RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 MAP3K21Q5TCX8 1036 aa21.2■□□□□ 0.98
EXOSC4-201ENST00000316052 GPR142Q7Z601 462 aa21.2■□□□□ 0.98
EXOSC4-201ENST00000316052 FEZ1Q99689 392 aa21.2■□□□□ 0.98
EXOSC4-201ENST00000316052 ZBTB40Q9NUA8 1239 aa21.2■□□□□ 0.98
EXOSC4-201ENST00000316052 COG6Q9Y2V7 657 aa21.2■□□□□ 0.98
EXOSC4-201ENST00000316052 TCRBV5S4A2TA0A5A2 114 aa21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 USP17L15C9J2P7 530 aa21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 USP17L13C9JLJ4 530 aa21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 USP17L11C9JVI0 530 aa21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 USP17L18D6R9N7 530 aa21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 USP17L22D6RA61 530 aa21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 USP17L17D6RBQ6 530 aa21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 USP17L19D6RCP7 530 aa21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 USP17L20D6RJB6 530 aa21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 PRKAR2AP13861 404 aaKnown RBP21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 GABPAQ06546 454 aa21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 USP17L24Q0WX57 530 aa21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 MORN1Q5T089 497 aa21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 CATSPERGQ6ZRH7 1159 aa21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 RPAP2Q8IXW5 612 aaPredicted RBP21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 CLASRPQ8N2M8 674 aaKnown RBP21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 ANKLE1Q8NAG6 615 aa21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 GTF3C2Q8WUA4 911 aaPredicted RBP21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 SOCS4Q8WXH5 440 aa21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 KIF1BPQ96EK5 621 aa21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 EDC3Q96F86 508 aaKnown RBP21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 KIAA1683Q9H0B3 1180 aa21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 BCL11AQ9H165 835 aa21.19■□□□□ 0.98
EXOSC4-201ENST00000316052 DDX60LQ5H9U9 1706 aaKnown RBP21.18■□□□□ 0.98
EXOSC4-201ENST00000316052 GOLIM4O00461 696 aa21.18■□□□□ 0.98
EXOSC4-201ENST00000316052 POLR3DP05423 398 aaPredicted RBP21.18■□□□□ 0.98
EXOSC4-201ENST00000316052 MS4A1P11836 297 aa21.18■□□□□ 0.98
EXOSC4-201ENST00000316052 CCL14Q16627 93 aa21.18■□□□□ 0.98
EXOSC4-201ENST00000316052 PLEKHH3Q7Z736 793 aa21.18■□□□□ 0.98
EXOSC4-201ENST00000316052 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.18■□□□□ 0.98
EXOSC4-201ENST00000316052 DNAJC2Q99543 621 aaKnown RBP21.18■□□□□ 0.98
EXOSC4-201ENST00000316052 OGDHLQ9ULD0 1010 aa21.18■□□□□ 0.98
EXOSC4-201ENST00000316052 RABGAP1Q9Y3P9 1069 aa21.18■□□□□ 0.98
EXOSC4-201ENST00000316052 ZNF532Q9HCE3 1301 aa21.18■□□□□ 0.98
EXOSC4-201ENST00000316052 VCAM1P19320 739 aa21.17■□□□□ 0.98
EXOSC4-201ENST00000316052 USP14P54578 494 aa21.17■□□□□ 0.98
EXOSC4-201ENST00000316052 CACNB2Q08289 660 aaPredicted RBP21.17■□□□□ 0.98
EXOSC4-201ENST00000316052 PDE3AQ14432 1141 aa21.17■□□□□ 0.98
EXOSC4-201ENST00000316052 SEPT2Q15019 361 aa21.17■□□□□ 0.98
EXOSC4-201ENST00000316052 SLFNL1Q499Z3 407 aa21.17■□□□□ 0.98
EXOSC4-201ENST00000316052 CCAR1Q8IX12 1150 aaKnown RBP21.17■□□□□ 0.98
EXOSC4-201ENST00000316052 CRNKL1Q9BZJ0 848 aaKnown RBP21.17■□□□□ 0.98
EXOSC4-201ENST00000316052 CABP5Q9NP86 173 aa21.17■□□□□ 0.98
EXOSC4-201ENST00000316052 MCM9Q9NXL9 1143 aa21.17■□□□□ 0.98
EXOSC4-201ENST00000316052 NAV1Q8NEY1 1877 aa21.16■□□□□ 0.98
EXOSC4-201ENST00000316052 IFIT2P09913 472 aaKnown RBP21.16■□□□□ 0.98
EXOSC4-201ENST00000316052 LCORLQ8N3X6 602 aa21.16■□□□□ 0.98
EXOSC4-201ENST00000316052 SDR42E1Q8WUS8 393 aa21.16■□□□□ 0.98
EXOSC4-201ENST00000316052 NBPF3Q9H094 633 aa21.16■□□□□ 0.98
EXOSC4-201ENST00000316052 STAP2Q9UGK3 403 aa21.16■□□□□ 0.98
EXOSC4-201ENST00000316052 DDX19BQ9UMR2 479 aa21.16■□□□□ 0.98
EXOSC4-201ENST00000316052 HMMRO75330 724 aa21.15■□□□□ 0.98
EXOSC4-201ENST00000316052 CYP2D6P10635 497 aa21.15■□□□□ 0.98
EXOSC4-201ENST00000316052 ZKSCAN1P17029 563 aaPredicted RBP21.15■□□□□ 0.98
EXOSC4-201ENST00000316052 RGS2P41220 211 aa21.15■□□□□ 0.98
EXOSC4-201ENST00000316052 TRMT44Q8IYL2 757 aaKnown RBP21.15■□□□□ 0.98
EXOSC4-201ENST00000316052 DCP1AQ9NPI6 582 aaPredicted RBP21.15■□□□□ 0.98
EXOSC4-201ENST00000316052 BTBD7Q9P203 1132 aa21.15■□□□□ 0.98
EXOSC4-201ENST00000316052 A0A1W2PRG0 241 aa21.14■□□□□ 0.97
EXOSC4-201ENST00000316052 CCND3P30281 292 aaPredicted RBP21.14■□□□□ 0.97
EXOSC4-201ENST00000316052 BOLA2Q9H3K6 86 aa21.14■□□□□ 0.97
EXOSC4-201ENST00000316052 RPAP3Q9H6T3 665 aaPredicted RBP21.14■□□□□ 0.97
EXOSC4-201ENST00000316052 COL6A3P12111 3177 aa21.14■□□□□ 0.97
EXOSC4-201ENST00000316052 PRKAB2O43741 272 aa21.13■□□□□ 0.97
EXOSC4-201ENST00000316052 RAB11FIP3O75154 756 aa21.13■□□□□ 0.97
EXOSC4-201ENST00000316052 MAP2K5Q13163 448 aa21.13■□□□□ 0.97
EXOSC4-201ENST00000316052 LHX8Q68G74 356 aa21.13■□□□□ 0.97
EXOSC4-201ENST00000316052 LBX2Q6XYB7 198 aa21.13■□□□□ 0.97
EXOSC4-201ENST00000316052 C7orf61Q8IZ16 206 aa21.13■□□□□ 0.97
EXOSC4-201ENST00000316052 SLC44A5Q8NCS7 719 aa21.13■□□□□ 0.97
EXOSC4-201ENST00000316052 APBA2Q99767 749 aa21.13■□□□□ 0.97
EXOSC4-201ENST00000316052 C11orf49Q9H6J7 331 aa21.13■□□□□ 0.97
EXOSC4-201ENST00000316052 ARMT1Q9H993 441 aa21.13■□□□□ 0.97
EXOSC4-201ENST00000316052 FLRT1Q9NZU1 646 aa21.13■□□□□ 0.97
EXOSC4-201ENST00000316052 LAMA2P24043 3122 aaKnown RBP21.12■□□□□ 0.97
EXOSC4-201ENST00000316052 BAZ2AQ9UIF9 1905 aaKnown RBP21.12■□□□□ 0.97
EXOSC4-201ENST00000316052 SPDYE16A6NNV3 312 aaPredicted RBP21.12■□□□□ 0.97
EXOSC4-201ENST00000316052 MPHOSPH10O00566 681 aaKnown RBP21.12■□□□□ 0.97
EXOSC4-201ENST00000316052 CHGBP05060 677 aa21.12■□□□□ 0.97
EXOSC4-201ENST00000316052 CCNA1P78396 465 aa21.12■□□□□ 0.97
EXOSC4-201ENST00000316052 KIAA1755Q5JYT7 1200 aa21.12■□□□□ 0.97
EXOSC4-201ENST00000316052 DYNLL2Q96FJ2 89 aa21.12■□□□□ 0.97
EXOSC4-201ENST00000316052 PAG1Q9NWQ8 432 aa21.12■□□□□ 0.97
EXOSC4-201ENST00000316052 ZMYND8Q9ULU4 1186 aaPredicted RBP21.12■□□□□ 0.97
EXOSC4-201ENST00000316052 A0A0C4DFX4 3053 aa21.11■□□□□ 0.97
EXOSC4-201ENST00000316052 PFASO15067 1338 aa21.11■□□□□ 0.97
EXOSC4-201ENST00000316052 SMIM22K7EJ46 135 aa21.11■□□□□ 0.97
EXOSC4-201ENST00000316052 ATP5JP18859 108 aa21.11■□□□□ 0.97
EXOSC4-201ENST00000316052 PTPREP23469 700 aa21.11■□□□□ 0.97
EXOSC4-201ENST00000316052 ADD2P35612 726 aa21.11■□□□□ 0.97
EXOSC4-201ENST00000316052 WDR78Q5VTH9 848 aa21.11■□□□□ 0.97
EXOSC4-201ENST00000316052 CWC22Q9HCG8 908 aaKnown RBP21.11■□□□□ 0.97
EXOSC4-201ENST00000316052 RLFQ13129 1914 aa21.11■□□□□ 0.97
EXOSC4-201ENST00000316052 SLC15A5A6NIM6 579 aa21.1■□□□□ 0.97
EXOSC4-201ENST00000316052 SOX1O00570 391 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms