RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 PPP2R2CQ9Y2T4 447 aa17.26■□□□□ 0.35
CSDC2-201ENST00000306149 DOT1LQ8TEK3 1739 aa17.26■□□□□ 0.35
CSDC2-201ENST00000306149 USP17L12C9JPN9 530 aa17.26■□□□□ 0.35
CSDC2-201ENST00000306149 USP17L21D6R901 530 aa17.26■□□□□ 0.35
CSDC2-201ENST00000306149 FUT2Q10981 343 aa17.26■□□□□ 0.35
CSDC2-201ENST00000306149 FAM47AQ5JRC9 791 aa17.26■□□□□ 0.35
CSDC2-201ENST00000306149 ANKRD18AQ8IVF6 992 aa17.26■□□□□ 0.35
CSDC2-201ENST00000306149 TC2NQ8N9U0 490 aa17.26■□□□□ 0.35
CSDC2-201ENST00000306149 ZNF579Q8NAF0 562 aaKnown RBP17.26■□□□□ 0.35
CSDC2-201ENST00000306149 ENOX1Q8TC92 643 aaKnown RBP17.26■□□□□ 0.35
CSDC2-201ENST00000306149 CDC5LQ99459 802 aaKnown RBP17.26■□□□□ 0.35
CSDC2-201ENST00000306149 DESI2Q9BSY9 194 aa17.26■□□□□ 0.35
CSDC2-201ENST00000306149 CEP131Q9UPN4 1083 aa17.26■□□□□ 0.35
CSDC2-201ENST00000306149 VWA3AA6NCI4 1184 aa17.25■□□□□ 0.35
CSDC2-201ENST00000306149 TEX33O43247 280 aa17.25■□□□□ 0.35
CSDC2-201ENST00000306149 VEGFAP15692 232 aaPredicted RBP17.25■□□□□ 0.35
CSDC2-201ENST00000306149 CD44P16070 742 aaKnown RBP17.25■□□□□ 0.35
CSDC2-201ENST00000306149 KRT2P35908 639 aa17.25■□□□□ 0.35
CSDC2-201ENST00000306149 TBX2Q13207 712 aaPredicted RBP17.25■□□□□ 0.35
CSDC2-201ENST00000306149 CATIPQ7Z7H3 387 aa17.25■□□□□ 0.35
CSDC2-201ENST00000306149 SYMPKQ92797 1274 aaKnown RBP17.25■□□□□ 0.35
CSDC2-201ENST00000306149 PHF20Q9BVI0 1012 aa17.25■□□□□ 0.35
CSDC2-201ENST00000306149 NHSL1Q5SYE7 1610 aa17.25■□□□□ 0.35
CSDC2-201ENST00000306149 SPECC1LQ69YQ0 1117 aa17.25■□□□□ 0.35
CSDC2-201ENST00000306149 CPLX3Q8WVH0 158 aa17.25■□□□□ 0.35
CSDC2-201ENST00000306149 CELF1Q92879 486 aaKnown RBP17.25■□□□□ 0.35
CSDC2-201ENST00000306149 ADAMTS3O15072 1205 aa17.24■□□□□ 0.35
CSDC2-201ENST00000306149 SLFN14P0C7P3 912 aa17.24■□□□□ 0.35
CSDC2-201ENST00000306149 ARHGAP29Q52LW3 1261 aa17.24■□□□□ 0.35
CSDC2-201ENST00000306149 CTR9Q6PD62 1173 aa17.24■□□□□ 0.35
CSDC2-201ENST00000306149 FAM84BQ96KN1 310 aaPredicted RBP17.24■□□□□ 0.35
CSDC2-201ENST00000306149 GNL3LQ9NVN8 582 aaKnown RBP17.24■□□□□ 0.35
CSDC2-201ENST00000306149 ANAPC4Q9UJX5 808 aa17.24■□□□□ 0.35
CSDC2-201ENST00000306149 ZNF804BA4D1E1 1349 aa17.24■□□□□ 0.35
CSDC2-201ENST00000306149 ARHGAP6O43182 974 aa17.24■□□□□ 0.35
CSDC2-201ENST00000306149 XBP1P17861 261 aa17.24■□□□□ 0.35
CSDC2-201ENST00000306149 TROAPQ12815 778 aa17.24■□□□□ 0.35
CSDC2-201ENST00000306149 MTF1Q14872 753 aa17.24■□□□□ 0.35
CSDC2-201ENST00000306149 WDR24Q96S15 920 aa17.24■□□□□ 0.35
CSDC2-201ENST00000306149 EPC1Q9H2F5 836 aa17.24■□□□□ 0.35
CSDC2-201ENST00000306149 ST7Q9NRC1 585 aa17.24■□□□□ 0.35
CSDC2-201ENST00000306149 MINPP1Q9UNW1 487 aa17.24■□□□□ 0.35
CSDC2-201ENST00000306149 RTL9Q8NET4 1388 aa17.24■□□□□ 0.35
CSDC2-201ENST00000306149 PLCH1Q4KWH8 1693 aa17.24■□□□□ 0.35
CSDC2-201ENST00000306149 CAVIN4Q5BKX8 364 aa17.23■□□□□ 0.35
CSDC2-201ENST00000306149 NUTM2AQ8IVF1 878 aaPredicted RBP17.23■□□□□ 0.35
CSDC2-201ENST00000306149 PAGE5Q96GU1 130 aa17.23■□□□□ 0.35
CSDC2-201ENST00000306149 CARD6Q9BX69 1037 aa17.23■□□□□ 0.35
CSDC2-201ENST00000306149 AATFQ9NY61 560 aaKnown RBP eCLIP17.23■□□□□ 0.35
CSDC2-201ENST00000306149 TFCP2L1Q9NZI6 479 aa17.23■□□□□ 0.35
CSDC2-201ENST00000306149 BCL9LQ86UU0 1499 aa17.23■□□□□ 0.35
CSDC2-201ENST00000306149 CYP2D6P10635 497 aa17.23■□□□□ 0.35
CSDC2-201ENST00000306149 GTF2E1P29083 439 aaPredicted RBP17.23■□□□□ 0.35
CSDC2-201ENST00000306149 PLCD1P51178 756 aa17.23■□□□□ 0.35
CSDC2-201ENST00000306149 ZNF771Q7L3S4 317 aaPredicted RBP17.23■□□□□ 0.35
CSDC2-201ENST00000306149 IQCA1Q86XH1 822 aa17.23■□□□□ 0.35
CSDC2-201ENST00000306149 SRRTQ9BXP5 876 aaKnown RBP17.23■□□□□ 0.35
CSDC2-201ENST00000306149 DACH1Q9UI36 760 aa17.23■□□□□ 0.35
CSDC2-201ENST00000306149 PRPF3O43395 683 aaKnown RBP17.23■□□□□ 0.35
CSDC2-201ENST00000306149 GNG11P61952 73 aa17.23■□□□□ 0.35
CSDC2-201ENST00000306149 TERF2Q15554 542 aa17.23■□□□□ 0.35
CSDC2-201ENST00000306149 SPATA20Q8TB22 786 aa17.23■□□□□ 0.35
CSDC2-201ENST00000306149 MTA3Q9BTC8 594 aa17.23■□□□□ 0.35
CSDC2-201ENST00000306149 CICQ96RK0 1608 aaPredicted RBP17.22■□□□□ 0.35
CSDC2-201ENST00000306149 ZSCAN12O43309 604 aa17.22■□□□□ 0.35
CSDC2-201ENST00000306149 KARSQ15046 597 aaKnown RBP17.22■□□□□ 0.35
CSDC2-201ENST00000306149 KANK3Q6NY19 840 aa17.22■□□□□ 0.35
CSDC2-201ENST00000306149 SRBD1Q8N5C6 995 aaKnown RBP17.22■□□□□ 0.35
CSDC2-201ENST00000306149 IRX2Q9BZI1 471 aaPredicted RBP17.22■□□□□ 0.35
CSDC2-201ENST00000306149 BLZF1Q9H2G9 400 aa17.22■□□□□ 0.35
CSDC2-201ENST00000306149 PARP3Q9Y6F1 533 aa17.22■□□□□ 0.35
CSDC2-201ENST00000306149 COL22A1Q8NFW1 1626 aaPredicted RBP17.22■□□□□ 0.35
CSDC2-201ENST00000306149 RCAN1P53805 252 aa17.22■□□□□ 0.35
CSDC2-201ENST00000306149 PTGDRQ13258 359 aa17.22■□□□□ 0.35
CSDC2-201ENST00000306149 NR1I3Q14994 352 aa17.22■□□□□ 0.35
CSDC2-201ENST00000306149 NPY5RQ15761 445 aa17.22■□□□□ 0.35
CSDC2-201ENST00000306149 CLCN6P51797 869 aa17.21■□□□□ 0.35
CSDC2-201ENST00000306149 FAM193AP78312 1265 aa17.21■□□□□ 0.35
CSDC2-201ENST00000306149 BMS1Q14692 1282 aaKnown RBP17.21■□□□□ 0.35
CSDC2-201ENST00000306149 TRIML1Q8N9V2 468 aa17.21■□□□□ 0.35
CSDC2-201ENST00000306149 MNS1Q8NEH6 495 aa17.21■□□□□ 0.35
CSDC2-201ENST00000306149 A0A0U1RQJ8 604 aa17.21■□□□□ 0.35
CSDC2-201ENST00000306149 MECOMQ03112 1051 aa17.21■□□□□ 0.35
CSDC2-201ENST00000306149 UBE4AQ14139 1066 aa17.21■□□□□ 0.35
CSDC2-201ENST00000306149 PIK3AP1Q6ZUJ8 805 aa17.21■□□□□ 0.35
CSDC2-201ENST00000306149 ATRIPQ8WXE1 791 aa17.21■□□□□ 0.35
CSDC2-201ENST00000306149 UBXN4Q92575 508 aa17.21■□□□□ 0.35
CSDC2-201ENST00000306149 BSDC1Q9NW68 430 aaPredicted RBP17.21■□□□□ 0.35
CSDC2-201ENST00000306149 SOWAHDA6NJG2 315 aa17.2■□□□□ 0.34
CSDC2-201ENST00000306149 PRDX5P30044 214 aa17.2■□□□□ 0.34
CSDC2-201ENST00000306149 CDC25AP30304 524 aa17.2■□□□□ 0.34
CSDC2-201ENST00000306149 TTC38Q5R3I4 469 aa17.2■□□□□ 0.34
CSDC2-201ENST00000306149 TMTC3Q6ZXV5 915 aa17.2■□□□□ 0.34
CSDC2-201ENST00000306149 PHLPP1O60346 1717 aa17.2■□□□□ 0.34
CSDC2-201ENST00000306149 SPATA31A1Q5TZJ5 1347 aa17.2■□□□□ 0.34
CSDC2-201ENST00000306149 COL14A1Q05707 1796 aaKnown RBP17.2■□□□□ 0.34
CSDC2-201ENST00000306149 STX10O60499 249 aa17.2■□□□□ 0.34
CSDC2-201ENST00000306149 APTXQ7Z2E3 356 aaKnown RBP17.2■□□□□ 0.34
CSDC2-201ENST00000306149 CREBRFQ8IUR6 639 aa17.2■□□□□ 0.34
CSDC2-201ENST00000306149 NSUN4Q96CB9 384 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms