RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 ATP7BP35670 1465 aa18.33■□□□□ 0.52
SNAPC4-201ENST00000298532 SPOPO43791 374 aa18.33■□□□□ 0.52
SNAPC4-201ENST00000298532 SEPT6Q14141 434 aa18.33■□□□□ 0.52
SNAPC4-201ENST00000298532 PIK3AP1Q6ZUJ8 805 aa18.33■□□□□ 0.52
SNAPC4-201ENST00000298532 NELFBQ8WX92 580 aa18.33■□□□□ 0.52
SNAPC4-201ENST00000298532 MCM9Q9NXL9 1143 aa18.33■□□□□ 0.52
SNAPC4-201ENST00000298532 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.33■□□□□ 0.52
SNAPC4-201ENST00000298532 EPB41P11171 864 aaKnown RBP18.32■□□□□ 0.52
SNAPC4-201ENST00000298532 TRIM58Q8NG06 486 aa18.32■□□□□ 0.52
SNAPC4-201ENST00000298532 NAP1L4Q99733 375 aaKnown RBP18.32■□□□□ 0.52
SNAPC4-201ENST00000298532 VCXQ9H320 206 aa18.32■□□□□ 0.52
SNAPC4-201ENST00000298532 PPP2R5BQ15173 497 aa18.32■□□□□ 0.52
SNAPC4-201ENST00000298532 RPS6KA1Q15418 735 aa18.32■□□□□ 0.52
SNAPC4-201ENST00000298532 SMARCC2Q8TAQ2 1214 aa18.32■□□□□ 0.52
SNAPC4-201ENST00000298532 CHAMP1Q96JM3 812 aa18.32■□□□□ 0.52
SNAPC4-201ENST00000298532 IFIH1Q9BYX4 1025 aaKnown RBP18.32■□□□□ 0.52
SNAPC4-201ENST00000298532 TNFAIP3P21580 790 aa18.32■□□□□ 0.52
SNAPC4-201ENST00000298532 CCDC38Q502W7 563 aa18.32■□□□□ 0.52
SNAPC4-201ENST00000298532 TRIM31Q9BZY9 425 aa18.32■□□□□ 0.52
SNAPC4-201ENST00000298532 COMMD10Q9Y6G5 202 aa18.32■□□□□ 0.52
SNAPC4-201ENST00000298532 CFAP65Q6ZU64 1925 aaKnown RBP18.32■□□□□ 0.52
SNAPC4-201ENST00000298532 GPAA1O43292 621 aa18.32■□□□□ 0.52
SNAPC4-201ENST00000298532 NOL3O60936 208 aaKnown RBP18.32■□□□□ 0.52
SNAPC4-201ENST00000298532 LIG3P49916 1009 aa18.32■□□□□ 0.52
SNAPC4-201ENST00000298532 BEND3Q5T5X7 828 aa18.32■□□□□ 0.52
SNAPC4-201ENST00000298532 UBL4BQ8N7F7 174 aa18.32■□□□□ 0.52
SNAPC4-201ENST00000298532 KIAA0232Q92628 1395 aa18.32■□□□□ 0.52
SNAPC4-201ENST00000298532 STX10O60499 249 aa18.31■□□□□ 0.52
SNAPC4-201ENST00000298532 ZNF274Q96GC6 653 aaPredicted RBP18.31■□□□□ 0.52
SNAPC4-201ENST00000298532 PPP1R13BQ96KQ4 1090 aa18.31■□□□□ 0.52
SNAPC4-201ENST00000298532 CFAP57Q96MR6 1250 aa18.31■□□□□ 0.52
SNAPC4-201ENST00000298532 DSCC1Q9BVC3 393 aa18.31■□□□□ 0.52
SNAPC4-201ENST00000298532 PDE11AQ9HCR9 933 aa18.31■□□□□ 0.52
SNAPC4-201ENST00000298532 TPCN1Q9ULQ1 816 aa18.31■□□□□ 0.52
SNAPC4-201ENST00000298532 V9GY48 417 aaPredicted RBP18.31■□□□□ 0.52
SNAPC4-201ENST00000298532 USP19O94966 1318 aa18.31■□□□□ 0.52
SNAPC4-201ENST00000298532 SPDYE3A6NKU9 549 aa18.31■□□□□ 0.52
SNAPC4-201ENST00000298532 CMA1P23946 247 aa18.31■□□□□ 0.52
SNAPC4-201ENST00000298532 CLUL1Q15846 466 aa18.31■□□□□ 0.52
SNAPC4-201ENST00000298532 SPATA31E1Q6ZUB1 1445 aa18.31■□□□□ 0.52
SNAPC4-201ENST00000298532 CETN3O15182 167 aa18.31■□□□□ 0.52
SNAPC4-201ENST00000298532 NUCKS1Q9H1E3 243 aaKnown RBP18.31■□□□□ 0.52
SNAPC4-201ENST00000298532 HAUS4Q9H6D7 363 aa18.31■□□□□ 0.52
SNAPC4-201ENST00000298532 PPANQ9NQ55 473 aaKnown RBP18.31■□□□□ 0.52
SNAPC4-201ENST00000298532 SERTAD1Q9UHV2 236 aa18.31■□□□□ 0.52
SNAPC4-201ENST00000298532 NRBP1Q9UHY1 535 aa18.31■□□□□ 0.52
SNAPC4-201ENST00000298532 NSFL1CQ9UNZ2 370 aaKnown RBP18.31■□□□□ 0.52
SNAPC4-201ENST00000298532 RRP15Q9Y3B9 282 aaKnown RBP18.3■□□□□ 0.52
SNAPC4-201ENST00000298532 ERBB4Q15303 1308 aa18.3■□□□□ 0.52
SNAPC4-201ENST00000298532 TRIML1Q8N9V2 468 aa18.3■□□□□ 0.52
SNAPC4-201ENST00000298532 PHKBQ93100 1093 aa18.3■□□□□ 0.52
SNAPC4-201ENST00000298532 MAP3K4Q9Y6R4 1608 aa18.3■□□□□ 0.52
SNAPC4-201ENST00000298532 E7EWF7 191 aa18.3■□□□□ 0.52
SNAPC4-201ENST00000298532 MAP7D1Q3KQU3 841 aa18.3■□□□□ 0.52
SNAPC4-201ENST00000298532 APBB1IPQ7Z5R6 666 aaPredicted RBP18.3■□□□□ 0.52
SNAPC4-201ENST00000298532 SYCE1Q8N0S2 351 aa18.3■□□□□ 0.52
SNAPC4-201ENST00000298532 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.3■□□□□ 0.52
SNAPC4-201ENST00000298532 MCUR1Q96AQ8 359 aa18.3■□□□□ 0.52
SNAPC4-201ENST00000298532 METTL22Q9BUU2 404 aaPredicted RBP18.3■□□□□ 0.52
SNAPC4-201ENST00000298532 CD2BP2O95400 341 aaKnown RBP18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 ARHGAP24Q8N264 748 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 FRMD4BQ9Y2L6 1034 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 PFKFB2O60825 505 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 ALDH1B1P30837 517 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 INF2Q27J81 1249 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 ZNF365Q70YC5 407 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 SRGAP1Q7Z6B7 1085 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 UNC5CLQ8IV45 518 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 HELBQ8NG08 1087 aaPredicted RBP18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 KLHDC4Q8TBB5 520 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 SSH3Q8TE77 659 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 CCDC97Q96F63 343 aaPredicted RBP18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 CDC23Q9UJX2 597 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 AATKQ6ZMQ8 1374 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 CACTINQ8WUQ7 758 aaKnown RBP18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 HOOK2Q96ED9 719 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 VCX3BQ9H321 246 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 TXNDC16Q9P2K2 825 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 ROBO2Q9HCK4 1378 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 SYNMO15061 1565 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 KIF1BO60333 1816 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 ERCC5P28715 1186 aaPredicted RBP18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 PTH1RQ03431 593 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 CUL4AQ13619 759 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 HYOU1Q9Y4L1 999 aa18.29■□□□□ 0.52
SNAPC4-201ENST00000298532 FLOT1O75955 427 aa18.28■□□□□ 0.52
SNAPC4-201ENST00000298532 SLC8A1P32418 973 aa18.28■□□□□ 0.52
SNAPC4-201ENST00000298532 KLHL30Q0D2K2 578 aa18.28■□□□□ 0.52
SNAPC4-201ENST00000298532 CERS3Q8IU89 383 aa18.28■□□□□ 0.52
SNAPC4-201ENST00000298532 MIPOL1Q8TD10 442 aa18.28■□□□□ 0.52
SNAPC4-201ENST00000298532 ARHGEF2Q92974 986 aaKnown RBP18.28■□□□□ 0.52
SNAPC4-201ENST00000298532 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.28■□□□□ 0.52
SNAPC4-201ENST00000298532 MAST3O60307 1309 aa18.28■□□□□ 0.52
SNAPC4-201ENST00000298532 ATP5JP18859 108 aa18.28■□□□□ 0.52
SNAPC4-201ENST00000298532 FANCLQ9NW38 375 aa18.28■□□□□ 0.52
SNAPC4-201ENST00000298532 MICAL1Q8TDZ2 1067 aa18.28■□□□□ 0.52
SNAPC4-201ENST00000298532 CFAP157Q5JU67 520 aa18.28■□□□□ 0.52
SNAPC4-201ENST00000298532 PCDHA7Q9UN72 937 aa18.28■□□□□ 0.52
SNAPC4-201ENST00000298532 PDE8AO60658 829 aa18.27■□□□□ 0.52
SNAPC4-201ENST00000298532 CTNNA1P35221 906 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms