RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 TRIM58Q8NG06 486 aa16.41■□□□□ 0.22
SCN3B-201ENST00000299333 PPP4R1Q8TF05 950 aa16.41■□□□□ 0.22
SCN3B-201ENST00000299333 SPDL1Q96EA4 605 aa16.41■□□□□ 0.22
SCN3B-201ENST00000299333 PKD2L1Q9P0L9 805 aa16.41■□□□□ 0.22
SCN3B-201ENST00000299333 DCAF8L1A6NGE4 600 aa16.41■□□□□ 0.22
SCN3B-201ENST00000299333 CCNT1O60563 726 aaKnown RBP16.41■□□□□ 0.22
SCN3B-201ENST00000299333 PTPROQ16827 1216 aa16.41■□□□□ 0.22
SCN3B-201ENST00000299333 NLRC4Q9NPP4 1024 aa16.41■□□□□ 0.22
SCN3B-201ENST00000299333 NESP48681 1621 aa16.4■□□□□ 0.22
SCN3B-201ENST00000299333 DEXIO95424 95 aa16.4■□□□□ 0.22
SCN3B-201ENST00000299333 ETF1P62495 437 aaKnown RBP16.4■□□□□ 0.22
SCN3B-201ENST00000299333 ARMC9Q7Z3E5 817 aa16.4■□□□□ 0.22
SCN3B-201ENST00000299333 ATP2A3Q93084 1043 aa16.4■□□□□ 0.22
SCN3B-201ENST00000299333 OTUD7AQ8TE49 926 aaPredicted RBP16.4■□□□□ 0.22
SCN3B-201ENST00000299333 STAMQ92783 540 aa16.4■□□□□ 0.22
SCN3B-201ENST00000299333 SIRT1Q96EB6 747 aa16.4■□□□□ 0.22
SCN3B-201ENST00000299333 TBC1D7Q9P0N9 293 aa16.4■□□□□ 0.22
SCN3B-201ENST00000299333 HYOU1Q9Y4L1 999 aa16.4■□□□□ 0.22
SCN3B-201ENST00000299333 ZKSCAN8Q15776 578 aaPredicted RBP16.4■□□□□ 0.22
SCN3B-201ENST00000299333 KSR2Q6VAB6 950 aa16.4■□□□□ 0.22
SCN3B-201ENST00000299333 CAPN12Q6ZSI9 719 aa16.4■□□□□ 0.22
SCN3B-201ENST00000299333 LLPHQ9BRT6 129 aaKnown RBP16.4■□□□□ 0.22
SCN3B-201ENST00000299333 BLZF1Q9H2G9 400 aa16.4■□□□□ 0.22
SCN3B-201ENST00000299333 AMFRQ9UKV5 643 aa16.4■□□□□ 0.22
SCN3B-201ENST00000299333 B4E1Z4 1266 aa16.4■□□□□ 0.22
SCN3B-201ENST00000299333 PALM2Q8IXS6 379 aa16.4■□□□□ 0.22
SCN3B-201ENST00000299333 DCUN1D2Q6PH85 259 aa16.39■□□□□ 0.21
SCN3B-201ENST00000299333 DIS3L2Q8IYB7 885 aaKnown RBP16.39■□□□□ 0.21
SCN3B-201ENST00000299333 IFNL2Q8IZJ0 200 aa16.39■□□□□ 0.21
SCN3B-201ENST00000299333 KRT12Q99456 494 aa16.39■□□□□ 0.21
SCN3B-201ENST00000299333 BUB1O43683 1085 aa16.39■□□□□ 0.21
SCN3B-201ENST00000299333 TXKP42681 527 aa16.39■□□□□ 0.21
SCN3B-201ENST00000299333 PHEXP78562 749 aa16.39■□□□□ 0.21
SCN3B-201ENST00000299333 DYMQ7RTS9 669 aa16.39■□□□□ 0.21
SCN3B-201ENST00000299333 RNF34Q969K3 372 aa16.39■□□□□ 0.21
SCN3B-201ENST00000299333 TEX13AQ9BXU3 409 aaPredicted RBP16.39■□□□□ 0.21
SCN3B-201ENST00000299333 PYCARDQ9ULZ3 195 aa16.39■□□□□ 0.21
SCN3B-201ENST00000299333 NCBP1Q09161 790 aaKnown RBP16.39■□□□□ 0.21
SCN3B-201ENST00000299333 CREB3O43889 395 aa16.39■□□□□ 0.21
SCN3B-201ENST00000299333 RPS6KA2Q15349 733 aa16.39■□□□□ 0.21
SCN3B-201ENST00000299333 SRGAP1Q7Z6B7 1085 aa16.39■□□□□ 0.21
SCN3B-201ENST00000299333 CCDC197Q8NCU1 140 aa16.39■□□□□ 0.21
SCN3B-201ENST00000299333 THEGQ9P2T0 379 aa16.39■□□□□ 0.21
SCN3B-201ENST00000299333 INPP1P49441 399 aa16.39■□□□□ 0.21
SCN3B-201ENST00000299333 TEX11Q8IYF3 940 aa16.39■□□□□ 0.21
SCN3B-201ENST00000299333 PALMDQ9NP74 551 aa16.39■□□□□ 0.21
SCN3B-201ENST00000299333 ATG3Q9NT62 314 aa16.39■□□□□ 0.21
SCN3B-201ENST00000299333 SOS1Q07889 1333 aaPredicted RBP16.38■□□□□ 0.21
SCN3B-201ENST00000299333 CCDC169A6NNP5 214 aa16.38■□□□□ 0.21
SCN3B-201ENST00000299333 BSPRYQ5W0U4 402 aa16.38■□□□□ 0.21
SCN3B-201ENST00000299333 A0A087WUV0 522 aaPredicted RBP16.38■□□□□ 0.21
SCN3B-201ENST00000299333 WDR46O15213 610 aaKnown RBP16.38■□□□□ 0.21
SCN3B-201ENST00000299333 TTC38Q5R3I4 469 aa16.38■□□□□ 0.21
SCN3B-201ENST00000299333 TSPYL6Q8N831 410 aa16.38■□□□□ 0.21
SCN3B-201ENST00000299333 CCDC51Q96ER9 411 aa16.38■□□□□ 0.21
SCN3B-201ENST00000299333 KDM2BQ8NHM5 1336 aa16.38■□□□□ 0.21
SCN3B-201ENST00000299333 IFNAR2P48551 515 aa16.38■□□□□ 0.21
SCN3B-201ENST00000299333 NELFCDQ8IXH7 590 aa16.38■□□□□ 0.21
SCN3B-201ENST00000299333 BACH1O14867 736 aa16.38■□□□□ 0.21
SCN3B-201ENST00000299333 PARP1P09874 1014 aaKnown RBP16.37■□□□□ 0.21
SCN3B-201ENST00000299333 RSPH3Q86UC2 560 aa16.37■□□□□ 0.21
SCN3B-201ENST00000299333 GABPB2Q8TAK5 448 aaPredicted RBP16.37■□□□□ 0.21
SCN3B-201ENST00000299333 MAPKBP1O60336 1514 aa16.37■□□□□ 0.21
SCN3B-201ENST00000299333 APOEP02649 317 aa16.37■□□□□ 0.21
SCN3B-201ENST00000299333 HELLSQ9NRZ9 838 aa16.37■□□□□ 0.21
SCN3B-201ENST00000299333 SUN1O94901 812 aa16.37■□□□□ 0.21
SCN3B-201ENST00000299333 ADCY8P40145 1251 aa16.37■□□□□ 0.21
SCN3B-201ENST00000299333 CWF19L2Q2TBE0 894 aaKnown RBP16.37■□□□□ 0.21
SCN3B-201ENST00000299333 V9GY48 417 aaPredicted RBP16.37■□□□□ 0.21
SCN3B-201ENST00000299333 ANKRD36BQ8N2N9 1353 aa16.37■□□□□ 0.21
SCN3B-201ENST00000299333 TAF11Q15544 211 aa16.37■□□□□ 0.21
SCN3B-201ENST00000299333 ADAT2Q7Z6V5 191 aaKnown RBP16.37■□□□□ 0.21
SCN3B-201ENST00000299333 CCDC84Q86UT8 332 aaPredicted RBP16.37■□□□□ 0.21
SCN3B-201ENST00000299333 U2AF1L4Q8WU68 220 aaKnown RBP16.37■□□□□ 0.21
SCN3B-201ENST00000299333 WASLO00401 505 aaPredicted RBP16.36■□□□□ 0.21
SCN3B-201ENST00000299333 MAIP1Q8WWC4 291 aa16.36■□□□□ 0.21
SCN3B-201ENST00000299333 BICC1Q9H694 974 aaKnown RBP16.36■□□□□ 0.21
SCN3B-201ENST00000299333 ADGRF5Q8IZF2 1346 aa16.36■□□□□ 0.21
SCN3B-201ENST00000299333 CUL4BQ13620 913 aa16.36■□□□□ 0.21
SCN3B-201ENST00000299333 OR8K1Q8NGG5 319 aa16.36■□□□□ 0.21
SCN3B-201ENST00000299333 THAP12O43422 761 aa16.36■□□□□ 0.21
SCN3B-201ENST00000299333 IFNB1P01574 187 aa16.36■□□□□ 0.21
SCN3B-201ENST00000299333 ABCB4P21439 1286 aa16.36■□□□□ 0.21
SCN3B-201ENST00000299333 ARHGAP44Q17R89 818 aa16.36■□□□□ 0.21
SCN3B-201ENST00000299333 HERC4Q5GLZ8 1057 aaPredicted RBP16.36■□□□□ 0.21
SCN3B-201ENST00000299333 SCOCQ9UIL1 159 aa16.36■□□□□ 0.21
SCN3B-201ENST00000299333 AMOTL2Q9Y2J4 779 aa16.36■□□□□ 0.21
SCN3B-201ENST00000299333 NUB1Q9Y5A7 615 aa16.36■□□□□ 0.21
SCN3B-201ENST00000299333 SBNO1A3KN83 1393 aa16.36■□□□□ 0.21
SCN3B-201ENST00000299333 LOC102724159A0A0B4J2E5 919 aa16.36■□□□□ 0.21
SCN3B-201ENST00000299333 DNAJC8O75937 253 aaPredicted RBP16.36■□□□□ 0.21
SCN3B-201ENST00000299333 SLC12A2P55011 1212 aa16.36■□□□□ 0.21
SCN3B-201ENST00000299333 PWP2Q15269 919 aaKnown RBP16.36■□□□□ 0.21
SCN3B-201ENST00000299333 NBPF14Q5TI25 921 aa16.36■□□□□ 0.21
SCN3B-201ENST00000299333 SCYL3Q8IZE3 742 aa16.36■□□□□ 0.21
SCN3B-201ENST00000299333 HELBQ8NG08 1087 aaPredicted RBP16.36■□□□□ 0.21
SCN3B-201ENST00000299333 LRRC8CQ8TDW0 803 aa16.36■□□□□ 0.21
SCN3B-201ENST00000299333 JAK2O60674 1132 aa16.36■□□□□ 0.21
SCN3B-201ENST00000299333 GFAPP14136 432 aa16.36■□□□□ 0.21
SCN3B-201ENST00000299333 FCHSD1Q86WN1 690 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms