00000317677 SYNE3Q6ZMZ3 975 aa15.02■□□□□ -0
CPNE1-201ENST00000317677 TEX11Q8IYF3 940 aa15.02■□□□□ -0
CPNE1-201ENST00000317677 NUP133Q8WUM0 1156 aa15.02■□□□□ -0
CPNE1-201ENST00000317677 FBXW7Q969H0 707 aa15.02■□□□□ -0
CPNE1-201ENST00000317677 SHISA4Q96DD7 197 aa15.02■□□□□ -0
CPNE1-201ENST00000317677 SLC26A6Q9BXS9 759 aa15.02■□□□□ -0
CPNE1-201ENST00000317677 KCNF1Q9H3M0 494 aa15.02■□□□□ -0
CPNE1-201ENST00000317677 IL17RBQ9NRM6 502 aa15.02■□□□□ -0
CPNE1-201ENST00000317677 RCOR1Q9UKL0 485 aa15.02■□□□□ -0
CPNE1-201ENST00000317677 F8W031 263 aaPredicted RBP15.02□□□□□ -0.01
CPNE1-201ENST00000317677 CYP2C19P33261 490 aa15.02□□□□□ -0.01
CPNE1-201ENST00000317677 CEBPZQ03701 1054 aaKnown RBP15.02□□□□□ -0.01
CPNE1-201ENST00000317677 FUT2Q10981 343 aa15.02□□□□□ -0.01
CPNE1-201ENST00000317677 IFIT1BQ5T764 474 aaKnown RBP15.02□□□□□ -0.01
CPNE1-201ENST00000317677 ARHGAP27Q6ZUM4 889 aa15.02□□□□□ -0.01
CPNE1-201ENST00000317677 CRACR2BQ8N4Y2 399 aaPredicted RBP15.02□□□□□ -0.01
CPNE1-201ENST00000317677 ZNF397Q8NF99 534 aaPredicted RBP15.02□□□□□ -0.01
CPNE1-201ENST00000317677 NOL10Q9BSC4 688 aaKnown RBP15.02□□□□□ -0.01
CPNE1-201ENST00000317677 TRIM34Q9BYJ4 488 aa15.02□□□□□ -0.01
CPNE1-201ENST00000317677 PYCARDQ9ULZ3 195 aa15.02□□□□□ -0.01
CPNE1-201ENST00000317677 SSRP1Q08945 709 aaKnown RBP15.01□□□□□ -0.01
CPNE1-201ENST00000317677 CCDC183Q5T5S1 534 aa15.01□□□□□ -0.01
CPNE1-201ENST00000317677 CPLX2Q6PUV4 134 aaKnown RBP15.01□□□□□ -0.01
CPNE1-201ENST00000317677 IQCA1Q86XH1 822 aa15.01□□□□□ -0.01
CPNE1-201ENST00000317677 PLEKHA8P1O95397 391 aa15□□□□□ -0.01
CPNE1-201ENST00000317677 POLR3DP05423 398 aaPredicted RBP15□□□□□ -0.01
CPNE1-201ENST00000317677 SLC3A2P08195 630 aaKnown RBP15□□□□□ -0.01
CPNE1-201ENST00000317677 PDE4BQ07343 736 aa15□□□□□ -0.01
CPNE1-201ENST00000317677 CCDC82Q8N4S0 544 aa15□□□□□ -0.01
CPNE1-201ENST00000317677 CNKSR1Q969H4 720 aa15□□□□□ -0.01
CPNE1-201ENST00000317677 EYA3Q99504 573 aa15□□□□□ -0.01
CPNE1-201ENST00000317677 TTF2Q9UNY4 1162 aaKnown RBP15□□□□□ -0.01
CPNE1-201ENST00000317677 SUGT1Q9Y2Z0 365 aa15□□□□□ -0.01
CPNE1-201ENST00000317677 TFAP4Q01664 338 aa15□□□□□ -0.01
CPNE1-201ENST00000317677 PSME4Q14997 1843 aa14.99□□□□□ -0.01
CPNE1-201ENST00000317677 TSPY2A6NKD2 308 aa14.99□□□□□ -0.01
CPNE1-201ENST00000317677 PLCG2P16885 1265 aa14.99□□□□□ -0.01
CPNE1-201ENST00000317677 RASA1P20936 1047 aa14.99□□□□□ -0.01
CPNE1-201ENST00000317677 SCNN1DP51172 638 aa14.99□□□□□ -0.01
CPNE1-201ENST00000317677 MYSM1Q5VVJ2 828 aa14.99□□□□□ -0.01
CPNE1-201ENST00000317677 CERS3Q8IU89 383 aa14.99□□□□□ -0.01
CPNE1-201ENST00000317677 SLF2Q8IX21 1173 aa14.99□□□□□ -0.01
CPNE1-201ENST00000317677 DDX4Q9NQI0 724 aaKnown RBP14.99□□□□□ -0.01
CPNE1-201ENST00000317677 CFAP45Q9UL16 551 aa14.99□□□□□ -0.01
CPNE1-201ENST00000317677 TAOK2Q9UL54 1235 aa14.99□□□□□ -0.01
CPNE1-201ENST00000317677 PCDHAC2Q9Y5I4 1007 aa14.99□□□□□ -0.01
CPNE1-201ENST00000317677 CLIC4Q9Y696 253 aa14.99□□□□□ -0.01
CPNE1-201ENST00000317677 USP17L3A6NCW0 530 aa14.98□□□□□ -0.01
CPNE1-201ENST00000317677 USP17L4A6NCW7 530 aa14.98□□□□□ -0.01
CPNE1-201ENST00000317677 ECE2O60344 883 aa14.98□□□□□ -0.01
CPNE1-201ENST00000317677 WDHD1O75717 1129 aaPredicted RBP14.98□□□□□ -0.01
CPNE1-201ENST00000317677 PKN1Q16512 942 aa14.98□□□□□ -0.01
CPNE1-201ENST00000317677 USP17L1Q7RTZ2 530 aa14.98□□□□□ -0.01
CPNE1-201ENST00000317677 PODNQ7Z5L7 613 aa14.98□□□□□ -0.01
CPNE1-201ENST00000317677 SIPA1L1O43166 1804 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms